Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chalaropsis_20thielavioides_20[genbank_20GCA_5F001599435.1_202016-
03-01] 12 sequences; 23,333,049 total letters
Query= NC_012639.1
Length=141291
Score E
Sequences producing significant alignments: (Bits) Value
seq3 104 2e-17
seq10 84.2 2e-11
>seq3
Length=3916844
Score = 104 bits (114), Expect = 2e-17
Identities = 163/231 (71%), Gaps = 2/231 (1%)
Strand=Plus/Plus
Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170
|| || ||||| || | | || |||||||| || || |||||||| || || || |||
Sbjct 1905206 ATACCACCGCGCAGACGGAGGACGAGATGCAGAGTGGACTCCTTTTGAATGTTGTAGTCG 1905265
Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230
| ||| ||| || | || ||||| || | |||| || |||||||||||
Sbjct 1905266 GAAAGGGTACGGCCATCCTCAAGCTGCTTTCCAGCAAAGATCAGGCGCTGCTGGTCCGGG 1905325
Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTC 45289
|| ||||| || || || || || || |||| || | || | ||||||||||||||
Sbjct 1905326 GGGATGCCCTCCTTGTCCTGGATCTTGGACTTGA-CGTTGTCGATCGTGTCGGAAGACTC 1905384
Query 45290 GACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
|||||||||||| | || || || || || || || || || ||||||||
Sbjct 1905385 GACTTCGAGAGTGATGGTCTTTCCAGTCAGGGTCTTGACGAAGATTTGCAT 1905435
Score = 89.7 bits (98), Expect = 5e-13
Identities = 151/216 (70%), Gaps = 2/216 (1%)
Strand=Plus/Plus
Query 45114 CCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTG 45173
||||| || || | || || |||||||| || |||||||| ||||| || || || |
Sbjct 1904924 CCTCCACGCAGACGCAGAACCAGATGCAGAGTAGATTCCTTCTGGATGTTGTAGTCTGAG 1904983
Query 45174 ACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGA 45233
| || | ||| || | || || || ||| | || | || ||||||||||| ||
Sbjct 1904984 AGAGTGCGACCATCCTCAAGCTGCTTGCCAGCGAAAATGAGACGCTGCTGGTCCGGGGGG 1905043
Query 45234 ATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGAC 45292
||||| || || ||||| || || |||| || | || | ||| || || ||||||||
Sbjct 1905044 ATGCCCTCCTTGTCTTGGATCTTGGACTTGA-CGTTGTCAATGGTATCAGAGGACTCGAC 1905102
Query 45293 TTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTAC 45328
||||||||| | || || || || || || || ||
Sbjct 1905103 TTCGAGAGTTATGGTCTTTCCAGTCAGGGTCTTGAC 1905138
>seq10
Length=988720
Score = 84.2 bits (92), Expect = 2e-11
Identities = 112/156 (72%), Gaps = 0/156 (0%)
Strand=Plus/Plus
Query 45186 TCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTA 45245
|| |||| || || || ||| | |||| || ||||||||||| |||||||| || ||
Sbjct 887182 TCCTCCAGCTGCTTACCAGCGAAGATCAGGCGCTGCTGGTCCGGGGGAATGCCCTCCTTG 887241
Query 45246 TCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACC 45305
|| ||||| || |||| || | ||||| || ||||| || ||||| |||| |
Sbjct 887242 TCCTGAATCTTGGACTTGACATTGTCGATAGTGTCCGAGGACTCAACCTCGAGGGTAATC 887301
Query 45306 GTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCATC 45341
|| || || || || || || || ||||| ||||||
Sbjct 887302 GTCTTACCCGTAAGGGTCTTGACGAAAATCTGCATC 887337
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 452003132199520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |