Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chalaropsis_20thielavioides_20[genbank_20GCA_5F001599435.1_202016-
03-01] 12 sequences; 23,333,049 total letters
Query= NC_019491.1
Length=291144
Score E
Sequences producing significant alignments: (Bits) Value
seq8 322 9e-83
seq4 255 1e-62
>seq8
Length=1110981
Score = 322 bits (356), Expect = 9e-83
Identities = 998/1524 (65%), Gaps = 63/1524 (4%)
Strand=Plus/Plus
Query 212906 AGGGTTGACTATCTGGAAGTCACCTGAGAGCACCCTCCTCTGGTAAAAGTTTGAAGTGTA 212965
||||||||| | |||||| || || | || || | | |||||||| ||| ||||||||
Sbjct 323809 AGGGTTGACAACCTGGAACTCGCCGGCAAGAACACGGCGCTGGTAAATGTTGGAAGTGTA 323868
Query 212966 GGGCTCGATGCTCTCGTTGTTCCCCAGAATCTGTGCAGTGCTGGCTGTGGGCATGGGAGC 213025
|||||| | || ||||||||| ||||| ||||| | || ||||| ||||||||||| ||
Sbjct 323869 GGGCTCAAAGCACTCGTTGTTACCCAGGATCTGCGACGTACTGGCAGTGGGCATGGGTGC 323928
Query 213026 CACCAGGAGACTGTTCCTCACTCCGTGCTCGCCGATGAGGCGCCGA-AGCTCTGCCCAGT 213084
||||||||| ||| | || ||||||| || | | || || | |||||
Sbjct 323929 AACCAGGAGAGAGTTGCGGACACCGTGCT-GCTTAATCTTCTCCTTGAGGGAAGTCCAGT 323987
Query 213085 CCCATCTGCCAGACAGGTCCTCGTCCTTCACGTTCCACATGTCAAACTGCAAGATGCCTT 213144
|||| || || | | |||| | |||||||||||| |||| |||||| |
Sbjct 323988 CCCAA---------AGATCGCTGGGCGTCACATCCCACATGTCAAATTGCAGGATGCCCT 324038
Query 213145 TGCTCACGGGGCTGCCCTGGTAAGAGGAGTAGGGGCCATGCTCCTTGGCCAGCTCGCAGG 213204
|| || ||||| |||| ||||| | ||| | || ||| | ||| |
Sbjct 324039 GCGAGACCGGCGAGCCCTCATAAGTAGAGTATGTGCCCTCAGTCTGGGCAATCTCCATTG 324098
Query 213205 ACGCCTGCAGGGCAGCGTAGTAGATGGTTTCAAATATCTCCCTGTTGAGCTTCTTGGCCT 213264
| ||| ||| ||||||| ||||||||| ||||| |||| | |||| |||| ||||
Sbjct 324099 AGGCCGTCAGCGCAGCGTGGTAGATGGTCTCAAAAATCTGCTTGTTCAGCTGACGAGCCT 324158
Query 213265 CTGGGGACGTGAAGGGCATCATCATGCGTTGGAACACATCAGCCAGCCCCTGGACCCCGA 213324
| || ||| || ||||| || |||| |||||||||| |||||||| ||||
Sbjct 324159 CGGGAGACTCAAAAGGCATGCGCAGAGCCAGGAAGGCATCAGCCAGACCCTGGACACCGA 324218
Query 213325 TGCCGATGGGTCTGTGTCTCAGGTTAGACTTGGAGCACTCCTCCAAGGGGTAAAAGTTGC 213384
|| || || | ||| | || ||| ||| || |||| | ||||| |||
Sbjct 324219 CACCAATCGGGCGGTGGCGCATGTTGCTGTTGTAGGCCTCCGTGACAGGGTAGTGGTTCA 324278
Query 213385 AGTCGATGATCTTGTTGAGGTTGCGGGTGGCCACTTTGGTGACATGGGCCAGGTA-CTCG 213443
|| ||||| ||| ||||||||| | || | ||||| | || | | ||
Sbjct 324279 CATCAATGATGCGGTTCAGGTTGCGGACAACGACCTGTGTGACTT----CATGAAGCTTT 324334
Query 213444 TGATTGAACACGTAGCCCCC------GTCCTGCACAAACTCAGGCAGGGCGATGCTGGCC 213497
| || |||| | || || | ||||| |||||||| | ||||
Sbjct 324335 CCA---AAGTCGTACTCGCCCTTGTTGTAGTCAACAAATGAGGGCAGGGCAAGAGAGGCC 324391
Query 213498 AGGTTGCAAACGGCCACCTCCTGAGAGTCTGTGTACTCCATGATCTCGGTGCACAGGTTG 213557
|||||||| || || ||||| | | | | |||||| || ||||| ||||||||||||
Sbjct 324392 AGGTTGCACACAGCAACCTCATCGGGGGCACAGTACTCGATAATCTCAGTGCACAGGTTG 324451
Query 213558 CTGCATCGGATGGTGCCCAGGTTCTGGTGGTTTGACTTTGCGTTGGCAGAA-TCCTTGTA 213616
|| || ||||| |||||||||| ||||| ||| ||| | |||| ||||||||
Sbjct 324452 GAGCTGCGAATGGTACCCAGGTTCTTCTGGTTGCTCTT-GCGGTTGCAGCTGTCCTTGTA 324510
Query 213617 GAGCATGTAGGGGGACCCGGTCTCTAGCTGGGACACCAGTATCTGGCTCCAGAGGTACCT 213676
||||| |||| || ||||| ||||| | |||| || | ||| || | |
Sbjct 324511 AAGCATAAAGGGATTGCCAGTCTCGGTCTGGGCCTCCAGAATGGCGTACCACAGCTTCTG 324570
Query 213677 GGCCTTGACCACCCGCCTGACAGCTCCGGGCGTAGCCT---CGTACTGTTCGTAGAGCTC 213733
|| |||| ||| | | || ||| | | ||| |||||| |||||| || |
Sbjct 324571 AGCTTTGATAACCATGCGGCCA----CGGCCTT--CCTTTTCGTACTTTTCGTACAGAGC 324624
Query 213734 GTTGAATTCGTGGCCCCAG-ACCCTGTCCAGTCCCGGACAGGATGCGGGACACATGAGGC 213792
| || || | ||| || | | | |||| || || || ||| ||||| ||
Sbjct 324625 TTCAAACTCATCGCCGTAGCAGTCAG-CCAGGCCGGGGCACTCGTTGGGGCACATCAGAG 324683
Query 213793 TCCAGTCCCCGT-CATCTCTGACTCTCTGCATGAACAGGTCCGGGACCCACAGCGCGGTG 213851
|||||||| ||| | |||| || | || |||||||||||| || |||||| || |
Sbjct 324684 TCCAGTCCTCGTTCTTCTCA-ACACGCTTCATGAACAGGTCGCAGATCCACAGAGCCAGG 324742
Query 213852 AACAGGTCCCTGGTCCTCCTCTCGTCCACTCCAGAGTTTTTGCGCAGATCTAGAAAGTCA 213911
|||| ||| | || | ||| ||| |||| ||| |||||||| || || || |||
Sbjct 324743 AACAAGTCGCGGGCACGAACCTCTTCCTTTCCATGGTTCTTGCGCAGGTCAAGGAACTCA 324802
Query 213912 AAGATGTCCGCGTGCCACGGCTCCATGTAGATGGCAAAGGCGCCCGGCC---TCTTGCCG 213968
|| | ||| |||||||| || |||| ||| || |||||||| || |||| | |||||
Sbjct 324803 AACACGTCGGCGTGCCAGGGTTCCAGGTATATAGCAAAGGCACCGGGCCGCTTGTTGCCA 324862
Query 213969 CCCTGGTCCACCAGCCTGGCCACCATGTTGAAGATGCGCAGGACGGGTACCAGCCCGTTG 214028
|||||||| || | |||| ||||||||| |||| | || || | ||||||
Sbjct 324863 CCCTGGTCAACATAGCGGGCCGTGTTGTTGAAGACACGCAACATAGGAACAATACCGTTG 324922
Query 214029 GACTGTCCGTTGGTTCCCGCTATATACGAGCCGGAGGCCCTCAGGTTGCTCATGGAGAGC 214088
|| |||||||| || || || || ||||| | ||| | | | | | | |||
Sbjct 324923 GAGGTACCGTTGGTGCCGGCAATGTAGGAGCCAGTGGCACGAATGCGGTGGACGTTGAGA 324982
Query 214089 CCTATGCCACCGGCGTACTTGGAGATCATGGCGCAGCGCCTCACAGTCTCCATGATGCCG 214148
|| ||||| || || |||||||||||| || || | | | || || |||||
Sbjct 324983 CCGATGCCGCCAGCCATCTTGGAGATCATAGCACAAGTCTTGAGGGTATCGTAAATGCCC 325042
Query 214149 GCCATGCTGTCATCTGTGAGGTTCAGCAAGAAGCAGCTCGAGAGCTGGGGCCTG-GACGA 214207
| |||||||| || | | || | | ||||| || |||| ||||||| | |
Sbjct 325043 TCAATGCTGTCGTCCTTCATGTCGACTAGAAAGCATGAAGACAGCT-GGGCCTGAGGGGT 325101
Query 214208 GCCAGAGTTGAAAAGCGTGGGGCTGGCATGGATCATAAACTTGTTAGAGAGGAGCCTGTA 214267
|| | |||||| || ||||| |||||| | | |||||| | || | ||| ||||
Sbjct 325102 ACCGGCGTTGAAGAGAGTGGGAGACGCATGGGTAAAGAACTTGCTCGACATGAGGTTGTA 325161
Query 214268 GGTCTCCAGGACTGAGGGGATGTCGTGCTTGT----GGATCTGTAGAGCGCA--CCTCAT 214321
||||| || || | | || |||| | || || ||| | |||
Sbjct 325162 AGTCTCGAGAAC--ACG----CTCCACATTGTCACCCCAAATGCCGACGGCAACACGCAT 325215
Query 214322 CAGCATGTGCTGGGGCCTCT---CTATGGGTCCTTTGGGGCCCTTGAGCAGGTAGGAGCG 214378
| |||||||||||| | || | || || | | | ||| ||||||||||||||
Sbjct 325216 AATCATGTGCTGGGGACGCTCGACAATCTTGCCGTCGAG---CTTAAGCAGGTAGGAGCG 325272
Query 214379 CTCCAGAGTCTTGAACCCAAAGTA 214402
|||||| |||||||| ||||||||
Sbjct 325273 CTCCAGGGTCTTGAAGCCAAAGTA 325296
>seq4
Length=2525909
Score = 255 bits (282), Expect = 1e-62
Identities = 572/850 (67%), Gaps = 28/850 (3%)
Strand=Plus/Minus
Query 47840 TGGTAGTCCCCCACTCTATTCTCAAAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTCC 47899
|||||||| ||||| | ||||| |||||||| ||||| || | | |||||||||||||
Sbjct 2287329 TGGTAGTCGCCCACGCGCTTCTCGAAGAAGTTGGTCTTGCCGCCGAGCGAGATGTTCTCC 2287270
Query 47900 ATGAAGAGGAAGGGGTTGGGTGTGTTATACACC----CGTGTC--AGGCCCATCTGTTCC 47953
|| ||| |||||||||| | | || ||| ||| || ||| | | |
Sbjct 2287269 ATAAAGTCAAAGGGGTTGGTGGCGCGGTAGACCTTTTCGTTTCCGAGGGCGA------CG 2287216
Query 47954 AGCAGGTGATCCGCGACGTACTCGATGTATTTTGACATGAGGGTGATGTTCATGCCTATG 48013
|||||| | || |||||| |||| ||||| | ||||||| | ||||||||| | |
Sbjct 2287215 AGCAGGCGGTCGGCGACGAACTCAATGTACTGCTTCATGAGGTCGGCGTTCATGCCGAGG 2287156
Query 48014 AGGGACAC-GGGCAAAGCCTTTGTGAGAAACTCCTTCTCTATCTGCACGGCTTCCCCCAC 48072
||| ||| ||||| |||| || || ||||||||||| || || || || |
Sbjct 2287155 AGGC-CACAGGGCAGGGCCTCGGTCAGGAACTCCTTCTCAATGACGACAGCATCGGTGAT 2287097
Query 48073 AATCTGCTTAACGCGGGACT--CTGAGG-GTTTGTTGCGCAGGTGCTTGGCATAGAGCAT 48129
||||||| || | || ||| || | |||||| |||||| | | ||||
Sbjct 2287096 GATCTGCTCGACTAGCTGCTTGCTGGGGCGGTTGTTG---AGGTGCGAGA---ACAGCAG 2287043
Query 48130 GCAGGCAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAG 48189
||||||||||| |||||| ||| ||||| || ||| ||| ||||||||||| ||
Sbjct 2287042 ACAGGCAAAGTCGGTGTGCAGGCCCTCGTCACGCGAGATCAGCTCGTTGGAGAAGGTCAG 2286983
Query 48190 ACCAGGCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAA 48249
|||||||||| || | || |||||||| || | ||||||| ||| ||||||||
Sbjct 2286982 GCCAGGCATGAGGCCGCGCTTGCGCAGCCAGAAGATGGAGGCGAAAGCGCCCGAGAAGAA 2286923
Query 48250 GATGCCCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCTGA 48309
||||||||| || || || || ||| || | || | || | | | |||||| |
Sbjct 2286922 GATGCCCTCGACGGCGGCAAAGGCGACCAGGCGCTGGGCAAAGGTCGACTCCTTGTCGGT 2286863
Query 48310 GATCCAGGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGGCATCGTCTCTATGGCCCG 48369
|||||| || |||||||| ||||| |||||| || || || || |||||
Sbjct 2286862 GATCCACTTGAGGGCCCAGTCGGCCTTGCGGCGGATGCACGGGATGGTATCGATGGCGTT 2286803
Query 48370 GAAGAGCTTCTTGCACTCACCTGCGTCCGCAACATAGGTAGTGAGCAGCTTTGCGTACAT 48429
|||||| | ||| || | ||| | || || || |||| | |||| |
Sbjct 2286802 GAAGAGGTAGGTGCGCTGCGAGGGCTCCTTGATGTAAGTGTCGATCAGCAGCGAGTACGT 2286743
Query 48430 CTCAGAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTCAAACAC 48489
||| ||||| | ||||| || ||||||||| ||||||||| | |||||| |
Sbjct 2286742 CTCGGAGTGGATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCAGCGGGCCTCGGGGAT 2286683
Query 48490 CTGCACTTCTGTGGAGAATCTCTCCAGCAGATTCTCATTGACTATCCCATCTGAAGCAGC 48549
||| || || |||||| | ||| | || ||||| ||||| || || || || || ||
Sbjct 2286682 CTGGACCTCGCCGGAGAAACGCTCGACGAGGTTCTCGTTGACGATGCCGTCGGATGCGGC 2286623
Query 48550 AAAGAAGGCAAGGACATGTTTAAGGAAATGGCGCTCGTTGTGGGTGAGAGC----ATTCC 48605
|||||||| |||| || | ||| | | || | | | | || || ||||
Sbjct 2286622 GAAGAAGGCGAGGATGTGCGAGATGAAGTACTGTTCATCCTTGTTCAG-GCGGTTGTTCC 2286564
Query 48606 AGCCCTGTACGTCTTTGCCCAGGTCCACTTCTTCCACAGTCCAGAAGGACGCGAGTGCTT 48665
|| | || | ||| ||| |||||| | ||| || |||||||||||||||| || |
Sbjct 2286563 AGTCGTGAAGGTCCTTGGACAGGTCAATTTCCTCGGCAGTCCAGAAGGACGCCTCGGCCT 2286504
Query 48666 TTTTGTACAT 48675
| ||||||||
Sbjct 2286503 TCTTGTACAT 2286494
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 931532660270080
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