Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chalaropsis_20thielavioides_20[genbank_20GCA_5F001599435.1_202016- 03-01] 12 sequences; 23,333,049 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq8 129 7e-25 >seq8 Length=1110981 Score = 129 bits (142), Expect = 7e-25 Identities = 916/1461 (63%), Gaps = 35/1461 (2%) Strand=Plus/Plus Query 105935 TAGATGTTCGTCGTGTAGGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGAG 105994 || ||||| | |||||||| |||||||| || || ||||||| ||| || | || | Sbjct 323852 TAAATGTTGGAAGTGTAGGGCTCAAAGCACTCGTTGTTACCCAGGATCTGCGACGTACTG 323911 Query 105995 GCTGTTGGCATTGGTGCCATCAAAAGACTGTTACGAAGACCCTTTTCCTTGATGCGTTCC 106054 || || ||||| ||||| | || ||| ||| || | ||| | | ||| || ||| Sbjct 323912 GCAGTGGGCATGGGTGCAACCAGGAGAGAGTTGCGGACACCGTGCTGCTTAATCTTCTCC 323971 Query 106055 TTGAGAACATCCCAGTCGTAGTTGA--GCTTGGTTTCACCTTCCCACATATCAAATTGAA 106112 ||||| | |||||| | || ||| || |||| | ||||||| |||||||| | Sbjct 323972 TTGAGGGAAGTCCAGTCCCAAA-GATCGCTGGGCGTCACAT-CCCACATGTCAAATTGCA 324029 Query 106113 GCACCCCTTGGGACGTGGGAGAACCCTCAAATGTCTCATAGGAACCTTGGGCTTCAGCCA 106172 | | || || || || || |||||| | || || | || | | | || | Sbjct 324030 GGATGCCCTGCGAGACCGGCGAGCCCTCATAAGTAGAGTATGTGCCCTCAGTCTGGGCAA 324089 Query 106173 ATTCACAGCTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCATCT 106232 || ||| ||| | ||||| || ||||| ||||| || | |||| || Sbjct 324090 TCTCCATTGAGGCCGTCAGCGCAGCGTGGTAGATGGTCTCAAAAATCTGCTTGTTCAGCT 324149 Query 106233 CCTTGGCTTCATCTGAATCAAA-----TGCGTAGCGGCACAAAATAAATACATCCGCGAG 106287 || || || ||||| |||| || | || || |||| || || Sbjct 324150 GACGAGCCTCGGGAGACTCAAAAGGCATGCGCAGAGCCAGGAAGG-----CATCAGCCAG 324204 Query 106288 ACCTTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTCAAC 106347 ||| || ||||| | |||||| || | ||| ||||| || || || | || Sbjct 324205 ACCCTGGACACCGACACCAATCGGGCGGTGGCGCATGTTGCTGTTGTAGGCCTCCGTGAC 324264 Query 106348 GGGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTTC 106407 || || || ||||||| ||||| || || | ||| | || ||||| ||| Sbjct 324265 AGGGTAGTGGTTCACATCAATGATGCGGTTCAGGTTGCGGACAACGACCTGTGTGACTTC 324324 Query 106408 ATGAAGTTTTTCATAATCAAAAGTGCGAGTCTCTTCATTGACATACTTTGGAAGGGCGAT 106467 |||||| ||| || | || | || | | | | ||| | || ||||| | Sbjct 324325 ATGAAGCTTTCCAAAGTCGTACTCGCCCTTGTTGTAGTCAACAAATGAGGGCAGGGCAAG 324384 Query 106468 TGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACA 106527 || |||| ||||| ||||| |||||| | |||||| | ||| || || || Sbjct 324385 AGAGGCCAGGTTGCACACAGCAACCTCATCGGGGGCACAGTACTCGATAATCTCAGTGCA 324444 Query 106528 CAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTTTTGTTGCACGCATC 106587 || |||||| || ||| || |||| ||||| ||||| ||||| |||||| || Sbjct 324445 CAGGTTGGAGCTGCGAATGGTACCCAGGTTCTTCTGGTTGCTCTTGCGGTTGCAGCTGTC 324504 Query 106588 CTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGACTTGAGAATTGCCTTCCACA- 106646 |||||| ||||| |||| | || ||||| ||||| | || ||||| || | ||||| Sbjct 324505 CTTGTAAAGCATAAAGGGATTGCCAGTCTCGGTCTGGGCCTCCAGAATGGCGTACCACAG 324564 Query 106647 CATCGGCGGCTGGT--ACAATGGCGTTGGCCCGTCCCTCCGCCTCGTACTTTGTGTAGAG 106704 | || | | | | || ||| || | | || || ||| ||||||||| ||| || Sbjct 324565 CTTCTGAGCTTTGATAACCATG-CG--GCCACGGCCTTCCTTTTCGTACTTTTCGTACAG 324621 Query 106705 GGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCTGGACAGAAAAG 106764 ||||||||||| || || ||| | || || || || || || || | || Sbjct 324622 AGCTTCAAACTCATCGCCGTAGCAGTCAGCCAGGCCGGGGCACTCGTTGGGGCACATCAG 324681 Query 106765 AGACCATTGACCACCCTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGG--AT 106822 || ||| | | || |||||| ||||||||||| ||||| |||||||| | | Sbjct 324682 AGTCCAGTCCTCGTTCTTCTCAACACGCTTCATGAACAGGTCGCAGATCCACAGAGCCAG 324741 Query 106823 GAAAAGAGATCTCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGAAC 106882 ||| | || || | ||| ||||||| | || ||||| || | ||||||||| Sbjct 324742 GAACA-AG-TCGCGGGCACGAACCTCTTCCTTTCCATGGTTCTTGCGCAGGTCAAGGAAC 324799 Query 106883 TCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATC----CCTTTCGACG 106938 || | | || |||||||| || || || || | || | | | || | | | Sbjct 324800 TCAAACACGTCGGCGTGCCAGGGTTCCAGGTATATAGCAAAGGCACCGGGCCGCTTGTTG 324859 Query 106939 CCCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAATACC 106998 ||| | || | |||||||| || ||| ||| || || || | ||| |||| |||||| Sbjct 324860 -CCACCCTGGTCAACATAGCGGGCCGTGTTGTTGAAGACACGCAACATAGGAACAATACC 324918 Query 106999 ATCTGATTGACCATTTGTCCCCCGAATACGAGATTTATTGGCTCTCACATCATGGATGTG 107058 | || ||| || || || ||| || | |||| | | |||| || Sbjct 324919 GTTGGAGGTACCGTTGGTGCCGGCAATGTAGGAGCCAGTGGCACGAATGCGGTGGACGTT 324978 Query 107059 CATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCATAGAT 107118 | || || || |||||| ||| ||||| ||||| | | || || | || || Sbjct 324979 GAGACCGATGCCGCCAGCCATCTTGGAGATCATAGCACAAGTCTTGAGGGTATCGTAAAT 325038 Query 107119 ACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCT-TG 107177 || | || ||| ||||| || ||| || ||||| |||| ||| || || | Sbjct 325039 GCCCTCAATGCTGTCGTCCTTCATGTCGACTAGAAAGCATGAAGACAGCTG-GGCCTGAG 325097 Query 107178 GTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCTTG--GGACATCTT 107235 | ||||| || |||||||| || || | || || | | | | |||| ||||| Sbjct 325098 GGGTACCGGCGTTGAAGAGAGTGGGAGACGCATG--GGTAAAGAACTTGCTCGACATGAG 325155 Query 107236 GTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATGGCCACACGCAT 107295 || ||| ||||| | ||| || | | || || ||||||| ||| |||||||| Sbjct 325156 GTTGTAAGTCTCGAGAACACGCTCCACATTGTCACCCCAAATGCCGACGGCAACACGCAT 325215 Query 107296 AAACATGTATTGGGGTGTTTCCATGAGGATGCCATCGAGCCGTTGAAGATAGCTCTTCTC 107355 || ||||| ||||| || | | |||| |||||| | || ||| ||| Sbjct 325216 AATCATGTGCTGGGGACGCTCGACAATCTTGCCGTCGAGCTTAAGCAGGTAGGAGCGCTC 325275 Query 107356 AAGGGTTTTGAGACCAAAGTA 107376 ||||| |||| |||||||| Sbjct 325276 CAGGGTCTTGAAGCCAAAGTA 325296 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589980711502880