Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chalaropsis_20thielavioides_20[genbank_20GCA_5F001599435.1_202016- 03-01] 12 sequences; 23,333,049 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq8 347 1e-90 >seq8 Length=1110981 Score = 347 bits (384), Expect = 1e-90 Identities = 1098/1671 (66%), Gaps = 38/1671 (2%) Strand=Plus/Minus Query 93715 AATTACGATTACTTTGCCTTCAAAACTCTGGAGAAGTCGTACCTCCTCAAGATGGATGGC 93774 || ||| | ||||||| |||||| || |||||| || ||||| || ||| | || ||| Sbjct 325305 AACTACCAGTACTTTGGCTTCAAGACCCTGGAGCGCTCCTACCTGCTTAAGCTCGACGGC 325246 Query 93775 AGGGTTTCCGAGCGACCGCACCAGCTGCTGATGCGCGTCGCCATCGGGATTCACGGCCAC 93834 | | || |||||| || || || || | ||||| || ||| |||| ||| || || Sbjct 325245 AAGATTGTCGAGCGTCCCCAGCACATGATTATGCGTGTTGCCGTCGGCATTTGGGGTGAC 325186 Query 93835 GACATGCCGAATGTTTTGCGGGCTTTCAGAGACATGCGGGACAAGAGGTATACCATGGCC 93894 | || | |||| | | ||| || |||| | |||| | |||| || Sbjct 325185 AATGTGGAGCGTGTTCTCGAGACTTACAACCTCATGTCGAGCAAGTTCTTTACCCATGCG 325126 Query 93895 ACCCCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTGAT- 93953 | || || || |||||||| || ||||| | | ||| ||||||| || || || | Sbjct 325125 TCTCCCACTCTCTTCAACGCCGGTACCCCTCAGGCCCAGCTGTCTTCATGCTTTCTAGTC 325066 Query 93954 GACGAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCAT 94013 ||| | |||| |||| ||| || |||| ||| | ||||||| ||||| | || Sbjct 325065 GAC-ATGAAGGACGACAGCATTGAGGGCATTTACGATACCCTCAAGACTTGTGCTATGAT 325007 Query 94014 CTCAAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCCTA 94073 ||| || || || || ||||| ||| |||||| | | ||||||| || ||||| Sbjct 325006 CTCCAAGATGGCTGGCGGCATCGGTCTCAACGTCCACCGCATTCGTGCCACTGGCTCCTA 324947 Query 94074 CATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACAA 94133 ||| ||| ||||| || ||||||||||| | || |||||| | || ||||||||||| Sbjct 324946 CATTGCCGGCACCAACGGTACCTCCAACGGTATTGTTCCTATGTTGCGTGTCTTCAACAA 324887 Query 94134 CGCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATCT 94193 | |||| ||||| || ||||||||||| | | || ||| | || || | || || Sbjct 324886 CACGGCCCGCTATGTTGACCAGGGTGGCAACAAGCGGCCCGGTGCCTTTGCTATATACCT 324827 Query 94194 CGAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAACGA 94253 || ||||||||||| |||||| | ||| | |||||||| |||||||| || || || Sbjct 324826 GGAACCCTGGCACGCCGACGTGTTTGAGTTCCTTGACCTGCGCAAGAACCATGGAAAGGA 324767 Query 94254 TCTGGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAACG 94313 || | ||| | ||| | ||| ||||| ||| | ||||| || ||||| || Sbjct 324766 AGAGGTTCGTGCCCGCGACTTGTTCCTGGCTCTGTGGATCTGCGACCTGTTCATGAAGCG 324707 Query 94314 CGTCGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACTGTCCGA 94373 || ||||| ||| | ||||| ||| | || ||||| || || ||||| ||| | || Sbjct 324706 TGTTGAGAAGAACGAGGACTGGACTCTGATGTGCCCCAACGAGTGCCCCGGCCTGGCTGA 324647 Query 94374 C--GTTTGTGGATCGCGTTTTGAAGACTTGTATGCTCGTTACGAATCGCAGGGCAAGGCC 94431 | | | ||| | | ||||||| |||| | |||||| | | ||| | | Sbjct 324646 CTGCTACGGCGAT-GAG-TTTGAAGCTCTGTACGAAAAGTACGAAAAGGAAGGCCGTGGC 324589 Query 94432 AGGAAGGTTATGGATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTACAGGTGGAGACG 94491 | | |||||| | ||| |||||||||| | || |||| | ||| ||||| Sbjct 324588 CGCATGGTTATCAAAGCTCAGAAGCTGTGGTACGCCATTCTGGAGGCCCAGACCGAGACT 324529 Query 94492 GGTACGCCCTACATCTTGTTCAAGGAC-TCTGTCAACGCCAAGTCCAACCAGCAGCACCT 94550 || | |||| || | | ||||||| ||| |||| |||| ||||||| || |||| Sbjct 324528 GGCAATCCCTTTATGCTTTACAAGGACAGCTG-CAACCGCAAGAGCAACCAGAAGAACCT 324470 Query 94551 CGGGGTGATCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTTCTCCGGACGA 94610 || || ||||| || |||||||| |||||| ||||||| | | || || || Sbjct 324469 GGGTACCATTCGCAGCTCCAACCTGTGCACTGAGATTATCGAGTACTGTGCCCCCGATGA 324410 Query 94611 GATTGCTGTGTGTAACCTGGGCTCCATCAACCTGTCCACTTTCGTGCGAGATGCCTACAC 94670 | |||||||||| ||||||| ||| | |||| || | || || || ||||| Sbjct 324409 GGTTGCTGTGTGCAACCTGGCCTCTCTTGCCCTGCCCTCATTTGT------TGACTACA- 324357 Query 94671 GTCTACTGCTTCGTTCGA-TCTGGAGGAGCTT-GTGAACT-TCGCGGGAAGGATGGTCTT 94727 | | || || ||| | |||| ||||| |||| | | | || | | ||| Sbjct 324356 -ACAAGGGC-GAGTACGACTTTGGA-AAGCTTCATGAAGTCACACAGGTCG--TTGTCCG 324302 Query 94728 GAACCTGAACAGGGTAATCGACAAGAACTTCTACCCCGTCCCGGAGGCGGAGAACTCAAA 94787 ||||||||| | | || || |||| |||||| ||| ||||||| | ||| || Sbjct 324301 CAACCTGAACCGCATCATTGATGTGAACCACTACCCTGTCACGGAGGCCTACAACAGCAA 324242 Query 94788 CCTGAAGCATCGGCCCATCGGCATCGGCGTCCAGGGTTTCGCGGACGCGCTGGTGATGAT 94847 | || || || || || || |||| ||||||||| | || || || | || | Sbjct 324241 CATGCGCCACCGCCCGATTGGTGTCGGTGTCCAGGGTCTGGCTGATGCCTTCCTGGCTCT 324182 Query 94848 GCGTCTGCCCTACGACTCTGTCGA--CGCGGCGGGTTTGAATTTGAACATATTCGAAAGC 94905 ||| |||| | || ||| ||| | || | | |||| | | || || || | | Sbjct 324181 GCGCATGCCTTTTGAGTCTCCCGAGGCTCGTCAG--CTGAACAAGCAGATTTTTGAGACC 324124 Query 94906 ATTTATTACGGGGCCATGAAACAATCCGTCCA-CTTGGCCAGATCGGACGGCGGGCCACA 94964 || || ||| || ||| || | | ||| ||||| | || ||| || | Sbjct 324123 ATCTACCACGCTGCGCTGACGGCCTCAATGGAGATTGCCCAGA-CTGAGGGC---ACATA 324068 Query 94965 CGAATCGTTCCGCGGATCGCCCTTGGAACAGGGCATTTTTCAGTTCGACCTCTGGGGTGT 95024 | | | || ||||| | |||||||| | || || ||| | |||| ||| Sbjct 324067 CTCTACTTATGAGGGCTCGCCGGTCTCGCAGGGCATCCTGCAATTTGACATGTGGGATGT 324008 Query 95025 GAAGCCCTCGGGTCTGTACGACTGGGAAGCTCTACGCGCTGATG-TTATCAAACACGGTG 95083 || |||| | ||| | |||||| | || | | || | ||| | ||||||| Sbjct 324007 GACGCCCAGCGATCTTTGGGACTGGACTTCCCT-CAAGGAGAAGATTAAGCAGCACGGTG 323949 Query 95084 TGAAAAACGCGCTGCTTGTGGCCCCCATGCCCACGGCCTCCACGGCGCAGATCCTTGGCA 95143 | ||| | || || || || ||||||||||| ||| ||| |||||||||| || | Sbjct 323948 TCCGCAACTCTCTCCTGGTTGCACCCATGCCCACTGCCAGTACGTCGCAGATCCTGGGTA 323889 Query 95144 ACAACGAGTCGTTCGAACCCTTCACCTCCAACGTGTACAACAGGCGGGTGCTCGCCGGGG 95203 ||||||||| || || |||| ||| |||||| | ||| | | || || || ||||| | Sbjct 323888 ACAACGAGTGCTTTGAGCCCTACACTTCCAACATTTACCAGCGCCGTGTTCTTGCCGGCG 323829 Query 95204 AATTCCCCGTCATCAACAAGCACCTCCTACGGGACC-TGACGTCTCTGGGTGTGTGGGGT 95262 | |||| || ||||| || || || |||| || || | || || ||||| | Sbjct 323828 AGTTCCAGGTTGTCAACCCTTGGCTGCTGCGCGACCTTGTCGAC-CTTGGCCTGTGGTCT 323770 Query 95263 GACAAGGTCAAGAACCAACTGCTACGCGCCAACGGCTCCGTCCAGAACATCCCGCA-AAT 95321 || || | ||||||| | | || |||||||||| |||| || || | ||| || Sbjct 323769 GATAACATGAAGAACCGGATCATTGCCGACAACGGCTCCATCCAAAATAT-CAGCAGCAT 323711 Query 95322 ACCGGAGGACATCAAGGCGCTCTACAAGACCGTGTGGGAGATCCCGCAGCG 95372 || ||| ||||||||||| |||||||| |||||||| || ||||||| Sbjct 323710 TCCCACGGATATCAAGGCGCTATACAAGACGGTGTGGGAAATTTCGCAGCG 323660 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494723125791520