Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chalaropsis_20thielavioides_20[genbank_20GCA_5F001599435.1_202016-
03-01] 12 sequences; 23,333,049 total letters
Query= NC_018875.1
Length=119082
Score E
Sequences producing significant alignments: (Bits) Value
seq10 113 3e-20
seq7 86.0 5e-12
>seq10
Length=988720
Score = 113 bits (124), Expect = 3e-20
Identities = 140/192 (73%), Gaps = 0/192 (0%)
Strand=Plus/Plus
Query 48579 TTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATC 48638
|| || || ||||| ||||| || | || |||| |||| ||||||||| || || |||
Sbjct 887149 TTCTGGATGTTGTAGTCAGACAGGGTGCGGCCGTCCTCCAGCTGCTTACCAGCGAAGATC 887208
Query 48639 AGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAACCC 48698
|| ||||| || |||| ||||| |||||||||||| |||||| || ||| |
Sbjct 887209 AGGCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGAATCTTGGACTTGACATTGTCG 887268
Query 48699 ACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAAAA 48758
| || || || | ||| ||||| | |||||||| || ||||| | || || || |||
Sbjct 887269 ATAGTGTCCGAGGACTCAACCTCGAGGGTAATCGTCTTACCCGTAAGGGTCTTGACGAAA 887328
Query 48759 ATCTGCATCGTG 48770
||||||||| ||
Sbjct 887329 ATCTGCATCTTG 887340
>seq7
Length=1169112
Score = 86.0 bits (94), Expect = 5e-12
Identities = 113/157 (72%), Gaps = 0/157 (0%)
Strand=Plus/Plus
Query 9094 TGAGCAATCCTGTCCCCCTTATTCACGACAAAGTCTGTGTCGGAATGATTGAACAGCACC 9153
|| ||||| | ||| |||| || || | ||||| | |||| || |||||||| | |
Sbjct 395805 TGGGCAATGCGGTCGCCCTCCTTGACCTCGAAGTCGGCGTCGTGGTGGTTGAACAGGAGC 395864
Query 9154 ACTCCCACGTTACCCCTGTAATCCTCATCGATCACACCAGCACCCACGTCGATGAAGTGC 9213
|| || | || | ||| || | ||||| |||||||| || |||||||||||||
Sbjct 395865 ACCTTGACTTCGCCGCGGTAGTCGGCGTCGATGACACCAGCGCCGGTGTCGATGAAGTGC 395924
Query 9214 TTGACCGCTAGTCCAGAGCGGGGCGCGATTCGACCGT 9250
||| | || || || |||||||| ||||| || ||||
Sbjct 395925 TTGGCGGCAAGGCCGGAGCGGGGAGCGATGCGGCCGT 395961
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 380937544287876
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |