Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chalaropsis_20thielavioides_20[genbank_20GCA_5F001599435.1_202016-
03-01] 12 sequences; 23,333,049 total letters
Query= NC_010191.2
Length=186713
Score E
Sequences producing significant alignments: (Bits) Value
seq8 181 1e-40
seq4 154 2e-32
>seq8
Length=1110981
Score = 181 bits (200), Expect = 1e-40
Identities = 669/1031 (65%), Gaps = 24/1031 (2%)
Strand=Plus/Plus
Query 113903 TTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCAGATAGATATTGGTCGTGTATGGC 113962
|||||||| ||||| || || || || | | | || || |||| ||||| |||
Sbjct 323813 TTGACAACCTGGAACTCGCCGGCAAGAACACGGCGCTGGTAAATGTTGGAAGTGTAGGGC 323872
Query 113963 TCAAAGCACTCATTGTTACCCAAGATTTGGGCGGTGGAGGCTGTGGGCATGGGTGCCATG 114022
||||||||||| |||||||||| ||| || | || ||| |||||||||||||| |
Sbjct 323873 TCAAAGCACTCGTTGTTACCCAGGATCTGCGACGTACTGGCAGTGGGCATGGGTGCAACC 323932
Query 114023 AGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTCCTTGAGGGCGTCCCAGTCGTAG 114082
|| || ||| |||| ||| | | | |||| |||||||||| |||||| |
Sbjct 323933 AGGAGAGAGTTGCGGACACCGTGCTGCTTAATCTTCTCCTTGAGGGAAGTCCAGTCCCA- 323991
Query 114083 TTGAGC-TTTGTCTCCCCCTGCCACATATCAAACTGGAGGATACCTTGGGAGGCTGGCGA 114141
|| | | | | | | | |||||| ||||| || ||||| || || ||| | |||||
Sbjct 323992 AAGATCGCTGGGCGTCACATCCCACATGTCAAATTGCAGGATGCCCTGCGAGACCGGCGA 324051
Query 114142 TCCCTCAAATGTCTCGTATGGGCCCTCAACCTCCGCCAATTC---GGAGCTCGCCTCGAG 114198
|||||| | || ||||| ||||||| || || | || ||| ||| ||
Sbjct 324052 GCCCTCATAAGTAGAGTATGTGCCCTCAGTCTGGGCAATCTCCATTGAG---GCCGTCAG 324108
Query 114199 GGCTGCGTGATACATTGTCTCAAAAATGCGAGCATTCA-TTGCCTTGGCCTCGTCGGAAT 114257
|| ||||| || || ||||||||||| | |||| || | |||||| || |
Sbjct 324109 CGCAGCGTGGTAGATGGTCTCAAAAATCTGCTTGTTCAGCTGAC-GAGCCTCGGGAGACT 324167
Query 114258 CAAACGCGAGTCGGCACA-AAATAAATACATCCGCGAGACCTTGGACACCGAGGCCAATT 114316
|||| | | | ||| | | || |||| || ||||| |||||||||| |||||
Sbjct 324168 CAAAAG-GCATGCGCAGAGCCAGGAAGGCATCAGCCAGACCCTGGACACCGACACCAATC 324226
Query 114317 GGGCGATGTCTCATATTAGACTTTCGAGCGGTCTCC---ACGGGATAAAAATTCCTATCG 114373
||||| || | ||| || || | | || |||| || || || ||| |||
Sbjct 324227 GGGCGGTGGCGCATGTT--GCTGTTG-TAGGCCTCCGTGACAGGGTAGTGGTTCACATCA 324283
Query 114374 ATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGCTTTTCGTAATCA 114433
|| | | || || || | || |||| ||||| ||||||||||||| | | ||
Sbjct 324284 ATGATGCGGTTCAGGTTGCGGACAACGACCTGTGTGACTTCATGAAGCTTTCCAAAGTCG 324343
Query 114434 AAACTGCGAGTCTCTTCATTGACATACTTAGGAAGGGCGATTGACGCCAGATTACACACA 114493
| || | | | | ||| | || ||||| | || ||||| || ||||||
Sbjct 324344 TACTCGCCCTTGTTGTAGTCAACAAATGAGGGCAGGGCAAGAGAGGCCAGGTTGCACACA 324403
Query 114494 GAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTACACAAATTTGAACTCTTAATG 114553
| |||||| || |||||| ||||| || || |||| || || || ||||
Sbjct 324404 GCAACCTCATCGGGGGCACAGTACTCGATAATCTCAGTGCACAGGTTGGAGCTGCGAATG 324463
Query 114554 GTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAAAGCATGTATGGC 114613
|| |||| |||||| || || ||| ||| || |||||||||||||| | ||
Sbjct 324464 GTACCCAGGTTCTTCTGGTTGCTCTTGCGGTTGCAGCTGTCCTTGTAAAGCATAAAGGGA 324523
Query 114614 GTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCAGA-CATCGGCGGCTGG--CACA 114670
| || ||||| || |||| || ||||| || | ||| | | || | | | | ||
Sbjct 324524 TTGCCAGTCTCGGTCTGGGCCTCCAGAATGGCGTACCACAGCTTCTGAGCTTTGATAACC 324583
Query 114671 GTGGCGTTGGCTCGCCCCTCCTCCTCGTACTTTGTGTAGAGGGCTTCAAACTCTTCACCC 114730
| ||| | | || || |||| ||||||||| ||| || ||||||||||| || ||
Sbjct 324584 AT-GCG--GCCACGGCCTTCCTTTTCGTACTTTTCGTACAGAGCTTCAAACTCATCGCCG 324640
Query 114731 ACGGCCTCTGAGAGCCCTGGTGCCTTATCTGGGCAGAAGAGAGACCATTGACCACCCTCC 114790
| || | || || || || | ||||| | |||| ||| | | || |
Sbjct 324641 TAGCAGTCAGCCAGGCCGGGGCACTCGTTGGGGCACATCAGAGTCCAGTCCTCGTTCTTC 324700
Query 114791 TCAACACGCTTCATGAAGAGGTCTGGGATCCAGAGAGCTGAGAAGAGATCCCGACAGCGA 114850
||||||||||||||||| ||||| |||||| ||||| ||| | || || |||
Sbjct 324701 TCAACACGCTTCATGAACAGGTCGCAGATCCACAGAGCCAGGAACAAGTCGCGGGCACGA 324760
Query 114851 GCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCAC 114910
| ||||| | || || || |||| || | || || | | || ||||||||
Sbjct 324761 ACCTCTTCCTTTCCATGGTTCTTGCGCAGGTCAAGGAACTCAAACACGTCGGCGTGCCAG 324820
Query 114911 GGTTCCAGGTA 114921
|||||||||||
Sbjct 324821 GGTTCCAGGTA 324831
>seq4
Length=2525909
Score = 154 bits (170), Expect = 2e-32
Identities = 531/814 (65%), Gaps = 17/814 (2%)
Strand=Plus/Minus
Query 125758 GTAGTCCCCAACCCGCTTCTCGAAGAAGTTTGTCTTCCCGTCCAAGCT-GATATTCTCCA 125816
|||||| || || ||||||||||||||||| ||||| ||| || ||| ||| |||||||
Sbjct 2287327 GTAGTCGCCCACGCGCTTCTCGAAGAAGTTGGTCTTGCCG-CCGAGCGAGATGTTCTCCA 2287269
Query 125817 TAAAATCAAATGGGTTCTTTGAGTTCCAAAT-TGTTGGCACCCCAATCTGTTTGAGGAGA 125875
|||| ||||| ||||| | | | | | | || | || | | ||| ||
Sbjct 2287268 TAAAGTCAAAGGGGTTGGTGGCGCGGTAGACCTTTTCGTTTCCGAGGGCGAC-GAGCAGG 2287210
Query 125876 CGATCCGAGACGTACTCAATGTACTCAGACATCTTCTCAGAGTTCATACCGATGAGGTTA 125935
|| || | |||| |||||||||||| ||| || | |||||| |||| |||| |
Sbjct 2287209 CGGTCGGCGACGAACTCAATGTACTGCTTCATGAGGTCGGCGTTCATGCCGAGGAGGCCA 2287150
Query 125936 CATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATTTCCACGGCTTCCCGCACGATG-GC 125994
|| || || || || | |||| |||||||||| | || || || | ||| ||
Sbjct 2287149 CAGGGCAGGGCCTCGGTCAGGAACTCCTTCTCAATGACGACAGCATCGGTGATGATCTGC 2287090
Query 125995 GTGAATGGTGTCCACCCCAGGTCTATTGCGCAAAGTCTTGAAGAGTTCCACGGCAAACTC 126054
|| | | | | | || | ||| | | ||| || |||||| ||
Sbjct 2287089 TCGACTAGC-TGCTTGCTGGGGCGGTTGTTGAGGTGCGAGAACAGCAGACAGGCAAAGTC 2287031
Query 126055 TTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCCTGGCATGAG 126114
||| || ||||||||||| ||||| || || || |||||| ||| || ||||||||
Sbjct 2287030 GGTGTGCAGGCCCTCGTCACGCGAGATCAGCTCGTTGGAGAAGGTCAGGCCAGGCATGAG 2286971
Query 126115 ACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGATTCCCTCCAC 126174
|| ||||| || |||||| || | || | |||||||||||||| ||||| ||
Sbjct 2286970 GCCGCGCTTGCGCAGCCAGAAGATGGAGGCGAAAGCGCCCGAGAAGAAGATGCCCTCGAC 2286911
Query 126175 ACACGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGCGACT--TTGT-GTCAAACCACTT 126231
|| || || | || |||| ||||||| ||||| |||| | | ||||||
Sbjct 2286910 GGCGGCAAAGGCGACCAGGCGCTGGGCAAAGG---TCGACTCCTTGTCGGTGATCCACTT 2286854
Query 126232 CATCGCCCACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGCTTCAAAGAGTTC 126291
| ||||| | ||||| ||| ||||||| ||| | ||| || | ||||| |
Sbjct 2286853 GAGGGCCCAGTCGGCCTTGCGGCGGATGCACGGGATGGTATCGATGGCGTTGAAGAGGTA 2286794
Query 126292 CTTCTTTTCTGATGGATCTTTGATGTACTTATCTATGAGTTTTGAATATGTTTCGCCGTG 126351
| | || || || |||||||| | || || || || || || ||| |||
Sbjct 2286793 GGTGCGCTGCGAGGGCTCCTTGATGTAAGTGTCGATCAGCAGCGAGTACGTCTCGGAGTG 2286734
Query 126352 GACCAT-TTCATTATGGCACTGATACGCGTAGAAAGAGCGCGCTTCGCTTATCTGTACCT 126410
|| | | ||| || | ||| | ||||||| |||| || ||| ||||| ||||
Sbjct 2286733 GATGTTCTCCATCAT-GATCTGGAAGCCGTAGAAGCAGCGGGCCTCGGGGATCTGGACCT 2286675
Query 126411 CATCGGCAAAATTGTTATTGATATTCTCAAAAACAATTCCATCGGACCCAGCAAAAAACG 126470
| ||| ||| | || ||||| || || || ||||| | || || || |
Sbjct 2286674 CGCCGGAGAAACGCTCGACGAGGTTCTCGTTGACGATGCCGTCGGATGCGGCGAAGAAGG 2286615
Query 126471 CCAGGATATACTTTATGAATTTCTGTTCATTCTCGTTCA---GGGTCTTCCAGTCGTCAA 126527
| ||||| | | ||||| | |||||||| || ||||| || | |||||||||| ||
Sbjct 2286614 CGAGGATGTGCGAGATGAAGTACTGTTCATCCTTGTTCAGGCGGTTGTTCCAGTCGTGAA 2286555
Query 126528 GATCCTTCGAGAGATCTACCTCCTCCGCAGTCCA 126561
| ||||| || || || | ||||| ||||||||
Sbjct 2286554 GGTCCTTGGACAGGTCAATTTCCTCGGCAGTCCA 2286521
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 597353510396960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |