Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chalaropsis_20thielavioides_20[genbank_20GCA_5F001599435.1_202016- 03-01] 12 sequences; 23,333,049 total letters Query= NC_023639.1 Length=1168989 Score E Sequences producing significant alignments: (Bits) Value seq3 89.7 4e-12 >seq3 Length=3916844 Score = 89.7 bits (98), Expect = 4e-12 Identities = 97/129 (75%), Gaps = 0/129 (0%) Strand=Plus/Plus Query 432282 TTGAGAGGTAAAGAAGGTCGTATTAGAGGAAATTTGATGGGAAAGCGTGTCGATATGTCT 432341 |||| ||||| || |||||| || | || || ||||||| |||||||||||| | ||| Sbjct 2390046 TTGAAGGGTAAGGAGGGTCGTCTTCGTGGTAACCTGATGGGTAAGCGTGTCGATTTCTCT 2390105 Query 432342 GCACGTACAGTTATTACTTCTGATCCTAATATTGCTCTCAATGAAGTTGGTGTTCCTCTC 432401 ||||||||||| |||||| ||| | || | || | | || || |||||||| | | Sbjct 2390106 GCACGTACAGTCATTACTGGCGATGCCAACCTGTCTTTGGACGAGGTCGGTGTTCCCCGC 2390165 Query 432402 ATTATTGCG 432410 | ||||||| Sbjct 2390166 AGTATTGCG 2390174 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3740629810850712