Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chalaropsis_20thielavioides_20[genbank_20GCA_5F001599435.1_202016- 03-01] 12 sequences; 23,333,049 total letters Query= NC_023423.1 Length=610033 Score E Sequences producing significant alignments: (Bits) Value seq2 100 1e-15 >seq2 Length=3936381 Score = 100 bits (110), Expect = 1e-15 Identities = 122/163 (75%), Gaps = 5/163 (3%) Strand=Plus/Plus Query 309684 CTCCATCAACTTGGCGATAGTCATACGAGAAGGAATGGCAAGAGGGTTGATGAGAATGTC 309743 ||| ||||| | ||| || ||||||||||| |||||||| | |||||||||| ||||| Sbjct 3220379 CTCGATCAAATGGGCAATGGTCATACGAGACGGAATGGCGTGGGGGTTGATGATGATGTC 3220438 Query 309744 AGGTCTCATTCCGGTGATTGGGTTGAAAGGCATATCTTCTTCA-GGTACAATCAAACCAA 309802 || | || || | | | || ||||| ||||||| | ||||| ||| ||||| Sbjct 3220439 GGGCGTGATGCCCTCG---CGCGTAAACGGCATGTCTTCTTGACGGTAC-GTCACACCAA 3220494 Query 309803 TAGTTCCCTTTTGAGCGTGCCTGGAAGCAAACTTGTCACCAAT 309845 | || ||||||||| |||| | || ||||||||||| ||||| Sbjct 3220495 TCGTACCCTTTTGACCGTGACGAGACGCAAACTTGTCGCCAAT 3220537 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1951974099883936