Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chalaropsis_20thielavioides_20[genbank_20GCA_5F001599435.1_202016-
03-01] 12 sequences; 23,333,049 total letters
Query= NC_021858.1
Length=1908524
Score E
Sequences producing significant alignments: (Bits) Value
seq3 224 1e-52
seq8 197 2e-44
seq4 190 2e-42
seq2 152 6e-31
seq1 140 4e-27
seq6 89.7 6e-12
seq7 86.0 8e-11
>seq3
Length=3916844
Score = 224 bits (248), Expect = 1e-52
Identities = 287/396 (72%), Gaps = 6/396 (2%)
Strand=Plus/Minus
Query 18093 CACCTTTGGCGAGTCGCACGGGGCGGGCGTCGGCTGCATCATCGACGGCGTGCCGCCGTG 18152
|| ||| || ||||||||||| || ||||||||||||||||||| | |||||| |
Sbjct 2617655 CAGCTTCGGTGAGTCGCACGGCAAGGCCGTCGGCTGCATCATCGACAACCCGCCGCCCGG 2617596
Query 18153 CATGCCACTGGCCGAGGCCGACATCCAGCCTCAGTTGGATCGGCGCCGACCGGGCCAGGG 18212
| | | || ||||| ||||||||||||| ||| || || || |||| |||||| |
Sbjct 2617595 CCTCTCCCTCACCGAGTCCGACATCCAGCCGCAGCTGACGCGCCGGAGACCCGGCCAGAG 2617536
Query 18213 CGCACTTTCCACGCCGCGCAACGAGCCCGATCGCGTCATCATCCAGTCGGGCACGGAGAA 18272
||| | | ||||||||||| || || ||||| | ||| ||| ||| ||
Sbjct 2617535 CGCCATCACGACGCCGCGCAATGAAAAGGACCGCGTGACCATTTTGTCCGGCTGCGAATT 2617476
Query 18273 CGGCCTCACGCTCGGCTCGCCCGTCGGCCTCTTTGTGGCCAACCGCGACCAGCGGCCCGT 18332
||||| |||||||||| | ||| | | ||| || |||| |||||||| |||
Sbjct 2617475 CGGCCGCACGCTCGGCACCCCCATTGCCCTGACCGTCAACAACGAAGACCAGCGCCCCCG 2617416
Query 18333 CGACTATTCCGAC------ATGTGCAAGGTGCCGCGGCCCTCACACGCCGACTACACCTA 18386
|||||| | || ||| |||| | ||||||||||| |||||||||| ||||||
Sbjct 2617415 CGACTACGGCAACCAGACCATGGACAAGTTCCCGCGGCCCTCTCACGCCGACTTCACCTA 2617356
Query 18387 CATGGCCAAGTACGGCATCAAGGCGTCGTCGGGCGGAGGCCGGTCGTCTGCCCGCGAGAC 18446
| ||| |||||| |||||||||| ||||||||||| ||||| ||| || |||||
Sbjct 2617355 CCTGGAAAAGTACAGCATCAAGGCCTCGTCGGGCGGTGGCCGCAGCAGTGCGCGTGAGAC 2617296
Query 18447 CCTCATGCGCGTCGCCGCCGGCGCGGTCGCCGAGAA 18482
| | |||||| ||||| ||||| |||||||||||
Sbjct 2617295 CATTGCGCGCGTGGCCGCTGGCGCCGTCGCCGAGAA 2617260
Score = 114 bits (126), Expect = 2e-19
Identities = 105/133 (79%), Gaps = 0/133 (0%)
Strand=Plus/Minus
Query 19052 CATCGGCGGCACGGTGACGTGCGTGTGTCGCAACGTGCCGGCAGGCCTCGGCGAGCCGTG 19111
|| ||||||||| || || ||||| ||||||||||| | |||||||||||||||
Sbjct 2617019 CACCGGCGGCACCGTCACCTGCGTCATCCGCAACGTGCCCACGGGCCTCGGCGAGCCGGC 2616960
Query 19112 CTTTGACAAGATCGAGGCCGCGCTCGCCCACGCCATGCTGTCGATCCCGGCCACCAAGGG 19171
|||||||||| |||||||| ||| |||||||||||||| ||||| || |||||
Sbjct 2616959 CTTTGACAAGCTCGAGGCCAAGCTAGCCCACGCCATGCTAAGCATCCCCGCTTGCAAGGC 2616900
Query 19172 ATTCGAGATTGGC 19184
|| |||||||||
Sbjct 2616899 CTTTGAGATTGGC 2616887
>seq8
Length=1110981
Score = 197 bits (218), Expect = 2e-44
Identities = 312/447 (70%), Gaps = 15/447 (3%)
Strand=Plus/Plus
Query 1630065 CTGGTCGACGTAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACGAGGCCGTTGGA 1630124
|||||| || ||||| ||||||| ||| ||||| || | ||| || || | ||||||||
Sbjct 324865 CTGGTCAACATAGCGGGCCGTGTTGTTGAAGACACGCAACATAGGAACAATACCGTTGGA 324924
Query 1630125 CTCGCCGTTGGTGCCCGCCACGTAGGCGCCGGCGGCGCGCACCTTGTGCGCGGCAAAGCC 1630184
||||||||||| || | ||||| ||| | ||| || | ||| || | ||
Sbjct 324925 GGTACCGTTGGTGCCGGCAATGTAGGAGCCAGTGGCACGAATGCGGTGGACGTTGAGACC 324984
Query 1630185 GATGCCGCCGGCCGACTTGGAGATGAGCGCGCACTGTTTGAGCGTGTCGTAGATGCCCTC 1630244
||||||||| ||| ||||||||| | || || ||||| || ||||| ||||||||
Sbjct 324985 GATGCCGCCAGCCATCTTGGAGATCATAGCACAAGTCTTGAGGGTATCGTAAATGCCCTC 325044
Query 1630245 GATCGAGTCGGCCTTCATGTCCACGAGAAAGCACGACGAGTTTTGCGGGTGCGCCGTGCC 1630304
|| |||| |||||||||| || |||||||| || || || | || | || ||
Sbjct 325045 AATGCTGTCGTCCTTCATGTCGACTAGAAAGCATGAAGACAGCTGGGCCTGAGGGGTACC 325104
Query 1630305 GGCGTTGAAGAGCGTGGGCGTCGCCGCGGTGAACAACTGCCGCGACATGGCGTCGTAGGT 1630364
|||||||||||| ||||| | ||| ||| || |||| | ||||||| || ||| ||
Sbjct 325105 GGCGTTGAAGAGAGTGGGAGACGCATGGGTAAAGAACTTGCTCGACATGAGGTTGTAAGT 325164
Query 1630365 GGCGAGCACGCGCGCCAGCGCATCGTCCACGTCGGCAAACCCATAGTGGCCGATGGCGAC 1630424
|||| || ||| ||| ||| ||| | |||| | ||||| ||| ||
Sbjct 325165 CTCGAGAACACGCTCCA---CATTGTC----------ACCCCAAA--TGCCGACGGCAAC 325209
Query 1630425 GCGCATGAGCATGTACTGGGGCCGCTCGACGACGACGCCGCGCACCTTGGTCAGGTAGGA 1630484
||||| | ||||| |||||| |||||||| | |||| | ||| |||||||||
Sbjct 325210 ACGCATAATCATGTGCTGGGGACGCTCGACAATCTTGCCGTCGAGCTTAAGCAGGTAGGA 325269
Query 1630485 CCGGCGCATGGTCATGAGGCCAAAGTA 1630511
|| || |||| ||| |||||||||
Sbjct 325270 GCGCTCCAGGGTCTTGAAGCCAAAGTA 325296
Score = 91.5 bits (100), Expect = 2e-12
Identities = 109/148 (74%), Gaps = 0/148 (0%)
Strand=Plus/Plus
Query 1627334 GGTTGACCACGGTAAAGTCGCCCGAGAGCACGCGGCGCGTGTAGATGTTGTTGGTGATGA 1627393
||||||| || || ||||| | || || |||||| ||| |||||| ||| |
Sbjct 323811 GGTTGACAACCTGGAACTCGCCGGCAAGAACACGGCGCTGGTAAATGTTGGAAGTGTAGG 323870
Query 1627394 CCTCGCACGCCTCGGTGTTGCCCAGGATCTGCGACGTCGTGGCCGTGGGCATGAGCGCCA 1627453
||| | |||| |||| ||||||||||||||||| |||| ||||||||| | || |
Sbjct 323871 GCTCAAAGCACTCGTTGTTACCCAGGATCTGCGACGTACTGGCAGTGGGCATGGGTGCAA 323930
Query 1627454 CGAGGAGCGAGTTGCGCAGGCCGTGCTG 1627481
| ||||| |||||||| | ||||||||
Sbjct 323931 CCAGGAGAGAGTTGCGGACACCGTGCTG 323958
>seq4
Length=2525909
Score = 190 bits (210), Expect = 2e-42
Identities = 237/318 (75%), Gaps = 10/318 (3%)
Strand=Plus/Minus
Query 868691 GCCTTGGCGTACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATC 868750
||||| ||| |||||||||||| |||||| |||||||||||||| ||||||||||
Sbjct 2287335 GCCTTTTGGTAGTCGCCCACGCGCTTCTCGAAGAAGTTGGTCTTGCCGCCGAGCGAGATG 2287276
Query 868751 AACTCCATCCACGGGAACGGGTTGGGCGTCTTGTAGTGCTTTTCGCATCCGAGCGACGCG 868810
|||||| | || ||||||| | |||| ||||||| |||||| | ||
Sbjct 2287275 TTCTCCATAAAGTCAAAGGGGTTGGTGGCGCGGTAGACCTTTTCGTTTCCGAGGGCGACG 2287216
Query 868811 AGCAGGCGGTCGGCGACAAACTCGATGTACTGGCACATGAGGCCGGCGTTCATGCCGATG 868870
||||||||||||||||| ||||| |||||||| ||||||| ||||||||||||||| |
Sbjct 2287215 AGCAGGCGGTCGGCGACGAACTCAATGTACTGCTTCATGAGGTCGGCGTTCATGCCGAGG 2287156
Query 868871 AGCGCCAC-CGGCAGCGACTCGCTCACAAACTCTTTCTCGATCTCGACGGCCTCGACGAT 868929
|| ||||| ||||| | |||| ||| ||||| ||||| || |||| || ||| |||
Sbjct 2287155 AG-GCCACAGGGCAGGGCCTCGGTCAGGAACTCCTTCTCAATGACGACAGCATCGGTGAT 2287097
Query 868930 GATCTGCCTGGGCACGTCG---GCCGAGG-GCTTGTTGACGAGCATCGTGTAGAGCAGGC 868985
|||||| || | | | | || | || | ||||||| | | || | | ||||| |
Sbjct 2287096 GATCTG-CTCGACTAGCTGCTTGCTGGGGCGGTTGTTGAGGTG---CGAGAACAGCAGAC 2287041
Query 868986 AGGCAAAGTCGCAGTGCA 869003
||||||||||| |||||
Sbjct 2287040 AGGCAAAGTCGGTGTGCA 2287023
Score = 183 bits (202), Expect = 4e-40
Identities = 216/288 (75%), Gaps = 11/288 (4%)
Strand=Plus/Minus
Query 869180 CCTTCGTCGCGACTGATCATTTCGTTGCTAAAGGCGAGGCCGGGCATGAGGCCGCGCTTC 869239
|| ||||| || ||||| |||||| |||| ||||| |||||||||||||||||
Sbjct 2287020 CCCTCGTCACGCGAGATCAGCTCGTTGGAGAAGGTCAGGCCAGGCATGAGGCCGCGCTTG 2286961
Query 869240 TTGAGCCAAAAGATGGCGCAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAAG 869299
||||| ||||||| | |||| ||||||||| ||||||||||||||||||||||||
Sbjct 2286960 CGCAGCCAGAAGATGGAGGCGAAAGCGCCCGAGAAGAAGATGCCCTCGACGGCGGCAAAG 2286901
Query 869300 CCGATGAGCCGCTCGGCAAAGGTGTCGAGGCCCTCCTTGT---TGATCCACTTCATCGCC 869356
||| || |||| ||||||| ||||| |||||||| |||||||||| | |||
Sbjct 2286900 GCGACCAGGCGCTGGGCAAAG--GTCGA----CTCCTTGTCGGTGATCCACTTGAGGGCC 2286847
Query 869357 CAGTCGGCCTTTTTCCTCACCGACGGCACCGTGTCGATGGCGCGAAAGAGGT-GGTCCTT 869415
||||||||||| | | |||| | || ||||||||| ||||||| ||| |
Sbjct 2286846 CAGTCGGCCTTGCGGCGGATGCACGGGATGGTATCGATGGCGTTGAAGAGGTAGGTGCGC 2286787
Query 869416 TTCGGCCGGGTCCTTGACATAGGTGTCGATCAGGAGCGAATAGGTCTC 869463
| | | || ||||||| || ||||||||||| ||||| || |||||
Sbjct 2286786 TGC-GAGGGCTCCTTGATGTAAGTGTCGATCAGCAGCGAGTACGTCTC 2286740
>seq2
Length=3936381
Score = 152 bits (168), Expect = 6e-31
Identities = 213/296 (72%), Gaps = 2/296 (1%)
Strand=Plus/Plus
Query 1574008 TCGACGTCGTGCGCAAGATCATCAAGCACCACGCCTCCAAGAGGATCGACCTGCCGCCCG 1574067
|||||||||| ||||| |||||| | ||| || | | || ||| || ||||
Sbjct 3664849 TCGACGTCGTTCGCAACCGCATCAAAACCTTTGCCCAGAAAAAGGTCACCCTCCCCCCCG 3664908
Query 1574068 GACGCCACAAGGTGATCATCCTCGACGAGGCCGACTGCCTCACGTCGGCGGCCCAGCAGG 1574127
| ||||| ||| | |||||||||||||| ||||||| | | || |||| ||||| || |
Sbjct 3664909 GCCGCCATAAGCTCATCATCCTCGACGAAGCCGACTCCATGACCTCGGGCGCCCAACAAG 3664968
Query 1574128 CCCTGCGGTCCACCATGGAAAAGCACACCAACACGACGCGCTTTGCCCTGGCGTGCAACA 1574187
||||||| ||||||||||| || ||||||| |||||||||||| | || || |||
Sbjct 3664969 CCCTGCGACGCACCATGGAAATCTACTCCAACACCACGCGCTTTGCCTTTGCCTGTAACC 3665028
Query 1574188 CGTCGTCGATGGTCATCGAGGCCCTCCAAAGTCGCTGCGCCATTCTGCGCTTTGTGCGCC 1574247
||| | | |||||||| | || || ||||||||||| ||||||| || ||||
Sbjct 3665029 AGTCCAACAAGATCATCGAGCCACTGCAGTCGCGCTGCGCCATCCTGCGCTATGGCCGCC 3665088
Query 1574248 TGGGTGACGCCCAGATACGCGCGCGCCT-ATGCGATATTGTCGCCGCCGAAAAGGT 1574302
|| |||| ||| | | |||||| ||| | || ||| |||||||||||
Sbjct 3665089 TGACCGACGAACAGGTCATCAAGCGCCTGCTGC-AAATCATCGAGGCCGAAAAGGT 3665143
Score = 145 bits (160), Expect = 9e-29
Identities = 97/108 (90%), Gaps = 0/108 (0%)
Strand=Plus/Plus
Query 1592186 GCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTTGGGTGCAAGTCTGTGGCCAAC 1592245
||| ||||||| |||||||||||||| ||||| ||| |||| |||||| |||| |||||
Sbjct 1709913 GCCTCCAACTATCTCGACATCAAGCCCCTGCTGGATGTTGGCTGCAAGACTGTCGCCAAT 1709972
Query 1592246 ATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCTTTAACATC 1592293
