Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chalaropsis_20thielavioides_20[genbank_20GCA_5F001599435.1_202016-
03-01] 12 sequences; 23,333,049 total letters
Query= NC_011183.1
Length=154641
Score E
Sequences producing significant alignments: (Bits) Value
seq8 347 1e-90
>seq8
Length=1110981
Score = 347 bits (384), Expect = 1e-90
Identities = 1098/1671 (66%), Gaps = 38/1671 (2%)
Strand=Plus/Minus
Query 93715 AATTACGATTACTTTGCCTTCAAAACTCTGGAGAAGTCGTACCTCCTCAAGATGGATGGC 93774
|| ||| | ||||||| |||||| || |||||| || ||||| || ||| | || |||
Sbjct 325305 AACTACCAGTACTTTGGCTTCAAGACCCTGGAGCGCTCCTACCTGCTTAAGCTCGACGGC 325246
Query 93775 AGGGTTTCCGAGCGACCGCACCAGCTGCTGATGCGCGTCGCCATCGGGATTCACGGCCAC 93834
| | || |||||| || || || || | ||||| || ||| |||| ||| || ||
Sbjct 325245 AAGATTGTCGAGCGTCCCCAGCACATGATTATGCGTGTTGCCGTCGGCATTTGGGGTGAC 325186
Query 93835 GACATGCCGAATGTTTTGCGGGCTTTCAGAGACATGCGGGACAAGAGGTATACCATGGCC 93894
| || | |||| | | ||| || |||| | |||| | |||| ||
Sbjct 325185 AATGTGGAGCGTGTTCTCGAGACTTACAACCTCATGTCGAGCAAGTTCTTTACCCATGCG 325126
Query 93895 ACCCCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTGAT- 93953
| || || || |||||||| || ||||| | | ||| ||||||| || || || |
Sbjct 325125 TCTCCCACTCTCTTCAACGCCGGTACCCCTCAGGCCCAGCTGTCTTCATGCTTTCTAGTC 325066
Query 93954 GACGAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCAT 94013
||| | |||| |||| ||| || |||| ||| | ||||||| ||||| | ||
Sbjct 325065 GAC-ATGAAGGACGACAGCATTGAGGGCATTTACGATACCCTCAAGACTTGTGCTATGAT 325007
Query 94014 CTCAAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCCTA 94073
||| || || || || ||||| ||| |||||| | | ||||||| || |||||
Sbjct 325006 CTCCAAGATGGCTGGCGGCATCGGTCTCAACGTCCACCGCATTCGTGCCACTGGCTCCTA 324947
Query 94074 CATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACAA 94133
||| ||| ||||| || ||||||||||| | || |||||| | || |||||||||||
Sbjct 324946 CATTGCCGGCACCAACGGTACCTCCAACGGTATTGTTCCTATGTTGCGTGTCTTCAACAA 324887
Query 94134 CGCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATCT 94193
| |||| ||||| || ||||||||||| | | || ||| | || || | || ||
Sbjct 324886 CACGGCCCGCTATGTTGACCAGGGTGGCAACAAGCGGCCCGGTGCCTTTGCTATATACCT 324827
Query 94194 CGAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAACGA 94253
|| ||||||||||| |||||| | ||| | |||||||| |||||||| || || ||
Sbjct 324826 GGAACCCTGGCACGCCGACGTGTTTGAGTTCCTTGACCTGCGCAAGAACCATGGAAAGGA 324767
Query 94254 TCTGGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAACG 94313
|| | ||| | ||| | ||| ||||| ||| | ||||| || ||||| ||
Sbjct 324766 AGAGGTTCGTGCCCGCGACTTGTTCCTGGCTCTGTGGATCTGCGACCTGTTCATGAAGCG 324707
Query 94314 CGTCGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACTGTCCGA 94373
|| ||||| ||| | ||||| ||| | || ||||| || || ||||| ||| | ||
Sbjct 324706 TGTTGAGAAGAACGAGGACTGGACTCTGATGTGCCCCAACGAGTGCCCCGGCCTGGCTGA 324647
Query 94374 C--GTTTGTGGATCGCGTTTTGAAGACTTGTATGCTCGTTACGAATCGCAGGGCAAGGCC 94431
| | | ||| | | ||||||| |||| | |||||| | | ||| | |
Sbjct 324646 CTGCTACGGCGAT-GAG-TTTGAAGCTCTGTACGAAAAGTACGAAAAGGAAGGCCGTGGC 324589
Query 94432 AGGAAGGTTATGGATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTACAGGTGGAGACG 94491
| | |||||| | ||| |||||||||| | || |||| | ||| |||||
Sbjct 324588 CGCATGGTTATCAAAGCTCAGAAGCTGTGGTACGCCATTCTGGAGGCCCAGACCGAGACT 324529
Query 94492 GGTACGCCCTACATCTTGTTCAAGGAC-TCTGTCAACGCCAAGTCCAACCAGCAGCACCT 94550
|| | |||| || | | ||||||| ||| |||| |||| ||||||| || ||||
Sbjct 324528 GGCAATCCCTTTATGCTTTACAAGGACAGCTG-CAACCGCAAGAGCAACCAGAAGAACCT 324470
Query 94551 CGGGGTGATCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTTCTCCGGACGA 94610
|| || ||||| || |||||||| |||||| ||||||| | | || || ||
Sbjct 324469 GGGTACCATTCGCAGCTCCAACCTGTGCACTGAGATTATCGAGTACTGTGCCCCCGATGA 324410
Query 94611 GATTGCTGTGTGTAACCTGGGCTCCATCAACCTGTCCACTTTCGTGCGAGATGCCTACAC 94670
| |||||||||| ||||||| ||| | |||| || | || || || |||||
Sbjct 324409 GGTTGCTGTGTGCAACCTGGCCTCTCTTGCCCTGCCCTCATTTGT------TGACTACA- 324357
Query 94671 GTCTACTGCTTCGTTCGA-TCTGGAGGAGCTT-GTGAACT-TCGCGGGAAGGATGGTCTT 94727
| | || || ||| | |||| ||||| |||| | | | || | | |||
Sbjct 324356 -ACAAGGGC-GAGTACGACTTTGGA-AAGCTTCATGAAGTCACACAGGTCG--TTGTCCG 324302
Query 94728 GAACCTGAACAGGGTAATCGACAAGAACTTCTACCCCGTCCCGGAGGCGGAGAACTCAAA 94787
||||||||| | | || || |||| |||||| ||| ||||||| | ||| ||
Sbjct 324301 CAACCTGAACCGCATCATTGATGTGAACCACTACCCTGTCACGGAGGCCTACAACAGCAA 324242
Query 94788 CCTGAAGCATCGGCCCATCGGCATCGGCGTCCAGGGTTTCGCGGACGCGCTGGTGATGAT 94847
| || || || || || || |||| ||||||||| | || || || | || |
Sbjct 324241 CATGCGCCACCGCCCGATTGGTGTCGGTGTCCAGGGTCTGGCTGATGCCTTCCTGGCTCT 324182
Query 94848 GCGTCTGCCCTACGACTCTGTCGA--CGCGGCGGGTTTGAATTTGAACATATTCGAAAGC 94905
||| |||| | || ||| ||| | || | | |||| | | || || || | |
Sbjct 324181 GCGCATGCCTTTTGAGTCTCCCGAGGCTCGTCAG--CTGAACAAGCAGATTTTTGAGACC 324124
Query 94906 ATTTATTACGGGGCCATGAAACAATCCGTCCA-CTTGGCCAGATCGGACGGCGGGCCACA 94964
|| || ||| || ||| || | | ||| ||||| | || ||| || |
Sbjct 324123 ATCTACCACGCTGCGCTGACGGCCTCAATGGAGATTGCCCAGA-CTGAGGGC---ACATA 324068
Query 94965 CGAATCGTTCCGCGGATCGCCCTTGGAACAGGGCATTTTTCAGTTCGACCTCTGGGGTGT 95024
| | | || ||||| | |||||||| | || || ||| | |||| |||
Sbjct 324067 CTCTACTTATGAGGGCTCGCCGGTCTCGCAGGGCATCCTGCAATTTGACATGTGGGATGT 324008
Query 95025 GAAGCCCTCGGGTCTGTACGACTGGGAAGCTCTACGCGCTGATG-TTATCAAACACGGTG 95083
|| |||| | ||| | |||||| | || | | || | ||| | |||||||
Sbjct 324007 GACGCCCAGCGATCTTTGGGACTGGACTTCCCT-CAAGGAGAAGATTAAGCAGCACGGTG 323949
Query 95084 TGAAAAACGCGCTGCTTGTGGCCCCCATGCCCACGGCCTCCACGGCGCAGATCCTTGGCA 95143
| ||| | || || || || ||||||||||| ||| ||| |||||||||| || |
Sbjct 323948 TCCGCAACTCTCTCCTGGTTGCACCCATGCCCACTGCCAGTACGTCGCAGATCCTGGGTA 323889
Query 95144 ACAACGAGTCGTTCGAACCCTTCACCTCCAACGTGTACAACAGGCGGGTGCTCGCCGGGG 95203
||||||||| || || |||| ||| |||||| | ||| | | || || || ||||| |
Sbjct 323888 ACAACGAGTGCTTTGAGCCCTACACTTCCAACATTTACCAGCGCCGTGTTCTTGCCGGCG 323829
Query 95204 AATTCCCCGTCATCAACAAGCACCTCCTACGGGACC-TGACGTCTCTGGGTGTGTGGGGT 95262
| |||| || ||||| || || || |||| || || | || || ||||| |
Sbjct 323828 AGTTCCAGGTTGTCAACCCTTGGCTGCTGCGCGACCTTGTCGAC-CTTGGCCTGTGGTCT 323770
Query 95263 GACAAGGTCAAGAACCAACTGCTACGCGCCAACGGCTCCGTCCAGAACATCCCGCA-AAT 95321
|| || | ||||||| | | || |||||||||| |||| || || | ||| ||
Sbjct 323769 GATAACATGAAGAACCGGATCATTGCCGACAACGGCTCCATCCAAAATAT-CAGCAGCAT 323711
Query 95322 ACCGGAGGACATCAAGGCGCTCTACAAGACCGTGTGGGAGATCCCGCAGCG 95372
|| ||| ||||||||||| |||||||| |||||||| || |||||||
Sbjct 323710 TCCCACGGATATCAAGGCGCTATACAAGACGGTGTGGGAAATTTCGCAGCG 323660
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 494723125791520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |