Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chalaropsis_20thielavioides_20[genbank_20GCA_5F001599435.1_202016-
03-01] 12 sequences; 23,333,049 total letters
Query= NC_023423.1
Length=610033
Score E
Sequences producing significant alignments: (Bits) Value
seq2 100 1e-15
>seq2
Length=3936381
Score = 100 bits (110), Expect = 1e-15
Identities = 122/163 (75%), Gaps = 5/163 (3%)
Strand=Plus/Plus
Query 309684 CTCCATCAACTTGGCGATAGTCATACGAGAAGGAATGGCAAGAGGGTTGATGAGAATGTC 309743
||| ||||| | ||| || ||||||||||| |||||||| | |||||||||| |||||
Sbjct 3220379 CTCGATCAAATGGGCAATGGTCATACGAGACGGAATGGCGTGGGGGTTGATGATGATGTC 3220438
Query 309744 AGGTCTCATTCCGGTGATTGGGTTGAAAGGCATATCTTCTTCA-GGTACAATCAAACCAA 309802
|| | || || | | | || ||||| ||||||| | ||||| ||| |||||
Sbjct 3220439 GGGCGTGATGCCCTCG---CGCGTAAACGGCATGTCTTCTTGACGGTAC-GTCACACCAA 3220494
Query 309803 TAGTTCCCTTTTGAGCGTGCCTGGAAGCAAACTTGTCACCAAT 309845
| || ||||||||| |||| | || ||||||||||| |||||
Sbjct 3220495 TCGTACCCTTTTGACCGTGACGAGACGCAAACTTGTCGCCAAT 3220537
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1951974099883936
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |