Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chalaropsis_20thielavioides_20[genbank_20GCA_5F001599435.1_202016-
03-01] 12 sequences; 23,333,049 total letters
Query= NC_021924.1
Length=129052
Score E
Sequences producing significant alignments: (Bits) Value
seq2 113 4e-20
>seq2
Length=3936381
Score = 113 bits (124), Expect = 4e-20
Identities = 214/313 (68%), Gaps = 4/313 (1%)
Strand=Plus/Minus
Query 34321 GTCTCCGGGTTGTCACATTCCGGACACAACACAAACTTGCGGATGAAACCATCAAGCAGG 34380
||||| ||||| | || | | |||| ||||||||| |||||||||| | ||
Sbjct 1499330 GTCTCAGGGTTCTTGCACTTCTTGCACAGAACAAACTTGACAATGAAACCATAGACGTGG 1499271
Query 34381 TCCTGTAACTTAACGGAGTCGTGGGAGCCGTTGACGATGAATCGTTCGTTTTTGTAATCG 34440
||||| | ||| || ||| ||||||||||||| ||| | || || | | ||
Sbjct 1499270 TCCTGCAGCTTCTTGGTGTCATGGGAGCCGTTGATGATCCAGCGGTCATCCGGGGGGTCA 1499211
Query 34441 ACCTGCGTTTGCGCGCCCAGCTCGCACCCGAAGTACTTTGTCGGGTAAATGGCCGGACGT 34500
| | || || || || ||||| | || |||||||| || ||| | || ||
Sbjct 1499210 ATGTTGGTCTGGGCACCGAGCTCAAAGCCAAAGTACTTGATCAGGTGGGCACCAGGGCGG 1499151
Query 34501 CCAAGCGCCTTGGCGATTTCGGGCATGTTGACGATGACAGTCTTGATGCCGTTGCCCTTT 34560
|||| | || ||||| | | || |||||||| ||||||||||| ||||| |||||
Sbjct 1499150 GCAAGAGACTGGGCGACGGCAGACAGGTTGACGACAACAGTCTTGATACCGTTACCCTTG 1499091
Query 34561 CCTTCGACCTTGG--CGCAGATGCGCGGCATTTTGTAGCGGTAGAACGCGTCCGCCACAT 34618
|| |||| ||||| ||||| || ||||| ||||| ||||||||| ||| | | |
Sbjct 1499090 CCCTCGATCTTGGTTTGCAGA--CGGGGCATCTTGTACCGGTAGAACTGGTCGGAGATGT 1499033
Query 34619 TGCGGTTAACGTT 34631
| |||| |||||
Sbjct 1499032 CGGGGTTGACGTT 1499020
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 412841539621916
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |