Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chalaropsis_20thielavioides_20[genbank_20GCA_5F001599435.1_202016- 03-01] 12 sequences; 23,333,049 total letters Query= NC_020864.1 Length=205622 Score E Sequences producing significant alignments: (Bits) Value seq8 331 1e-85 seq3 212 8e-50 seq10 158 2e-33 seq9 84.2 3e-11 >seq8 Length=1110981 Score = 331 bits (366), Expect = 1e-85 Identities = 568/822 (69%), Gaps = 7/822 (1%) Strand=Plus/Minus Query 196061 GCTCTTCGTCGGCTTAGGACTGCATGTGAACGTGCCAAACGAACTCTCTCTTCTACGGCT 196120 ||||| ||||| ||| | ||||| || || |||||||| || || || |||||| | || Sbjct 883592 GCTCTGCGTCGTCTTCGCACTGCTTGCGAGCGTGCCAAGCGCACCCTGTCTTCTTCTGCC 883533 Query 196121 CAAACAATGGTTGAGATTGATTCGTTGTTTGACGGAATTGACTTCTATACAACTATTACC 196180 || || | |||||||||| || ||| || || | |||||||| || | || || Sbjct 883532 CAGACCTCGATTGAGATTGACTCTCTGTACGAGGGTGTCGACTTCTACACCTCCATCACT 883473 Query 196181 CGTGCACGTTTTGAAGAGTTAAACTCTGATTTGTTTAGGAAGTGTATGGAACCTGTTGAA 196240 ||||| ||||| || ||| | | ||| | || | || | || ||||| Sbjct 883472 CGTGCCCGTTTCGAGGAGCTGTGCCAGGATCTCTTCCGCTCCACCCTGCAGCCCGTTGAC 883413 Query 196241 CAAGTACTTCGTGACGCAAAGATGGATAAGTCTAAGGTTGATGAAATTGTCCTTGTGGGA 196300 | || || ||| || ||||| || |||||| |||| | || |||||||| || || Sbjct 883412 CGTGTTCTGACTGATGCCAAGATTGACAAGTCTCTGGTTCACGAGATTGTCCTGGTCGGT 883353 Query 196301 GGATCAACCCGTATTCCGAAGATTCAACAGATGCTTTCTAGCTTCTTCAATAATAAAGAT 196360 || || ||||||||||| || || || | | || || |||||| || || Sbjct 883352 GGTTCCACCCGTATTCCCCGCATCCAGAAGCTCATCTCGGACTACTTCAACGGCAAGGAG 883293 Query 196361 TTAAACAAAACGATCAACCCGGATGAAGCAGTTGCTTATGGTGCGGCCGTTCAGGCTGCT 196420 ||||| | |||||||| |||||||| ||||| || ||||| ||||| ||||||||| Sbjct 883292 CCTAACAAGAGCATCAACCCCGATGAAGCCGTTGCCTACGGTGCCGCCGTCCAGGCTGCT 883233 Query 196421 ATTCTCTCAGGTGT---TGACAATAATA--ACGTCCAAGATCTTCTGCTACTTGATGTTG 196475 || || || |||| | ||| || | || | |||| |||||| || ||||| | Sbjct 883232 ATCCTTTCTGGTGACACTTCCAACAAGACCACTAGCGAGAT--TCTGCTGCTGGATGTCG 883175 Query 196476 CACCCGTATCCCTGGGTCTTGAAACAGCGGGTGGTGTTATGACTAAAATTATTGATAGGA 196535 | || | ||||||||| |||| || || ||||| | ||||| || | ||| | | Sbjct 883174 CCCCTCTGTCCCTGGGTATTGAGACTGCCGGTGGCATGATGACCAAGCTGATTCCCCGTA 883115 Query 196536 ACACAACTATTCCGACTAAGAAGGAACAAGTCTTTTCAACGTATTCCGATAATCAACCAG 196595 |||| || || || || |||||| | ||||| || || | || || || || || | Sbjct 883114 ACACCACCATCCCCACCAAGAAGTCGGAGGTCTTCTCTACCTTCTCTGACAACCAGCCCG 883055 Query 196596 GTGTTCATATTCAAGTATATGAAGGAGAACGCTCCCGTGCAAAGGATAACCATCTACTTG 196655 |||| | ||||| || || || || |||||| || | ||||| ||| | || || | Sbjct 883054 GTGTCCTGATTCAGGTTTACGAGGGTGAACGCCAGCGCACCAAGGACAACAACCTGCTGG 882995 Query 196656 GAACTTTCGATTTGACGGGGATTCCAGCTGCACCCAGAGGTGTTCCACAGATTAATGTTT 196715 | | ||||| | || || ||||| | || ||| | |||||||| |||||| | ||| Sbjct 882994 GCAAGTTCGAGCTTACCGGTATTCCCCCCGCTCCCCGCGGTGTTCCCCAGATTGAGGTTA 882935 Query 196716 GCTTCGATATAGACGCAAATGGAATTCTAAACGTCACAGCTGAGGACAAGGCTTCTGGCA 196775 |||||| | || || ||||| || | |||||| | ||| ||| |||| | | |||| Sbjct 882934 CCTTCGACCTGGATGCCAATGGTATCATGAACGTCTCCGCTCTGGAGAAGGGTACCGGCA 882875 Query 196776 AATCTGAAAAGATTGTGATTACCAATGACAAGGGGCGGCTTTCTAAGGAGGAAATTGAAC 196835 | || | |||||||| || ||||| |||||||| || || ||||||||||| ||||| | Sbjct 882874 AGTCCAACAAGATTGTCATCACCAACGACAAGGGCCGCCTGTCTAAGGAGGAGATTGAGC 882815 Query 196836 GTATGGTTCAAGATGCGGAAAAGTACAGGGAAGAAGACGAGG 196877 | ||| || || || || ||||||| ||| || || |||| Sbjct 882814 GCATGCTTTCCGAGGCCGAGAAGTACAAGGACGAGGATGAGG 882773 Score = 210 bits (232), Expect = 3e-49 Identities = 288/401 (72%), Gaps = 6/401 (1%) Strand=Plus/Minus Query 195584 AAGCCTATGATTAATGTTGAATTTCACGGTGAGAAGAAACAATTTGCTCCCGAAGAAATT 195643 ||||| || || | || || || | ||||||| || || || | || || || ||| Sbjct 884237 AAGCCCATCATCGAGGTCGAGTTCAAGGGTGAGACCAAGCAGTTCACCCCTGAGGAGATT 884178 Query 195644 TCGTCTATGGTGTTGATTAAGATGAAGGAGACTGCGGAATCTTTCATGGGTAAAACTGTG 195703 || || ||||| | || |||||| |||||||| || || | | |||| | ||||| Sbjct 884177 TCCTCCATGGTCCTCATCAAGATGCGTGAGACTGCCGAGTCCTACCTGGGCACCACTGTC 884118 Query 195704 AAAGATGCAGTTGTGACTGTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAG 195763 || | || || | ||||| ||||| ||||||| || || || || ||||| || ||| Sbjct 884117 AACAACGCTGTCATCACTGTCCCTGCCTACTTCAACGACTCTCAGCGTCAGGCCACCAAG 884058 Query 195764 GACGCTGCTGCTATTGCGGGTCTAAACTGTCTTAGAATTATCAATGAACCAACAGCGGCT 195823 ||| ||| | ||||| || || ||| ||| | || ||||| || || || || ||| Sbjct 884057 GACTCTGGTCTCATTGCTGGCCTGAACGTTCTGCGTATCATCAACGAGCCCACTGCTGCT 883998 Query 195824 GCAATTGCTTATGGTCTGGACAAGAACAAGGACGAAGATAAA---AATGTATTGATCTTT 195880 || ||||| || ||||| |||||||| || ||| | | | || || ||||||| Sbjct 883997 GCCATTGCCTACGGTCTTGACAAGAA---GGTCGAGGGTGAGCGCAACGTCCTGATCTTC 883941 Query 195881 GATCTCGGTGGTGGTACGTTTGATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAA 195940 ||||| ||||||||||| || |||||||| || || | || || | |||||| ||||| Sbjct 883940 GATCTGGGTGGTGGTACTTTCGATGTCTCGCTGCTGACCATCGAGGATGGTATCTTCGAG 883881 Query 195941 GTAAAGGCTACTGCTGGTGATACTCATCTAGGTGGTGAAGA 195981 || ||| | || |||||||| ||||| || ||||||||||| Sbjct 883880 GTCAAGTCCACCGCTGGTGACACTCACCTGGGTGGTGAAGA 883840 >seq3 Length=3916844 Score = 212 bits (234), Expect = 8e-50 Identities = 522/783 (67%), Gaps = 23/783 (3%) Strand=Plus/Minus Query 195663 AGATGAAGGAGACTGCGGAATCTTTCATGGGTAAAACTGTGAAAGATGCAGTTGTGACTG 195722 |||||||||||| ||| || || || || || | || | | || || | || | Sbjct 2415856 AGATGAAGGAGATTGCCGAGGCTAAGATCGGCAAGAAGGTCGAGAAGGCTGTCATCACCG 2415797 Query 195723 TACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCTGCTATTGCGG 195782 | ||||| ||||||| || || || ||||| || |||||||| | ||| ||||| | Sbjct 2415796 TCCCTGCCTACTTCAACGACAACCAGCGCCAGGCTACCAAGGACGCCGGTGCCATTGCTG 2415737 Query 195783 GTCTAAACTGTCTTAGAATTATCAATGAACCAACAGCGGCTGCAATTGCTTATGGTCTGG 195842 | || ||| ||| | || ||||| || || || || ||||| || ||||| ||||||| Sbjct 2415736 GCCTGAACGTTCTGCGTATCATCAACGAGCCTACCGCCGCTGCCATCGCTTACGGTCTGG 2415677 Query 195843 ACAAGAACAAG---GACGAAGATAAAAATGTATTGATCTTTGATCTCGGTGGTGGTACGT 195899 ||| ||| | || || || |||||| ||||| ||||||||||| | Sbjct 2415676 GTGCCGGTAAGTCTGACAAGGAGCGCAACGTCCTGATCTACGATCTGGGTGGTGGTACCT 2415617 Query 195900 TTGATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCTACTGCTGGTG 195959 | |||||||| || || || || | |||||| | ||| || ||||| |||||||||| Sbjct 2415616 TCGATGTCTCCCTGCTGAACATCCAGGGTGGTGTCTTCACCGTCAAGGCCACTGCTGGTG 2415557 Query 195960 ATACTCATCTAGGTGGTGAAGATTTCGATGCACGTCTTCTCCGTCATTTGTCTG-ATGAG 196018 ||||||| || |||||| | || ||||| | || || | | || | | || Sbjct 2415556 ATACTCACCTGGGTGGTCAGGACTTCGACACCAACCTGCT-GGACTACTGCAAGAAGGAC 2415498 Query 196019 TTCCGTCGAAAGAATAAGAAAGATATTTCTGGAAATCCTAGGGCTCTTCGTCGGCTTAGG 196078 ||| || |||| ||||| ||| |||| || || | | || || ||||| || | Sbjct 2415497 TTCACCCGCAAGACCAAGAAGGATCTTTCCGGTGATGCCCGTGCCCTGCGTCGTCTCCGT 2415438 Query 196079 ACTGCATGTGAACGTGCCAAACGAACTCTCTCTTCTACGGCTCAAACAATGGTTGAGATT 196138 || || || || |||||||| || || || ||||| ||||| || | ||||||| Sbjct 2415437 ACCGCTTGCGAGCGTGCCAAGCGTACCCTATCTTCCGGTGCTCAGACCACCATTGAGATC 2415378 Query 196139 GATTCGTTGTTTGACGGAATTGACTT--CTATACAACTATTACCCGTGCACGTTTTGAAG 196196 || | |||| || || ||||| || | || || |||||||| ||||| || | Sbjct 2415377 GACACCCTGTTCGATGGTGAGGACTTCACTGTCCA--GATCACCCGTGCTCGTTTCGAGG 2415320 Query 196197 AGTTAAACTCTGA----TTTGTTTAGGAAGTGTATGGAACCTGTTGAACAAGTACTTCGT 196252 || | ||||| | |||| | || | | ||||||| |||| || || Sbjct 2415319 AGCTGAACTCCAAGGCCTTTGCT--GGCA--CTCTGGAACCCGTTGCCTCCGTCCTCAAG 2415264 Query 196253 GACGCAAAGATGGATAAGTCTAAG---GTTGATGAAATTGTCCTTGTGGGAGGATCAACC 196309 || || ||||| ||| ||| || || || || ||||| || || || || ||| Sbjct 2415263 GATGCTGGTATGGACAAG---AAGGGCGTCGACGAGATCGTCCTGGTTGGTGGTTCTACC 2415207 Query 196310 CGTATTCCGAAGATTCAACAGATGCTTTCTAGCTTCTTCAATAATAAAGATTTAAACAAA 196369 ||||| || ||||| || || |||| ||| |||||||| || | | | || Sbjct 2415206 CGTATCCCCAAGATCCAGAAGCTGCTGTCTGAGTTCTTCAACGGCAAGAAGCTGGAGAAG 2415147 Query 196370 ACGATCAACCCGGATGAAGCAGTTGCTTATGGTGCGGCCGTTCAGGCTGCTATTCTCTCA 196429 | |||||||| ||||| || ||||| || ||||| ||||| ||||| | ||| || || Sbjct 2415146 TCCATCAACCCCGATGAGGCCGTTGCCTACGGTGCCGCCGTCCAGGCCGGTATCCTGTCT 2415087 Query 196430 GGT 196432 ||| Sbjct 2415086 GGT 2415084 Score = 205 bits (226), Expect = 1e-47 Identities = 185/233 (79%), Gaps = 0/233 (0%) Strand=Plus/Minus Query 171857 GTAGTATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGT 171916 || ||||||||||||| || || ||||| |||||||| || ||||| ||||| || |||| Sbjct 1905440 GTGGTATGCAAATCTTCGTCAAGACCCTGACTGGAAAGACCATCACTCTCGAAGTCGAGT 1905381 Query 171917 CGTCAGACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCG 171976 | || ||||| ||||| ||| |||| ||||||| || || ||||| ||||| || || | Sbjct 1905380 CTTCCGACACGATCGACAACGTCAAGTCCAAGATCCAGGACAAGGAGGGCATCCCCCCGG 1905321 Query 171977 ATCAGCAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATT 172036 | ||||| || || || |||||||| || |||||||| ||||| |||||||| | || | Sbjct 1905320 ACCAGCAGCGCCTGATCTTTGCTGGAAAGCAGCTTGAGGATGGCCGTACCCTTTCCGACT 1905261 Query 172037 ACAACGTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGGT 172089 ||||| ||||||||||||| ||||| || || || || | || || |||||| Sbjct 1905260 ACAACATTCAAAAGGAGTCCACTCTGCATCTCGTCCTCCGTCTGCGCGGTGGT 1905208 Score = 174 bits (192), Expect = 2e-38 Identities = 405/604 (67%), Gaps = 9/604 (1%) Strand=Plus/Minus Query 195387 ACCGTACAACTCCATCGTACGTTGCCTTTACAGATAATGAACGTCTCGTTGGAGATGCCG 195446 |||||| ||||| || ||||| || || | ||| | || ||||||||||| || |||| Sbjct 837596 ACCGTATTACTCCTTCCTACGTCGCTTTCAACGATGAGGAGCGTCTCGTTGGTGACGCCG 837537 Query 195447 CAAAAAATCAGACAGCTATGAACCCTATCAATACTGTCTTTGACGCGAAGCGTCTTATTG 195506 | || || || | || ||||| |||| || |||||||| |||||||| || | Sbjct 837536 CCAAGAACCAAGCCGCCGCCAACCCCCTCAACACCATCTTTGACATCAAGCGTCTAATCG 837477 Query 195507 GTCGCAAGTTTTCGGATAAGAAAGTCCAAGACGATATAAAGGACTGGTCTTATGAAGTTG 195566 | |||||||| || ||| | | || || || ||| ||| | | | || | Sbjct 837476 GCCGCAAGTTCAACGACAAGGACCTTCAGTTTGACATGAAGCACTTCCCCTTCAAGGTCG 837417 Query 195567 TTCCCGGTGTGGCTGATAAGCC-TATGATTAATGTTGAATTTCACGGTGAGAAGAAACAA 195625 | | || | | ||||| |||| | | ||||| | | || | || Sbjct 837416 TCAACAA---GGATAACAAGCCGTATG-TCGAGGTTGAGTACAAGGGCTCTACCAAGACC 837361 Query 195626 TTTGCTCCCGAAGAAATTTCGTCTATGGTGTTGATTAAGATGAAGGAGACTGCGGAATCT 195685 || |||||||||| | || | ||| | || |||||||||||| || || ||| Sbjct 837360 TTCTCTCCCGAAGAGGTCTCTGCCATGATTCTGGGCAAGATGAAGGAGGTCGCTGAGTCT 837301 Query 195686 TTCATGGGTAAAACTGTGAAAGATGCAGTTGTGACTGTACCTGCTTACTTCAGTGATTCA 195745 | | | ||| | ||||| | | || || || ||||| ||||| ||||||| ||| | Sbjct 837300 TACCTCGGTGAGACTGTTACCCACGCCGTCGTCACTGTCCCTGCCTACTTCAACGATGCT 837241 Query 195746 CAACGACAGGCGACAAAGGACGCTGCTGCTATTGCGGGTCTAAACTGTCTTAGAATTATC 195805 || || ||||| || ||||| || | | | ||||| || || ||| || | || || Sbjct 837240 CAGCGTCAGGCTACCAAGGATGCCGGTACCATTGCCGGCCTCAACATCCTCCGTGTTGTC 837181 Query 195806 AATGAACCAACAGCGGCTGCAATTGCTTATGGTCTGGACAAGAACAAGG--ACGAAGATA 195863 || || || || || ||||| |||||||| || |||||||||| | | || || Sbjct 837180 AACGAGCCCACCGCCGCTGCCATTGCTTACGGCCTGGACAAGACTGACGCCACTGAGCGC 837121 Query 195864 AAAATGTATTGATCTTTGATCTCGGTGGTGGTACGTTTGATGTCTCACTTCTCAATATTG 195923 | || || | | | || || ||||||||||| |||||||| || ||||| ||||| Sbjct 837120 CAGAT-CATCG-TGTACGACCTGGGTGGTGGTACCTTTGATGTTTCTCTTCTGTCTATTG 837063 Query 195924 AAGGTGGTATATTCGAAGTAAAGGCTACTGCTGGTGATACTCATCTAGGTGGTGAAGATT 195983 | | ||| | || || || |||||||||||||| |||||||| |||||||| |||| Sbjct 837062 AGAGCGGTGTGTTTGAGGTTCGTGCTACTGCTGGTGACACTCATCTGGGTGGTGAGGATT 837003 Query 195984 TCGA 195987 |||| Sbjct 837002 TCGA 836999 >seq10 Length=988720 Score = 158 bits (174), Expect = 2e-33 Identities = 149/190 (78%), Gaps = 0/190 (0%) Strand=Plus/Minus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 ||||| || || || || |||||||| || || || || ||||||||||||||||| || Sbjct 887336 ATGCAGATTTTCGTCAAGACCCTTACGGGTAAGACGATTACCCTCGAGGTTGAGTCCTCG 887277 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 ||||| ||||| || |||| |||||||||| || ||||| |||||||| || || ||| Sbjct 887276 GACACTATCGACAATGTCAAGTCCAAGATTCAGGACAAGGAGGGCATTCCCCCGGACCAG 887217 Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041 || || || || || |||||||| ||||| || || || || ||||| |||| |||||| Sbjct 887216 CAGCGCCTGATCTTCGCTGGTAAGCAGCTGGAGGACGGCCGCACCCTGTCTGACTACAAC 887157 Query 172042 GTTCAAAAGG 172051 | || |||| Sbjct 887156 ATCCAGAAGG 887147 >seq9 Length=1092945 Score = 84.2 bits (92), Expect = 3e-11 Identities = 214/326 (66%), Gaps = 6/326 (2%) Strand=Plus/Plus Query 195662 AAGATGAAGGAGACTGCGGAATCTTTCATGGGTAAAACTGTGAAAGATGCAGTTGTGACT 195721 ||||||||||||||||| || | | | || || | | || | || || || || Sbjct 933989 AAGATGAAGGAGACTGCCGAGGCCTACCTGTCCAAGCCCATCAAGAACGCCGTCGTCACC 934048 Query 195722 GTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCTGCTATTGCG 195781 || || || ||||||| || || || || ||||| || ||||| |||| ||||| Sbjct 934049 GTTCCGGCCTACTTCAACGACTCCCAGCGCCAGGCAACCAAGGATGCTGGCCAGATTGCC 934108 Query 195782 GGTCTAAACTGTCTTAGAATTATCAATGAACCAACAGCGGCTGCAATTGCTTATGGTCTG 195841 || || ||| || | | |||| || || || || ||||| | || || || ||| Sbjct 934109 GGCCTGAACGTCCTGCGTGTCGTCAACGAGCCCACTGCCGCTGCCCTGGCCTACGGCCTG 934168 Query 195842 GACAAGAACAAGGACGAAGATAAAAATGTATTGATCTTTGATCTCGGTGGTGGTACGTTT 195901 |||||| | ||| | | || ||| ||||| ||||||||||| ||| Sbjct 934169 GACAAGGAGGCCGACCGCGTT------GTCGCCGTCTACGATCTGGGTGGTGGTACCTTT 934222 Query 195902 GATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCTACTGCTGGTGAT 195961 ||| |||| | ||| | || | | || | ||||| || ||| | || ||||| Sbjct 934223 GATATCTCCGTCCTCGAGATCCAGAGCGGCGTCTTCGAGGTCAAGTCCACCAACGGTGAC 934282 Query 195962 ACTCATCTAGGTGGTGAAGATTTCGA 195987 || || || |||||||| |||||||| Sbjct 934283 ACCCACCTGGGTGGTGAGGATTTCGA 934308 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 657862301320640