Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chalaropsis_20thielavioides_20[genbank_20GCA_5F001599435.1_202016-
03-01] 12 sequences; 23,333,049 total letters
Query= NC_011588.1
Length=127615
Score E
Sequences producing significant alignments: (Bits) Value
seq2 89.7 4e-13
>seq2
Length=3936381
Score = 89.7 bits (98), Expect = 4e-13
Identities = 136/190 (72%), Gaps = 4/190 (2%)
Strand=Plus/Plus
Query 7574 ATGTGACATGGAGGAAGAGCCATTTTGTCCAAGTCTACCGGATTCCACGCGCTCATTATA 7633
|| ||||| || || || ||||| || | | |||| | || ||||||||||||||||||
Sbjct 850136 ATATGACACGGCGGCAGGGCCATCTTCTTTAGGTCTGCGGGGTTCCACGCGCTCATTATA 850195
Query 7634 ATGCGACGACTTGTAGGG--TCCTCTTTGATGGTGCGAATCACTTGTTGCAATTGGTCGA 7691
||||| ||| | ||| || | || |||| || | || || | | |||||||
Sbjct 850196 ATGCGCCGA-TCGTACGGATTGGTC-TTGAGCTTGTGGATGACCTCGGCTAGCTGGTCGA 850253
Query 7692 CCCCTTTATTCGTATAGTCCGTGTTACAATCAACGTACGATGCGCCAAAATGCCTCCATT 7751
| ||||| ||| |||||||| || || |||||| ||||||||||| | |||||
Sbjct 850254 CACCTTTGCCCGTGTAGTCCGTTTTGGCGTCTACGTACTCGGCGCCAAAATGGCGCCATT 850313
Query 7752 GAAAACCGTA 7761
| || |||||
Sbjct 850314 GGAAGCCGTA 850323
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 408243140294432
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |