Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chalaropsis_20thielavioides_20[genbank_20GCA_5F001599435.1_202016-
03-01] 12 sequences; 23,333,049 total letters
Query= NC_021923.1
Length=140633
Score E
Sequences producing significant alignments: (Bits) Value
seq8 246 3e-60
seq3 98.7 9e-16
seq10 84.2 2e-11
>seq8
Length=1110981
Score = 246 bits (272), Expect = 3e-60
Identities = 1075/1675 (64%), Gaps = 58/1675 (3%)
Strand=Plus/Plus
Query 138358 ATCTCCCACACGGTCTTGTATAGATCACGAATATGTCGCGGTATTGTTGCA-ATATTTTG 138416
|| |||||||| ||||||||||| | |||| || || | || ||| ||||||||
Sbjct 323669 ATTTCCCACACCGTCTTGTATAGCGCCTTGATATC-CGTGGGAATGCTGCTGATATTTTG 323727
Query 138417 AATGCTCCCGTTGGCCGCAATGATGCGATTTCTCATGTCATCGTTGTACAGATTCAACTT 138476
||| |||||| | |||||||| || || |||||| ||| |||| | |
Sbjct 323728 GATGGAGCCGTTGTCGGCAATGATCCGGTTCTTCATGTTATCAGACCACAGGCCAAGGTC 323787
Query 138477 GATCAAGTCGTTTATCAGATATCTGTTTATGACCTGAAATTCACCGGCCAATACTCGACG 138536
|| | |||| | ||| | ||| | ||||| || || ||||| | || || ||
Sbjct 323788 GACAAGGTCGCGCAGCAGCCAAGGGTTGACAACCTGGAACTCGCCGGCAAGAACACGGCG 323847
Query 138537 AACGTAAATGTTGTTGGTGAAAGGCTCAAACGATTCGTTGTTTCCCAGAATCTGAGCCGT 138596
|||||||||| ||| | |||||||| | |||||||| ||||| ||||| | |||
Sbjct 323848 CTGGTAAATGTTGGAAGTGTAGGGCTCAAAGCACTCGTTGTTACCCAGGATCTGCGACGT 323907
Query 138597 GGTCGCGGTCGGCATGTACGCCACCAAAAGAGAATTCCGTAAACCGTGAAGCTTGATTCG 138656
| || || |||||| || |||| ||||| || || | |||||| |||| ||
Sbjct 323908 ACTGGCAGTGGGCATGGGTGCAACCAGGAGAGAGTTGCGGACACCGTGCTGCTTAATCTT 323967
Query 138657 TTCCTTGAGCGACGACCAGTCCCACAAATCGCTAGGTTTTTTGTTCCACATATCGTACTG 138716
|||||||| || | ||||||||| | |||||| || | | |||||| || | ||
Sbjct 323968 CTCCTTGAGGGAAGTCCAGTCCCAAAGATCGCTGGGCGTCACATCCCACATGTCAAATTG 324027
Query 138717 TAACATTCCCAAACTTGCGGGACTG-----CCTTCGTACGAATCGTATACACCAA-ACTC 138770
| || ||| |||| ||| | || || || | | |||| || | ||
Sbjct 324028 CAGGATGCCC-----TGCGAGACCGGCGAGCCCTCATAAGTAGAGTATGTGCCCTCAGTC 324082
Query 138771 TTGCGCCAACTCGTTGCTCGCCTCGAGCGCACCATAGTAAATAGTTTCGGCAATCTGCTG 138830
| | || | ||| | ||| |||||| | | ||| || || || ||||||||
Sbjct 324083 TGG-GCAATCTCCATTGAGGCCGTCAGCGCAGCGTGGTAGATGGTCTCAAAAATCTGCTT 324141
Query 138831 ATTGAGCAATCGGGCCTCGGCGCTCTCGTACGGCATGCGGAGCATCGTGAACGCGTCGGC 138890
|| ||| || ||||||| ||| | |||||||| || | ||| || || ||
Sbjct 324142 GTTCAGCTGACGAGCCTCGGGAGACTCAAAAGGCATGCGCAGAGCCAGGAAGGCATCAGC 324201
Query 138891 CAGCCCTTGCACGCCCACTCCGACAGGGCGATGGCGCAGATTTGACGCTTTTGC-GGCTT 138949
||| || || || || || || | ||||| ||||||| || ||| ||| ||| |
Sbjct 324202 CAGACCCTGGACACCGACACCAATCGGGCGGTGGCGCATGTT----GCTGTTGTAGGCCT 324257
Query 138950 C---GATAGGATAATAGTTTACATCGATGATTTTGTTTAAATTTCGCACGACCACCTTAG 139006
| || ||| || | ||| ||||| ||||| ||| | || || || || |||| |
Sbjct 324258 CCGTGACAGGGTAGTGGTTCACATCAATGATGCGGTTCAGGTTGCGGACAACGACCTGTG 324317
Query 139007 TCGTATGCTTTAATCGTTCAAAA-TCGTATGTGCCCCCGTTGTCGTCGACGACGTCGACA 139065
| | | | | || | ||| ||| ||||| |||| ||||| ||| || |
Sbjct 324318 T-GACTTCATGAAGCTTTCCAAAGTCGTACTCGCCCTTGTTGTAGTCAAC---------A 324367
Query 139066 AATTTGTTGACACAAATCGAGGCTATGTTGCACACCGCCACTTCGTCGGGGTCGCTGTAT 139125
||| | | || ||||| | ||||||||| || || || |||||| | | |||
Sbjct 324368 AATGAGGGCAGGGCAAGAGAGGCCAGGTTGCACACAGCAACCTCATCGGGGGCACAGTAC 324427
Query 139126 TCGACAATTTCGGCACACAAATTACTACACTTGATCGTACCTAAATTTTGTTGATTGCTT 139185
|||| ||| || | |||| || | || ||||| | || | || |||||
Sbjct 324428 TCGATAATCTCAGTGCACAGGTTGGAGCTGCGAATGGTACCCAGGTTCTTCTGGTTGCTC 324487
Query 139186 TTTCGGTTACAAGCATCTTTGTAAAGCATATACGGTGTGCCAGTTTCCACTTGTGTCTCT 139245
|| ||||| || || |||||||||||| | || ||||||| || || | |||
Sbjct 324488 TTGCGGTTGCAGCTGTCCTTGTAAAGCATAAAGGGATTGCCAGTCTCGGTCTGGGCCTCC 324547
Query 139246 ATAATGAATTTGAACAAGTCCCTAGCTTGTATTTG-ACGCACGTAAAGTTCGTCGCGCTC 139304
| |||| | ||| | | ||||| || | || | | | | || ||
Sbjct 324548 AGAATGGCGTACCACAGCTTCTGAGCTTTGATAACCATGCG-GCCACGGCCTTCCTTTTC 324606
Query 139305 GTACTTTTCGTAGAGTTCGTCGAATCGTTCACCGTAGGCGTCAGAAAGATCGCGACACTT 139364
|||||||||||| || | || || || |||||| ||||| || || | ||||
Sbjct 324607 GTACTTTTCGTACAGAGCTTCAAACTCATCGCCGTAGCAGTCAGCCAGGCCGGGGCACTC 324666
Query 139365 GTCAGGACACATGAGCGACCATACGCCGTTCGCCTTGACGCGCCTCATGAACAGATCCGG 139424
|| || ||||| || | ||| | ||||| || || ||| |||||||||| ||
Sbjct 324667 GTTGGGGCACATCAGAGTCCAGTCCTCGTTCTTCTCAACACGCTTCATGAACAGGTCGCA 324726
Query 139425 AATCCACAAAGCGAACAGCAAATCGCGCGCCTTCTTATCTTCCGAACCCATGTTACGT-T 139483
||||||| ||| | | ||| ||||| || |||||| ||||| | | |
Sbjct 324727 GATCCACAGAGCCAGGAACAAGTCGCGGGCACGAACCTCTTCC-TTTCCATGGTTCTTGC 324785
Query 139484 TCATGTTAAGGAAATCAAAAACGTCAGCGTGCCATGGTTCCAGATAGATGGCCATTGCGC 139543
|| || |||||| ||||| ||||| |||||||| |||||||| || || || | || |
Sbjct 324786 GCAGGTCAAGGAACTCAAACACGTCGGCGTGCCAGGGTTCCAGGTATATAGCAAAGGCAC 324845
Query 139544 CTTTCCG---TTTGCCACCTTGATCGACGTGTCGTACAGCATTATTGAATACGCGCAACA 139600
| ||| |||||||| || || || | || | | || ||||| || |||||||
Sbjct 324846 CGGGCCGCTTGTTGCCACCCTGGTCAACATAGCGGGCCGTGTTGTTGAAGACACGCAACA 324905
Query 139601 TCGGCTCCAGACCGCTCGCTGTTCCGTTGGTGCTACGG--ATG--GGA-CTGTTGCGAGC 139655
| || | | |||| | | || |||||||||| ||| ||| ||| | || ||
Sbjct 324906 TAGGAACAATACCGTTGGAGGTACCGTTGGTGC--CGGCAATGTAGGAGCCAGTG---GC 324960
Query 139656 TCGGACGTCATGTACATTGATGCCGATTCCGCCGCCAAATTTGGATATTAAAACGCAA-T 139714
|| | | || || |||| ||||| ||||| | | ||||| || | | | ||| |
Sbjct 324961 ACGAATGCGGTGGACGTTGAGACCGATGCCGCCAGCCATCTTGGAGATCATAGCACAAGT 325020
Query 139715 CGCGTAATGTCTCGTATATACCTCTTATGCTGTCGTCCTGCATCGTGACCAGAAAGCATG 139774
| | | || ||||| || || ||||||||||||| ||| ||| ||||||||||
Sbjct 325021 CTTG-AGGGTATCGTAAATGCCCTCAATGCTGTCGTCCTTCATGTCGACTAGAAAGCATG 325079
Query 139775 ACGAAAGTTGCGGTAGTTTCGTGCCGGCTGCAAACAGAGTAGGACTCGCGTGCGTGAACA 139834
| || || || | | || ||||| || ||||| ||| ||| || || || |
Sbjct 325080 AAGACAGCTGGGCCTGAGGGGTACCGGCGTTGAAGAGAGTGGGAGACGCATGGGTAAAGA 325139
Query 139835 TTTGTTTCGACATCAATTCGTACGTTTC--GATGGCGCT-CACAATATCCCTTCCGTGGA 139891
| ||||||| | | ||| || || || |||| |||| | || || |
Sbjct 325140 ACTTGCTCGACATGAGGTTGTAAGTCTCGAGAACACGCTCCACATTGTC---ACCCCAAA 325196
Query 139892 TACCGACAGAGACTCGCATCAGCATATGTTGGATCCGTTCGGCCACCGCGCCCTCGAttt 139951
| ||||| | || ||||| | ||| || ||| || ||| | | | ||| |||| |
Sbjct 325197 TGCCGACGGCAACACGCATAATCATGTGCTGGGGACGCTCGACAATCTTGCCGTCGAGCT 325256
Query 139952 ttttCAGATAACCGTTCTCTAGGGTCTTGTAGCCAAAGTACCTATAGTTGAAATC 140006
| ||| || | ||| ||||||||| ||||||||||| |||||||| ||
Sbjct 325257 TAAGCAGGTAGGAGCGCTCCAGGGTCTTGAAGCCAAAGTACTGGTAGTTGAAGTC 325311
>seq3
Length=3916844
Score = 98.7 bits (108), Expect = 9e-16
Identities = 158/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
||||| ||||| | || || || || || || || || || |||||||| || | ||
Sbjct 1905435 ATGCAAATCTTCGTCAAGACCCTGACTGGAAAGACCATCACTCTCGAAGTCGAGTCTTCC 1905376
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
||||| | || | || || |||||||| ||||| || || || || || || ||
Sbjct 1905375 GACACGATCGACAACGTCAAGTCCAAGATCCAGGACAAGGAGGGCATCCCCCCGGACCAG 1905316
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
|| || |||||||||| || || ||||| |||||| | | | | || || || |||
Sbjct 1905315 CAGCGCCTGATCTTTGCTGGAAAGCAGCTTGAGGATGGCCGTACCCTTTCCGACTACAAC 1905256
Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930
||||||||||| || || || || | || | || ||||||| ||
Sbjct 1905255 ATTCAAAAGGAGTCCACTCTGCATCTCGTCCTCCGTCTGCGCGGTGG 1905209
Score = 87.8 bits (96), Expect = 2e-12
Identities = 147/213 (69%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 24719 AAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACCGACACAGTAGAAACG 24778
|| || || || || || || || || |||||||| || || | || || | || |
Sbjct 1905135 AAGACCCTGACTGGAAAGACCATAACTCTCGAAGTCGAGTCCTCTGATACCATTGACAAC 1905076
Query 24779 GTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAACAACGTTTGATCTTT 24838
|| || |||||||||||||| || || || || || || || || ||| | || ||
Sbjct 1905075 GTCAAGTCCAAGATCCAAGACAAGGAGGGCATCCCCCCGGACCAGCAGCGTCTCATTTTC 1905016
Query 24839 GCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAACATTCAAAAGGAATCG 24898
|| || || ||||| |||||| | | | ||||| || ||||| || ||||||||
Sbjct 1905015 GCTGGCAAGCAGCTTGAGGATGGTCGCACTCTCTCAGACTACAACATCCAGAAGGAATCT 1904956
Query 24899 ACACTACACTTGGTGTTGCGATTGCGCGGAGGC 24931
|| || || |||| |||| |||| ||||||
Sbjct 1904955 ACTCTGCATCTGGTTCTGCGTCTGCGTGGAGGC 1904923
>seq10
Length=988720
Score = 84.2 bits (92), Expect = 2e-11
Identities = 133/191 (70%), Gaps = 0/191 (0%)
Strand=Plus/Minus
Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762
||||||||| || | || || || || ||||| || ||||| ||||| || || || |
Sbjct 887337 GATGCAGATTTTCGTCAAGACCCTTACGGGTAAGACGATTACCCTCGAGGTTGAGTCCTC 887278
Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822
||||| | || | || || ||||| || ||||| || || || || || || ||
Sbjct 887277 GGACACTATCGACAATGTCAAGTCCAAGATTCAGGACAAGGAGGGCATTCCCCCGGACCA 887218
Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882
|| || ||||||| || || || ||||||||||| | | | |||| || || ||
Sbjct 887217 GCAGCGCCTGATCTTCGCTGGTAAGCAGCTGGAGGACGGCCGCACCCTGTCTGACTACAA 887158
Query 24883 CATTCAAAAGG 24893
||| || ||||
Sbjct 887157 CATCCAGAAGG 887147
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 449897532515360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |