Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chalaropsis_20thielavioides_20[genbank_20GCA_5F001599435.1_202016-
03-01] 12 sequences; 23,333,049 total letters
Query= NC_014765.1
Length=198519
Score E
Sequences producing significant alignments: (Bits) Value
seq8 196 6e-45
seq3 183 4e-41
>seq8
Length=1110981
Score = 196 bits (216), Expect = 6e-45
Identities = 282/398 (71%), Gaps = 0/398 (0%)
Strand=Plus/Plus
Query 7463 TCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCCTTCA 7522
||||||||||||| ||| || || || ||||| | ||||| || |||||||| | ||
Sbjct 883840 TCTTCACCACCCAGGTGAGTGTCACCAGCGGTGGACTTGACCTCGAAGATACCATCCTCG 883899
Query 7523 ATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACGTTCGTA 7582
||| | | || ||| ||||| || |||||||||||||| || || || || |||||
Sbjct 883900 ATGGTCAGCAGCGAGACATCGAAAGTACCACCACCCAGATCGAAGATCAGGACGTTGCGC 883959
Query 7583 TCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATA 7642
|| | || ||||| || |||||||| || || || || || || || || || ||
Sbjct 883960 TCACCCTCGACCTTCTTGTCAAGACCGTAGGCAATGGCAGCAGCAGTGGGCTCGTTGATG 884019
Query 7643 ATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAA 7702
||||| ||| ||||||||||||||| | | || || || || || || || ||
Sbjct 884020 ATACGCAGAACGTTCAGGCCAGCAATGAGACCAGAGTCCTTGGTGGCCTGACGCTGAGAG 884079
Query 7703 TCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATACGAT 7762
||||| |||||||| ||||| || | ||| |||| |||| | | || || || ||
Sbjct 884080 TCGTTGAAGTAGGCAGGGACAGTGATGACAGCGTTGTTGACAGTGGTGCCCAGGTAGGAC 884139
Query 7763 TCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGCAAACTGT 7822
|| || | || ||| ||| | || ||||| || |||||||| |||| | |||||
Sbjct 884140 TCGGCAGTCTCACGCATCTTGATGAGGACCATGGAGGAAATCTCCTCAGGGGTGAACTGC 884199
Query 7823 TTCGTTTCACCGTTAAAATCAACTTCAATCATGGGTTT 7860
|| || ||||| || || || || || || ||||| ||
Sbjct 884200 TTGGTCTCACCCTTGAACTCGACCTCGATGATGGGCTT 884237
>seq3
Length=3916844
Score = 183 bits (202), Expect = 4e-41
Identities = 356/521 (68%), Gaps = 15/521 (3%)
Strand=Plus/Plus
Query 7243 CAGTTCCTCAAAACGTGCACGGGTAATGGATGTATAG--AAATCAACGCCGTCGTATAAC 7300
||| ||||| ||||| |||||||| || || | || || || | || ||| | |
Sbjct 2415315 CAGCTCCTCGAAACGAGCACGGGTGATC--TGGACAGTGAAGTCCTCACCATCGAACAGG 2415372
Query 7301 GAATCAATTTCAATGGTTGTTTGTGCCGTCGAAGATAACGTTCGCTTTGCGCGCTCACAC 7360
| || || |||||||| || || || ||||||| || ||||| || ||||| ||
Sbjct 2415373 GTGTCGATCTCAATGGTGGTCTGAGCACCGGAAGATAGGGTACGCTTGGCACGCTCGCAA 2415432
Query 7361 GCCGTTCGTAAACGACGAAGGGCACGCGGGTTACCGGAAATATCTTTCTTATGTTTACGT 7420
|| || || | |||||| |||||||| | | |||||||| ||| ||||| || ||
Sbjct 2415433 GCGGTACGGAGACGACGCAGGGCACGGGCATCACCGGAAAGATCCTTCTTGGTCTTGCGG 2415492
Query 7421 TTAAACTCTTCAGAGAAGT-GTCGAAGGAGTCTCGAATCGAAATCTTCACCACCCAAGTG 7479
| || || | | ||| ||| | | || | | ||||| || | |||||||| |||
Sbjct 2415493 GTGAAGTCCTTCTTGCAGTAGTCCA-GCAGGTTGGTGTCGAAGTCCTGACCACCCAGGTG 2415551
Query 7480 TGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCCTTCAATGTTTAACAACGAAAC 7539
||||| || || || || ||||| |||| ||| || | ||||| | || || ||
Sbjct 2415552 AGTATCACCAGCAGTGGCCTTGACGGTGAAGACACCACCCTGGATGTTCAGCAGGGAGAC 2415611
Query 7540 ATCAAACGTACCACCACCCAGGTCAAAAATGAGTACGTTCGTATCGTCGTCTTTGTTCTT 7599
||| || |||||||||||||| || | || || ||||| || | ||| |||
Sbjct 2415612 ATCGAAGGTACCACCACCCAGATCGTAGATCAGGACGTTGCGCTCCTTGTCAGA---CTT 2415668
Query 7600 ATCG------AGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAGACA 7653
| || |||||||| ||||| || || || || || || || || ||||| |||
Sbjct 2415669 ACCGGCACCCAGACCGTAAGCGATGGCAGCGGCGGTAGGCTCGTTGATGATACGCAGAAC 2415728
Query 7654 GTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTA 7713
||||||||||||||| | | || || || || || || || || ||||| |||||
Sbjct 2415729 GTTCAGGCCAGCAATGGCACCGGCGTCCTTGGTAGCCTGGCGCTGGTTGTCGTTGAAGTA 2415788
Query 7714 GGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGA 7754
||| ||||| || | ||| || | | ||| ||||| ||||
Sbjct 2415789 GGCAGGGACGGTGATGACAGCCTTCTCGACCTTCTTGCCGA 2415829
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 635132704730080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |