Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chalaropsis_20thielavioides_20[genbank_20GCA_5F001599435.1_202016- 03-01] 12 sequences; 23,333,049 total letters Query= NC_011588.1 Length=127615 Score E Sequences producing significant alignments: (Bits) Value seq2 89.7 4e-13 >seq2 Length=3936381 Score = 89.7 bits (98), Expect = 4e-13 Identities = 136/190 (72%), Gaps = 4/190 (2%) Strand=Plus/Plus Query 7574 ATGTGACATGGAGGAAGAGCCATTTTGTCCAAGTCTACCGGATTCCACGCGCTCATTATA 7633 || ||||| || || || ||||| || | | |||| | || |||||||||||||||||| Sbjct 850136 ATATGACACGGCGGCAGGGCCATCTTCTTTAGGTCTGCGGGGTTCCACGCGCTCATTATA 850195 Query 7634 ATGCGACGACTTGTAGGG--TCCTCTTTGATGGTGCGAATCACTTGTTGCAATTGGTCGA 7691 ||||| ||| | ||| || | || |||| || | || || | | ||||||| Sbjct 850196 ATGCGCCGA-TCGTACGGATTGGTC-TTGAGCTTGTGGATGACCTCGGCTAGCTGGTCGA 850253 Query 7692 CCCCTTTATTCGTATAGTCCGTGTTACAATCAACGTACGATGCGCCAAAATGCCTCCATT 7751 | ||||| ||| |||||||| || || |||||| ||||||||||| | ||||| Sbjct 850254 CACCTTTGCCCGTGTAGTCCGTTTTGGCGTCTACGTACTCGGCGCCAAAATGGCGCCATT 850313 Query 7752 GAAAACCGTA 7761 | || ||||| Sbjct 850314 GGAAGCCGTA 850323 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 408243140294432