Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chalaropsis_20thielavioides_20[genbank_20GCA_5F001599435.1_202016- 03-01] 12 sequences; 23,333,049 total letters Query= NC_015280.1 Length=181044 Score E Sequences producing significant alignments: (Bits) Value seq2 82.4 9e-11 >seq2 Length=3936381 Score = 82.4 bits (90), Expect = 9e-11 Identities = 95/128 (74%), Gaps = 0/128 (0%) Strand=Plus/Minus Query 153900 AGATTAGCACTACAGACTAGAGAGCAGCATATCAGGAGAGACAAAGCAACCAGTAACATC 153959 ||| | || || ||||| ||||| |||||||| | | || || || |||||||| | Sbjct 1842746 AGACTCGCCCTGCAGACCAGAGAACAGCATATTCGCCGTGAAAAGGCGACCAGTAATGTG 1842687 Query 153960 TGCACAGCTCAGGCACTGCTGGCTAATATGTCTGGATTCTATGCAGCATATCATGGTGCA 154019 ||||| || ||||| |||||||||||||||||| || ||||| || || ||| | Sbjct 1842686 TGCACTGCCCAGGCTTTGCTGGCTAATATGTCTGCCTTTTATGCCATCTACCACGGTCCC 1842627 Query 154020 GATGGACT 154027 || ||||| Sbjct 1842626 GAGGGACT 1842619 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 579212713118080