||||||||||||||||||||||| ||||||||||||||||| ||||||
Sbjct 1709973 ATGATCAAGGGCAAGTCGCCCGAAGAGATCCGCAAGACCTTCAACATC 1710020
Score = 87.8 bits (96), Expect = 2e-11
Identities = 151/217 (70%), Gaps = 7/217 (3%)
Strand=Plus/Minus
Query 733092 GGCGACAAACTGTCGTCGCGCCACGGCCAAAAGGGCACCGTGGGCAG--CGTGCGCTCCA 733149
|||||||| | |||| || ||||| |||||||| || | || ||| | || |
Sbjct 3220534 GGCGACAAGTTTGCGTCTCGTCACGGTCAAAAGGGTACGATTGGTGTGACGTACCGTCAA 3220475
Query 733150 CCGAGGACATGCCCTGGTCGCCGCGCGGCGGCGCCACGCCCGACATCGTGATCAACCCGC 733209
|| |||||||| || |||||| ||| ||||||||||||| | |||||||| |
Sbjct 3220474 --GAAGACATGCC---GTTTACGCGCGAGGGCATCACGCCCGACATCATCATCAACCCCC 3220420
Query 733210 ACGCCATCCCGTCGCGCATGACCATGGGCAAGATGCTCGAGGCCCTCCTGGGCAAGGTGG 733269
||||||| ||||| || |||||||| | | | || ||||| || || | ||||| |
Sbjct 3220419 ACGCCATTCCGTCTCGTATGACCATTGCCCATTTGATCGAGTGTCTTTTGAGTAAGGTTG 3220360
Query 733270 CCTGCCGCGAGGGCTACATCGGCGACGGCACGCCCTT 733306
|| | | ||||| || |||| |||||||||
Sbjct 3220359 CCACGCTCAAGGGCATGGAGGGTGACGCCACGCCCTT 3220323
>seq1
Length=4318234
Score = 140 bits (154), Expect = 4e-27
Identities = 397/604 (66%), Gaps = 17/604 (3%)
Strand=Plus/Minus
Query 1852069 GCTCATCTTGCCGCTCTCGGTGAGGCCCGGCACGAGCGGGTTGAGCAGGTGGAAGCGCTT 1852128
|||||||||||||| | | ||||| ||||| | ||||| | ||||||| |||| ||
Sbjct 4200993 GCTCATCTTGCCGCCC---GACAGGCCGGGCACCATGGGGTTCATCAGGTGGCAGCGGTT 4200937
Query 1852129 CCGATAGCCGAGGACCGGCAGGTGGTCGCGCGCAAAGGCAAATATCTTGCGCTGGTCGCG 1852188
|| ||||||| |||| | |||| ||| | | |||| ||||||||||| ||| |
Sbjct 4200936 CCTGAAGCCGAGCTTGGGCATGGCGTCGTGCGACAGGCCAAAGATCTTGCGCTGATCGAG 4200877
Query 1852189 CCCGCCAAACTGGGCGTCGACGTCGAGGTGCTGCTCGTCGAGGGCCTGCATGAGCGGGTA 1852248
|||||||||| ||||||||| | ||||| || |||||| || |||||| ||||||||
Sbjct 4200876 GCCGCCAAACTCGGCGTCGACCTTGAGGTACTCCTCGTCCAGCAGCTGCATCAGCGGGTA 4200817
Query 1852249 GAGCACGTTGCTCAGGAGCGGGTTGCGGTCCATCTTGACCACCTGAGCGGCGGCCTTTTG 1852308
|| ||| | || | ||| | | ||||| || | || | ||| |
Sbjct 4200816 CAGGCCGTCGGCCATGCACGGCTCACCCATGATCTTAACAATCTCGCTCGAGGC-----G 4200762
Query 1852309 CGCCGTGCCGGTGCGCACGTGCGCC-----GC-GAGTCGGTAGAGGTCGAGCGCGTAGGC 1852362
||| | | || | |||| | || || || || |||||| || ||| |
Sbjct 4200761 CGCAG-GGCGTCGTGCACCGACACCTTTTTGCTCAGACGCAGCAGGTCGCGCATGTACTC 4200703
Query 1852363 GCCGCCGCACTGGTACTCGGTGCCGCGCACAAACTCGAGTCCGCCCAGCGGCACGCCGAT 1852422
| | ||||||| | ||||||||||||||||||| | ||| |||||||
Sbjct 4200702 GGGCGTGAGCTGGTACGAGCTGCCGCGCACAAACTCGAGGCGTGACAGGTCGACGCCGAC 4200643
Query 1852423 GTGCTGGAGCATGGCCTTGATGGCAAACTCGTACCAGCGGCAC-CGGTGTTCGACCAGGT 1852481
| | |||| | |||| |||||| | | || | |||| || | ||
Sbjct 4200642 GGCCGTCAGCAGCGAGCGGATGATGCGCTCGTAGTA-CTGCGCGCGGTTCTCCAGCACAC 4200584
Query 1852482 CCCACGGCGTCTTGCCGTTGTCGAGGTGGGCGTGCACGTCGGCAAAGAGGATCTTGACCC 1852541
| |||| |||| || || ||| |||||||| ||||| | |||||||||||
Sbjct 4200583 TCTCGGGCGCCTTGTCGGCATCCAGGAAGGCGTGCAGATCGGCCAGCAGGATCTTGACGG 4200524
Query 1852542 GACAGCCGGCCTGGAGAAAGTCGGCCAGTTTGAAGATGGGCACAAAGTAGCCTAGGTGCG 1852601
|| |||||||| || || | ||||| |||| | ||||| | ||| | |||||
Sbjct 4200523 TGCACCCGGCCTGCAGGAACTGTGCCAGCTTGATGGCCGGCACGAGGTACGCGGCGTGCG 4200464
Query 1852602 GGTTGCCCGTCGGCGCCGTGCCCCAATATATGATCAGGGGGCGCTCGGCCATGATGGCCT 1852661
| ||| || | |||||||||||||| ||| | | | |||||||| || ||| ||
Sbjct 4200463 GCCGGCCGGTGGTGGCCGTGCCCCAATAGATGCTGATGTCGCGCTCGGGCAGGATCTTCT 4200404
Query 1852662 TGAT 1852665
||||
Sbjct 4200403 TGAT 4200400
>seq6
Length=1530755
Score = 89.7 bits (98), Expect = 6e-12
Identities = 96/127 (76%), Gaps = 0/127 (0%)
Strand=Plus/Minus
Query 450767 AGCGCATGACGCGCACCGGCCGCGTTTGGCCGATGCGGTGCACGCGGTCGACGGCCTGCG 450826
|||||| | |||||| || ||||||||||| | |||||||||||||| | |||||||
Sbjct 97071 AGCGCACGGTGCGCACGGGGCGCGTTTGGCCCAGCCGGTGCACGCGGTCAATAGCCTGCG 97012
Query 450827 CCTCGGCAAACGGATTGTAGTGCGCGTCCATGAGCAGCACATAGTTGGCGCACACGAGGT 450886
||||||| ||| ||||| |||| ||||||| ||| | |||| || | ||||
Sbjct 97011 CCTCGGCCGCCGGGTTGTACTGCGGCTCCATGACGTACACGTTGTTGCCGGCCGTCAGGT 96952
Query 450887 TGAGGCC 450893
|||| ||
Sbjct 96951 TGAGCCC 96945
>seq7
Length=1169112
Score = 86.0 bits (94), Expect = 8e-11
Identities = 64/75 (85%), Gaps = 0/75 (0%)
Strand=Plus/Minus
Query 1726966 GTCGAGGTCGGGGTCGCTGGCCAGGCCCTTCCACCCGACGGTCGTGCGCGGCTTTTCGAC 1727025
||||| |||||||||| || |||||||||||| ||||| ||||||||||||||||| |
Sbjct 585050 GTCGATGTCGGGGTCGTTGATCAGGCCCTTCCAGCCGACAGTCGTGCGCGGCTTTTCCAG 584991
Query 1727026 ATAGGCGCGCATGAC 1727040
|| | |||||||||
Sbjct 584990 GTACGAGCGCATGAC 584976
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 6107138215223804
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