Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chalaropsis_20thielavioides_20[genbank_20GCA_5F001599435.1_202016-
03-01] 12 sequences; 23,333,049 total letters
Query= NC_020864.1
Length=205622
Score E
Sequences producing significant alignments: (Bits) Value
seq8 331 1e-85
seq3 212 8e-50
seq10 158 2e-33
seq9 84.2 3e-11
>seq8
Length=1110981
Score = 331 bits (366), Expect = 1e-85
Identities = 568/822 (69%), Gaps = 7/822 (1%)
Strand=Plus/Minus
Query 196061 GCTCTTCGTCGGCTTAGGACTGCATGTGAACGTGCCAAACGAACTCTCTCTTCTACGGCT 196120
||||| ||||| ||| | ||||| || || |||||||| || || || |||||| | ||
Sbjct 883592 GCTCTGCGTCGTCTTCGCACTGCTTGCGAGCGTGCCAAGCGCACCCTGTCTTCTTCTGCC 883533
Query 196121 CAAACAATGGTTGAGATTGATTCGTTGTTTGACGGAATTGACTTCTATACAACTATTACC 196180
|| || | |||||||||| || ||| || || | |||||||| || | || ||
Sbjct 883532 CAGACCTCGATTGAGATTGACTCTCTGTACGAGGGTGTCGACTTCTACACCTCCATCACT 883473
Query 196181 CGTGCACGTTTTGAAGAGTTAAACTCTGATTTGTTTAGGAAGTGTATGGAACCTGTTGAA 196240
||||| ||||| || ||| | | ||| | || | || | || |||||
Sbjct 883472 CGTGCCCGTTTCGAGGAGCTGTGCCAGGATCTCTTCCGCTCCACCCTGCAGCCCGTTGAC 883413
Query 196241 CAAGTACTTCGTGACGCAAAGATGGATAAGTCTAAGGTTGATGAAATTGTCCTTGTGGGA 196300
| || || ||| || ||||| || |||||| |||| | || |||||||| || ||
Sbjct 883412 CGTGTTCTGACTGATGCCAAGATTGACAAGTCTCTGGTTCACGAGATTGTCCTGGTCGGT 883353
Query 196301 GGATCAACCCGTATTCCGAAGATTCAACAGATGCTTTCTAGCTTCTTCAATAATAAAGAT 196360
|| || ||||||||||| || || || | | || || |||||| || ||
Sbjct 883352 GGTTCCACCCGTATTCCCCGCATCCAGAAGCTCATCTCGGACTACTTCAACGGCAAGGAG 883293
Query 196361 TTAAACAAAACGATCAACCCGGATGAAGCAGTTGCTTATGGTGCGGCCGTTCAGGCTGCT 196420
||||| | |||||||| |||||||| ||||| || ||||| ||||| |||||||||
Sbjct 883292 CCTAACAAGAGCATCAACCCCGATGAAGCCGTTGCCTACGGTGCCGCCGTCCAGGCTGCT 883233
Query 196421 ATTCTCTCAGGTGT---TGACAATAATA--ACGTCCAAGATCTTCTGCTACTTGATGTTG 196475
|| || || |||| | ||| || | || | |||| |||||| || ||||| |
Sbjct 883232 ATCCTTTCTGGTGACACTTCCAACAAGACCACTAGCGAGAT--TCTGCTGCTGGATGTCG 883175
Query 196476 CACCCGTATCCCTGGGTCTTGAAACAGCGGGTGGTGTTATGACTAAAATTATTGATAGGA 196535
| || | ||||||||| |||| || || ||||| | ||||| || | ||| | |
Sbjct 883174 CCCCTCTGTCCCTGGGTATTGAGACTGCCGGTGGCATGATGACCAAGCTGATTCCCCGTA 883115
Query 196536 ACACAACTATTCCGACTAAGAAGGAACAAGTCTTTTCAACGTATTCCGATAATCAACCAG 196595
|||| || || || || |||||| | ||||| || || | || || || || || |
Sbjct 883114 ACACCACCATCCCCACCAAGAAGTCGGAGGTCTTCTCTACCTTCTCTGACAACCAGCCCG 883055
Query 196596 GTGTTCATATTCAAGTATATGAAGGAGAACGCTCCCGTGCAAAGGATAACCATCTACTTG 196655
|||| | ||||| || || || || |||||| || | ||||| ||| | || || |
Sbjct 883054 GTGTCCTGATTCAGGTTTACGAGGGTGAACGCCAGCGCACCAAGGACAACAACCTGCTGG 882995
Query 196656 GAACTTTCGATTTGACGGGGATTCCAGCTGCACCCAGAGGTGTTCCACAGATTAATGTTT 196715
| | ||||| | || || ||||| | || ||| | |||||||| |||||| | |||
Sbjct 882994 GCAAGTTCGAGCTTACCGGTATTCCCCCCGCTCCCCGCGGTGTTCCCCAGATTGAGGTTA 882935
Query 196716 GCTTCGATATAGACGCAAATGGAATTCTAAACGTCACAGCTGAGGACAAGGCTTCTGGCA 196775
|||||| | || || ||||| || | |||||| | ||| ||| |||| | | ||||
Sbjct 882934 CCTTCGACCTGGATGCCAATGGTATCATGAACGTCTCCGCTCTGGAGAAGGGTACCGGCA 882875
Query 196776 AATCTGAAAAGATTGTGATTACCAATGACAAGGGGCGGCTTTCTAAGGAGGAAATTGAAC 196835
| || | |||||||| || ||||| |||||||| || || ||||||||||| ||||| |
Sbjct 882874 AGTCCAACAAGATTGTCATCACCAACGACAAGGGCCGCCTGTCTAAGGAGGAGATTGAGC 882815
Query 196836 GTATGGTTCAAGATGCGGAAAAGTACAGGGAAGAAGACGAGG 196877
| ||| || || || || ||||||| ||| || || ||||
Sbjct 882814 GCATGCTTTCCGAGGCCGAGAAGTACAAGGACGAGGATGAGG 882773
Score = 210 bits (232), Expect = 3e-49
Identities = 288/401 (72%), Gaps = 6/401 (1%)
Strand=Plus/Minus
Query 195584 AAGCCTATGATTAATGTTGAATTTCACGGTGAGAAGAAACAATTTGCTCCCGAAGAAATT 195643
||||| || || | || || || | ||||||| || || || | || || || |||
Sbjct 884237 AAGCCCATCATCGAGGTCGAGTTCAAGGGTGAGACCAAGCAGTTCACCCCTGAGGAGATT 884178
Query 195644 TCGTCTATGGTGTTGATTAAGATGAAGGAGACTGCGGAATCTTTCATGGGTAAAACTGTG 195703
|| || ||||| | || |||||| |||||||| || || | | |||| | |||||
Sbjct 884177 TCCTCCATGGTCCTCATCAAGATGCGTGAGACTGCCGAGTCCTACCTGGGCACCACTGTC 884118
Query 195704 AAAGATGCAGTTGTGACTGTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAG 195763
|| | || || | ||||| ||||| ||||||| || || || || ||||| || |||
Sbjct 884117 AACAACGCTGTCATCACTGTCCCTGCCTACTTCAACGACTCTCAGCGTCAGGCCACCAAG 884058
Query 195764 GACGCTGCTGCTATTGCGGGTCTAAACTGTCTTAGAATTATCAATGAACCAACAGCGGCT 195823
||| ||| | ||||| || || ||| ||| | || ||||| || || || || |||
Sbjct 884057 GACTCTGGTCTCATTGCTGGCCTGAACGTTCTGCGTATCATCAACGAGCCCACTGCTGCT 883998
Query 195824 GCAATTGCTTATGGTCTGGACAAGAACAAGGACGAAGATAAA---AATGTATTGATCTTT 195880
|| ||||| || ||||| |||||||| || ||| | | | || || |||||||
Sbjct 883997 GCCATTGCCTACGGTCTTGACAAGAA---GGTCGAGGGTGAGCGCAACGTCCTGATCTTC 883941
Query 195881 GATCTCGGTGGTGGTACGTTTGATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAA 195940
||||| ||||||||||| || |||||||| || || | || || | |||||| |||||
Sbjct 883940 GATCTGGGTGGTGGTACTTTCGATGTCTCGCTGCTGACCATCGAGGATGGTATCTTCGAG 883881
Query 195941 GTAAAGGCTACTGCTGGTGATACTCATCTAGGTGGTGAAGA 195981
|| ||| | || |||||||| ||||| || |||||||||||
Sbjct 883880 GTCAAGTCCACCGCTGGTGACACTCACCTGGGTGGTGAAGA 883840
>seq3
Length=3916844
Score = 212 bits (234), Expect = 8e-50
Identities = 522/783 (67%), Gaps = 23/783 (3%)
Strand=Plus/Minus
Query 195663 AGATGAAGGAGACTGCGGAATCTTTCATGGGTAAAACTGTGAAAGATGCAGTTGTGACTG 195722
|||||||||||| ||| || || || || || | || | | || || | || |
Sbjct 2415856 AGATGAAGGAGATTGCCGAGGCTAAGATCGGCAAGAAGGTCGAGAAGGCTGTCATCACCG 2415797
Query 195723 TACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCTGCTATTGCGG 195782
| ||||| ||||||| || || || ||||| || |||||||| | ||| ||||| |
Sbjct 2415796 TCCCTGCCTACTTCAACGACAACCAGCGCCAGGCTACCAAGGACGCCGGTGCCATTGCTG 2415737
Query 195783 GTCTAAACTGTCTTAGAATTATCAATGAACCAACAGCGGCTGCAATTGCTTATGGTCTGG 195842
| || ||| ||| | || ||||| || || || || ||||| || ||||| |||||||
Sbjct 2415736 GCCTGAACGTTCTGCGTATCATCAACGAGCCTACCGCCGCTGCCATCGCTTACGGTCTGG 2415677
Query 195843 ACAAGAACAAG---GACGAAGATAAAAATGTATTGATCTTTGATCTCGGTGGTGGTACGT 195899
||| ||| | || || || |||||| ||||| ||||||||||| |
Sbjct 2415676 GTGCCGGTAAGTCTGACAAGGAGCGCAACGTCCTGATCTACGATCTGGGTGGTGGTACCT 2415617
Query 195900 TTGATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCTACTGCTGGTG 195959
| |||||||| || || || || | |||||| | ||| || ||||| ||||||||||
Sbjct 2415616 TCGATGTCTCCCTGCTGAACATCCAGGGTGGTGTCTTCACCGTCAAGGCCACTGCTGGTG 2415557
Query 195960 ATACTCATCTAGGTGGTGAAGATTTCGATGCACGTCTTCTCCGTCATTTGTCTG-ATGAG 196018
||||||| || |||||| | || ||||| | || || | | || | | ||
Sbjct 2415556 ATACTCACCTGGGTGGTCAGGACTTCGACACCAACCTGCT-GGACTACTGCAAGAAGGAC 2415498
Query 196019 TTCCGTCGAAAGAATAAGAAAGATATTTCTGGAAATCCTAGGGCTCTTCGTCGGCTTAGG 196078
||| || |||| ||||| ||| |||| || || | | || || ||||| || |
Sbjct 2415497 TTCACCCGCAAGACCAAGAAGGATCTTTCCGGTGATGCCCGTGCCCTGCGTCGTCTCCGT 2415438
Query 196079 ACTGCATGTGAACGTGCCAAACGAACTCTCTCTTCTACGGCTCAAACAATGGTTGAGATT 196138
|| || || || |||||||| || || || ||||| ||||| || | |||||||
Sbjct 2415437 ACCGCTTGCGAGCGTGCCAAGCGTACCCTATCTTCCGGTGCTCAGACCACCATTGAGATC 2415378
Query 196139 GATTCGTTGTTTGACGGAATTGACTT--CTATACAACTATTACCCGTGCACGTTTTGAAG 196196
|| | |||| || || ||||| || | || || |||||||| ||||| || |
Sbjct 2415377 GACACCCTGTTCGATGGTGAGGACTTCACTGTCCA--GATCACCCGTGCTCGTTTCGAGG 2415320
Query 196197 AGTTAAACTCTGA----TTTGTTTAGGAAGTGTATGGAACCTGTTGAACAAGTACTTCGT 196252
|| | ||||| | |||| | || | | ||||||| |||| || ||
Sbjct 2415319 AGCTGAACTCCAAGGCCTTTGCT--GGCA--CTCTGGAACCCGTTGCCTCCGTCCTCAAG 2415264
Query 196253 GACGCAAAGATGGATAAGTCTAAG---GTTGATGAAATTGTCCTTGTGGGAGGATCAACC 196309
|| || ||||| ||| ||| || || || || ||||| || || || || |||
Sbjct 2415263 GATGCTGGTATGGACAAG---AAGGGCGTCGACGAGATCGTCCTGGTTGGTGGTTCTACC 2415207
Query 196310 CGTATTCCGAAGATTCAACAGATGCTTTCTAGCTTCTTCAATAATAAAGATTTAAACAAA 196369
||||| || ||||| || || |||| ||| |||||||| || | | | ||
Sbjct 2415206 CGTATCCCCAAGATCCAGAAGCTGCTGTCTGAGTTCTTCAACGGCAAGAAGCTGGAGAAG 2415147
Query 196370 ACGATCAACCCGGATGAAGCAGTTGCTTATGGTGCGGCCGTTCAGGCTGCTATTCTCTCA 196429
| |||||||| ||||| || ||||| || ||||| ||||| ||||| | ||| || ||
Sbjct 2415146 TCCATCAACCCCGATGAGGCCGTTGCCTACGGTGCCGCCGTCCAGGCCGGTATCCTGTCT 2415087
Query 196430 GGT 196432
|||
Sbjct 2415086 GGT 2415084
Score = 205 bits (226), Expect = 1e-47
Identities = 185/233 (79%), Gaps = 0/233 (0%)
Strand=Plus/Minus
Query 171857 GTAGTATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGT 171916
|| ||||||||||||| || || ||||| |||||||| || ||||| ||||| || ||||
Sbjct 1905440 GTGGTATGCAAATCTTCGTCAAGACCCTGACTGGAAAGACCATCACTCTCGAAGTCGAGT 1905381
Query 171917 CGTCAGACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCG 171976
| || ||||| ||||| ||| |||| ||||||| || || ||||| ||||| || || |
Sbjct 1905380 CTTCCGACACGATCGACAACGTCAAGTCCAAGATCCAGGACAAGGAGGGCATCCCCCCGG 1905321
Query 171977 ATCAGCAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATT 172036
| ||||| || || || |||||||| || |||||||| ||||| |||||||| | || |
Sbjct 1905320 ACCAGCAGCGCCTGATCTTTGCTGGAAAGCAGCTTGAGGATGGCCGTACCCTTTCCGACT 1905261
Query 172037 ACAACGTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGGT 172089
||||| ||||||||||||| ||||| || || || || | || || ||||||
Sbjct 1905260 ACAACATTCAAAAGGAGTCCACTCTGCATCTCGTCCTCCGTCTGCGCGGTGGT 1905208
Score = 174 bits (192), Expect = 2e-38
Identities = 405/604 (67%), Gaps = 9/604 (1%)
Strand=Plus/Minus
Query 195387 ACCGTACAACTCCATCGTACGTTGCCTTTACAGATAATGAACGTCTCGTTGGAGATGCCG 195446
|||||| ||||| || ||||| || || | ||| | || ||||||||||| || ||||
Sbjct 837596 ACCGTATTACTCCTTCCTACGTCGCTTTCAACGATGAGGAGCGTCTCGTTGGTGACGCCG 837537
Query 195447 CAAAAAATCAGACAGCTATGAACCCTATCAATACTGTCTTTGACGCGAAGCGTCTTATTG 195506
| || || || | || ||||| |||| || |||||||| |||||||| || |
Sbjct 837536 CCAAGAACCAAGCCGCCGCCAACCCCCTCAACACCATCTTTGACATCAAGCGTCTAATCG 837477
Query 195507 GTCGCAAGTTTTCGGATAAGAAAGTCCAAGACGATATAAAGGACTGGTCTTATGAAGTTG 195566
| |||||||| || ||| | | || || || ||| ||| | | | || |
Sbjct 837476 GCCGCAAGTTCAACGACAAGGACCTTCAGTTTGACATGAAGCACTTCCCCTTCAAGGTCG 837417
Query 195567 TTCCCGGTGTGGCTGATAAGCC-TATGATTAATGTTGAATTTCACGGTGAGAAGAAACAA 195625
| | || | | ||||| |||| | | ||||| | | || | ||
Sbjct 837416 TCAACAA---GGATAACAAGCCGTATG-TCGAGGTTGAGTACAAGGGCTCTACCAAGACC 837361
Query 195626 TTTGCTCCCGAAGAAATTTCGTCTATGGTGTTGATTAAGATGAAGGAGACTGCGGAATCT 195685
|| |||||||||| | || | ||| | || |||||||||||| || || |||
Sbjct 837360 TTCTCTCCCGAAGAGGTCTCTGCCATGATTCTGGGCAAGATGAAGGAGGTCGCTGAGTCT 837301
Query 195686 TTCATGGGTAAAACTGTGAAAGATGCAGTTGTGACTGTACCTGCTTACTTCAGTGATTCA 195745
| | | ||| | ||||| | | || || || ||||| ||||| ||||||| ||| |
Sbjct 837300 TACCTCGGTGAGACTGTTACCCACGCCGTCGTCACTGTCCCTGCCTACTTCAACGATGCT 837241
Query 195746 CAACGACAGGCGACAAAGGACGCTGCTGCTATTGCGGGTCTAAACTGTCTTAGAATTATC 195805
|| || ||||| || ||||| || | | | ||||| || || ||| || | || ||
Sbjct 837240 CAGCGTCAGGCTACCAAGGATGCCGGTACCATTGCCGGCCTCAACATCCTCCGTGTTGTC 837181
Query 195806 AATGAACCAACAGCGGCTGCAATTGCTTATGGTCTGGACAAGAACAAGG--ACGAAGATA 195863
|| || || || || ||||| |||||||| || |||||||||| | | || ||
Sbjct 837180 AACGAGCCCACCGCCGCTGCCATTGCTTACGGCCTGGACAAGACTGACGCCACTGAGCGC 837121
Query 195864 AAAATGTATTGATCTTTGATCTCGGTGGTGGTACGTTTGATGTCTCACTTCTCAATATTG 195923
| || || | | | || || ||||||||||| |||||||| || ||||| |||||
Sbjct 837120 CAGAT-CATCG-TGTACGACCTGGGTGGTGGTACCTTTGATGTTTCTCTTCTGTCTATTG 837063
Query 195924 AAGGTGGTATATTCGAAGTAAAGGCTACTGCTGGTGATACTCATCTAGGTGGTGAAGATT 195983
| | ||| | || || || |||||||||||||| |||||||| |||||||| ||||
Sbjct 837062 AGAGCGGTGTGTTTGAGGTTCGTGCTACTGCTGGTGACACTCATCTGGGTGGTGAGGATT 837003
Query 195984 TCGA 195987
||||
Sbjct 837002 TCGA 836999
>seq10
Length=988720
Score = 158 bits (174), Expect = 2e-33
Identities = 149/190 (78%), Gaps = 0/190 (0%)
Strand=Plus/Minus
Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921
||||| || || || || |||||||| || || || || ||||||||||||||||| ||
Sbjct 887336 ATGCAGATTTTCGTCAAGACCCTTACGGGTAAGACGATTACCCTCGAGGTTGAGTCCTCG 887277
Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981
||||| ||||| || |||| |||||||||| || ||||| |||||||| || || |||
Sbjct 887276 GACACTATCGACAATGTCAAGTCCAAGATTCAGGACAAGGAGGGCATTCCCCCGGACCAG 887217
Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041
|| || || || || |||||||| ||||| || || || || ||||| |||| ||||||
Sbjct 887216 CAGCGCCTGATCTTCGCTGGTAAGCAGCTGGAGGACGGCCGCACCCTGTCTGACTACAAC 887157
Query 172042 GTTCAAAAGG 172051
| || ||||
Sbjct 887156 ATCCAGAAGG 887147
>seq9
Length=1092945
Score = 84.2 bits (92), Expect = 3e-11
Identities = 214/326 (66%), Gaps = 6/326 (2%)
Strand=Plus/Plus
Query 195662 AAGATGAAGGAGACTGCGGAATCTTTCATGGGTAAAACTGTGAAAGATGCAGTTGTGACT 195721
||||||||||||||||| || | | | || || | | || | || || || ||
Sbjct 933989 AAGATGAAGGAGACTGCCGAGGCCTACCTGTCCAAGCCCATCAAGAACGCCGTCGTCACC 934048
Query 195722 GTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCTGCTATTGCG 195781
|| || || ||||||| || || || || ||||| || ||||| |||| |||||
Sbjct 934049 GTTCCGGCCTACTTCAACGACTCCCAGCGCCAGGCAACCAAGGATGCTGGCCAGATTGCC 934108
Query 195782 GGTCTAAACTGTCTTAGAATTATCAATGAACCAACAGCGGCTGCAATTGCTTATGGTCTG 195841
|| || ||| || | | |||| || || || || ||||| | || || || |||
Sbjct 934109 GGCCTGAACGTCCTGCGTGTCGTCAACGAGCCCACTGCCGCTGCCCTGGCCTACGGCCTG 934168
Query 195842 GACAAGAACAAGGACGAAGATAAAAATGTATTGATCTTTGATCTCGGTGGTGGTACGTTT 195901
|||||| | ||| | | || ||| ||||| ||||||||||| |||
Sbjct 934169 GACAAGGAGGCCGACCGCGTT------GTCGCCGTCTACGATCTGGGTGGTGGTACCTTT 934222
Query 195902 GATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCTACTGCTGGTGAT 195961
||| |||| | ||| | || | | || | ||||| || ||| | || |||||
Sbjct 934223 GATATCTCCGTCCTCGAGATCCAGAGCGGCGTCTTCGAGGTCAAGTCCACCAACGGTGAC 934282
Query 195962 ACTCATCTAGGTGGTGAAGATTTCGA 195987
|| || || |||||||| ||||||||
Sbjct 934283 ACCCACCTGGGTGGTGAGGATTTCGA 934308
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 657862301320640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |