Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chalaropsis_20thielavioides_20[genbank_20GCA_5F001599435.1_202016- 03-01] 12 sequences; 23,333,049 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq8 181 1e-40 seq4 154 2e-32 >seq8 Length=1110981 Score = 181 bits (200), Expect = 1e-40 Identities = 669/1031 (65%), Gaps = 24/1031 (2%) Strand=Plus/Plus Query 113903 TTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCAGATAGATATTGGTCGTGTATGGC 113962 |||||||| ||||| || || || || | | | || || |||| ||||| ||| Sbjct 323813 TTGACAACCTGGAACTCGCCGGCAAGAACACGGCGCTGGTAAATGTTGGAAGTGTAGGGC 323872 Query 113963 TCAAAGCACTCATTGTTACCCAAGATTTGGGCGGTGGAGGCTGTGGGCATGGGTGCCATG 114022 ||||||||||| |||||||||| ||| || | || ||| |||||||||||||| | Sbjct 323873 TCAAAGCACTCGTTGTTACCCAGGATCTGCGACGTACTGGCAGTGGGCATGGGTGCAACC 323932 Query 114023 AGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTCCTTGAGGGCGTCCCAGTCGTAG 114082 || || ||| |||| ||| | | | |||| |||||||||| |||||| | Sbjct 323933 AGGAGAGAGTTGCGGACACCGTGCTGCTTAATCTTCTCCTTGAGGGAAGTCCAGTCCCA- 323991 Query 114083 TTGAGC-TTTGTCTCCCCCTGCCACATATCAAACTGGAGGATACCTTGGGAGGCTGGCGA 114141 || | | | | | | | |||||| ||||| || ||||| || || ||| | ||||| Sbjct 323992 AAGATCGCTGGGCGTCACATCCCACATGTCAAATTGCAGGATGCCCTGCGAGACCGGCGA 324051 Query 114142 TCCCTCAAATGTCTCGTATGGGCCCTCAACCTCCGCCAATTC---GGAGCTCGCCTCGAG 114198 |||||| | || ||||| ||||||| || || | || ||| ||| || Sbjct 324052 GCCCTCATAAGTAGAGTATGTGCCCTCAGTCTGGGCAATCTCCATTGAG---GCCGTCAG 324108 Query 114199 GGCTGCGTGATACATTGTCTCAAAAATGCGAGCATTCA-TTGCCTTGGCCTCGTCGGAAT 114257 || ||||| || || ||||||||||| | |||| || | |||||| || | Sbjct 324109 CGCAGCGTGGTAGATGGTCTCAAAAATCTGCTTGTTCAGCTGAC-GAGCCTCGGGAGACT 324167 Query 114258 CAAACGCGAGTCGGCACA-AAATAAATACATCCGCGAGACCTTGGACACCGAGGCCAATT 114316 |||| | | | ||| | | || |||| || ||||| |||||||||| ||||| Sbjct 324168 CAAAAG-GCATGCGCAGAGCCAGGAAGGCATCAGCCAGACCCTGGACACCGACACCAATC 324226 Query 114317 GGGCGATGTCTCATATTAGACTTTCGAGCGGTCTCC---ACGGGATAAAAATTCCTATCG 114373 ||||| || | ||| || || | | || |||| || || || ||| ||| Sbjct 324227 GGGCGGTGGCGCATGTT--GCTGTTG-TAGGCCTCCGTGACAGGGTAGTGGTTCACATCA 324283 Query 114374 ATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGCTTTTCGTAATCA 114433 || | | || || || | || |||| ||||| ||||||||||||| | | || Sbjct 324284 ATGATGCGGTTCAGGTTGCGGACAACGACCTGTGTGACTTCATGAAGCTTTCCAAAGTCG 324343 Query 114434 AAACTGCGAGTCTCTTCATTGACATACTTAGGAAGGGCGATTGACGCCAGATTACACACA 114493 | || | | | | ||| | || ||||| | || ||||| || |||||| Sbjct 324344 TACTCGCCCTTGTTGTAGTCAACAAATGAGGGCAGGGCAAGAGAGGCCAGGTTGCACACA 324403 Query 114494 GAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTACACAAATTTGAACTCTTAATG 114553 | |||||| || |||||| ||||| || || |||| || || || |||| Sbjct 324404 GCAACCTCATCGGGGGCACAGTACTCGATAATCTCAGTGCACAGGTTGGAGCTGCGAATG 324463 Query 114554 GTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAAAGCATGTATGGC 114613 || |||| |||||| || || ||| ||| || |||||||||||||| | || Sbjct 324464 GTACCCAGGTTCTTCTGGTTGCTCTTGCGGTTGCAGCTGTCCTTGTAAAGCATAAAGGGA 324523 Query 114614 GTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCAGA-CATCGGCGGCTGG--CACA 114670 | || ||||| || |||| || ||||| || | ||| | | || | | | | || Sbjct 324524 TTGCCAGTCTCGGTCTGGGCCTCCAGAATGGCGTACCACAGCTTCTGAGCTTTGATAACC 324583 Query 114671 GTGGCGTTGGCTCGCCCCTCCTCCTCGTACTTTGTGTAGAGGGCTTCAAACTCTTCACCC 114730 | ||| | | || || |||| ||||||||| ||| || ||||||||||| || || Sbjct 324584 AT-GCG--GCCACGGCCTTCCTTTTCGTACTTTTCGTACAGAGCTTCAAACTCATCGCCG 324640 Query 114731 ACGGCCTCTGAGAGCCCTGGTGCCTTATCTGGGCAGAAGAGAGACCATTGACCACCCTCC 114790 | || | || || || || | ||||| | |||| ||| | | || | Sbjct 324641 TAGCAGTCAGCCAGGCCGGGGCACTCGTTGGGGCACATCAGAGTCCAGTCCTCGTTCTTC 324700 Query 114791 TCAACACGCTTCATGAAGAGGTCTGGGATCCAGAGAGCTGAGAAGAGATCCCGACAGCGA 114850 ||||||||||||||||| ||||| |||||| ||||| ||| | || || ||| Sbjct 324701 TCAACACGCTTCATGAACAGGTCGCAGATCCACAGAGCCAGGAACAAGTCGCGGGCACGA 324760 Query 114851 GCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCAC 114910 | ||||| | || || || |||| || | || || | | || |||||||| Sbjct 324761 ACCTCTTCCTTTCCATGGTTCTTGCGCAGGTCAAGGAACTCAAACACGTCGGCGTGCCAG 324820 Query 114911 GGTTCCAGGTA 114921 ||||||||||| Sbjct 324821 GGTTCCAGGTA 324831 >seq4 Length=2525909 Score = 154 bits (170), Expect = 2e-32 Identities = 531/814 (65%), Gaps = 17/814 (2%) Strand=Plus/Minus Query 125758 GTAGTCCCCAACCCGCTTCTCGAAGAAGTTTGTCTTCCCGTCCAAGCT-GATATTCTCCA 125816 |||||| || || ||||||||||||||||| ||||| ||| || ||| ||| ||||||| Sbjct 2287327 GTAGTCGCCCACGCGCTTCTCGAAGAAGTTGGTCTTGCCG-CCGAGCGAGATGTTCTCCA 2287269 Query 125817 TAAAATCAAATGGGTTCTTTGAGTTCCAAAT-TGTTGGCACCCCAATCTGTTTGAGGAGA 125875 |||| ||||| ||||| | | | | | | || | || | | ||| || Sbjct 2287268 TAAAGTCAAAGGGGTTGGTGGCGCGGTAGACCTTTTCGTTTCCGAGGGCGAC-GAGCAGG 2287210 Query 125876 CGATCCGAGACGTACTCAATGTACTCAGACATCTTCTCAGAGTTCATACCGATGAGGTTA 125935 || || | |||| |||||||||||| ||| || | |||||| |||| |||| | Sbjct 2287209 CGGTCGGCGACGAACTCAATGTACTGCTTCATGAGGTCGGCGTTCATGCCGAGGAGGCCA 2287150 Query 125936 CATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATTTCCACGGCTTCCCGCACGATG-GC 125994 || || || || || | |||| |||||||||| | || || || | ||| || Sbjct 2287149 CAGGGCAGGGCCTCGGTCAGGAACTCCTTCTCAATGACGACAGCATCGGTGATGATCTGC 2287090 Query 125995 GTGAATGGTGTCCACCCCAGGTCTATTGCGCAAAGTCTTGAAGAGTTCCACGGCAAACTC 126054 || | | | | | || | ||| | | ||| || |||||| || Sbjct 2287089 TCGACTAGC-TGCTTGCTGGGGCGGTTGTTGAGGTGCGAGAACAGCAGACAGGCAAAGTC 2287031 Query 126055 TTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCCTGGCATGAG 126114 ||| || ||||||||||| ||||| || || || |||||| ||| || |||||||| Sbjct 2287030 GGTGTGCAGGCCCTCGTCACGCGAGATCAGCTCGTTGGAGAAGGTCAGGCCAGGCATGAG 2286971 Query 126115 ACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGATTCCCTCCAC 126174 || ||||| || |||||| || | || | |||||||||||||| ||||| || Sbjct 2286970 GCCGCGCTTGCGCAGCCAGAAGATGGAGGCGAAAGCGCCCGAGAAGAAGATGCCCTCGAC 2286911 Query 126175 ACACGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGCGACT--TTGT-GTCAAACCACTT 126231 || || || | || |||| ||||||| ||||| |||| | | |||||| Sbjct 2286910 GGCGGCAAAGGCGACCAGGCGCTGGGCAAAGG---TCGACTCCTTGTCGGTGATCCACTT 2286854 Query 126232 CATCGCCCACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGCTTCAAAGAGTTC 126291 | ||||| | ||||| ||| ||||||| ||| | ||| || | ||||| | Sbjct 2286853 GAGGGCCCAGTCGGCCTTGCGGCGGATGCACGGGATGGTATCGATGGCGTTGAAGAGGTA 2286794 Query 126292 CTTCTTTTCTGATGGATCTTTGATGTACTTATCTATGAGTTTTGAATATGTTTCGCCGTG 126351 | | || || || |||||||| | || || || || || || ||| ||| Sbjct 2286793 GGTGCGCTGCGAGGGCTCCTTGATGTAAGTGTCGATCAGCAGCGAGTACGTCTCGGAGTG 2286734 Query 126352 GACCAT-TTCATTATGGCACTGATACGCGTAGAAAGAGCGCGCTTCGCTTATCTGTACCT 126410 || | | ||| || | ||| | ||||||| |||| || ||| ||||| |||| Sbjct 2286733 GATGTTCTCCATCAT-GATCTGGAAGCCGTAGAAGCAGCGGGCCTCGGGGATCTGGACCT 2286675 Query 126411 CATCGGCAAAATTGTTATTGATATTCTCAAAAACAATTCCATCGGACCCAGCAAAAAACG 126470 | ||| ||| | || ||||| || || || ||||| | || || || | Sbjct 2286674 CGCCGGAGAAACGCTCGACGAGGTTCTCGTTGACGATGCCGTCGGATGCGGCGAAGAAGG 2286615 Query 126471 CCAGGATATACTTTATGAATTTCTGTTCATTCTCGTTCA---GGGTCTTCCAGTCGTCAA 126527 | ||||| | | ||||| | |||||||| || ||||| || | |||||||||| || Sbjct 2286614 CGAGGATGTGCGAGATGAAGTACTGTTCATCCTTGTTCAGGCGGTTGTTCCAGTCGTGAA 2286555 Query 126528 GATCCTTCGAGAGATCTACCTCCTCCGCAGTCCA 126561 | ||||| || || || | ||||| |||||||| Sbjct 2286554 GGTCCTTGGACAGGTCAATTTCCTCGGCAGTCCA 2286521 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597353510396960