Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chalaropsis_20thielavioides_20[genbank_20GCA_5F001599435.1_202016-
03-01] 12 sequences; 23,333,049 total letters
Query= NC_015326.1
Length=346754
Score E
Sequences producing significant alignments: (Bits) Value
seq3 147 5e-30
seq10 114 3e-20
>seq3
Length=3916844
Score = 147 bits (162), Expect = 5e-30
Identities = 158/209 (76%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991
|| || || ||||||||||| |||||||| ||||| |||| ||| || | ||||| ||
Sbjct 1905227 ACGAGATGCAGAGTGGACTCCTTTTGAATGTTGTAGTCGGAAAGGGTACGGCCATCCTCA 1905286
Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051
|||||||| || || ||||| || || || ||||| || || ||||| || ||||| ||
Sbjct 1905287 AGCTGCTTTCCAGCAAAGATCAGGCGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGG 1905346
Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111
|| || ||||||||| || || ||||| ||| || ||||| || || | ||||||
Sbjct 1905347 ATCTTGGACTTGACGTTGTCGATCGTGTCGGAAGACTCGACTTCGAGAGTGATGGTCTTT 1905406
Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCAT 195140
|| |||| || || ||||| | ||||||
Sbjct 1905407 CCAGTCAGGGTCTTGACGAAGATTTGCAT 1905435
Score = 143 bits (158), Expect = 6e-29
Identities = 144/187 (77%), Gaps = 0/187 (0%)
Strand=Plus/Plus
Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991
|| || || |||||||||||||| || || ||||| |||| ||| || | ||||| ||
Sbjct 1905455 ACGAGATGCAGAGTGGACTCTTTCTGGATGTTGTAGTCGGAAAGGGTACGGCCATCCTCA 1905514
Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051
|||||||| || || ||||| || || || ||||| ||||| ||||| || ||||| ||
Sbjct 1905515 AGCTGCTTTCCAGCAAAGATCAGGCGCTGCTGGTCCGGAGGGATGCCCTCCTTGTCCTGG 1905574
Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111
|| || |||||| || || || ||||| ||| ||||||| |||||||| | |||||
Sbjct 1905575 ATCTTGGACTTGACATTGTCGATCGTGTCGGAAGTTTCCACCTCAAGGGTGATGGTCTTG 1905634
Query 195112 CCTGTCA 195118
|| ||||
Sbjct 1905635 CCGGTCA 1905641
>seq10
Length=988720
Score = 114 bits (126), Expect = 3e-20
Identities = 138/188 (73%), Gaps = 0/188 (0%)
Strand=Plus/Plus
Query 194953 TTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGCTTACCTGCGAAGATA 195012
|| || || ||||| || | || || | || || || ||||||||||| ||||||||
Sbjct 887149 TTCTGGATGTTGTAGTCAGACAGGGTGCGGCCGTCCTCCAGCTGCTTACCAGCGAAGATC 887208
Query 195013 AGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCA 195072
|| || || ||||| || |||||||| || ||||| ||||| || |||||| || ||
Sbjct 887209 AGGCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGAATCTTGGACTTGACATTGTCG 887268
Query 195073 ATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCAAAGTTTTTACGAAC 195132
|| |||||||| || || || ||||||| |||||| || || | || || |||||
Sbjct 887269 ATAGTGTCCGAGGACTCAACCTCGAGGGTAATCGTCTTACCCGTAAGGGTCTTGACGAAA 887328
Query 195133 ACTTGCAT 195140
| |||||
Sbjct 887329 ATCTGCAT 887336
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1109481429417204
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |