Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chalaropsis_20thielavioides_20[genbank_20GCA_5F001599435.1_202016-
03-01] 12 sequences; 23,333,049 total letters
Query= NC_024625.1
Length=151109
Score E
Sequences producing significant alignments: (Bits) Value
seq8 268 9e-67
seq4 233 2e-56
seq3 113 4e-20
seq10 96.9 3e-15
>seq8
Length=1110981
Score = 268 bits (296), Expect = 9e-67
Identities = 1128/1754 (64%), Gaps = 69/1754 (4%)
Strand=Plus/Plus
Query 148053 GACTGGCTCTGGTCAATGAACGCGCCACGGTCAGCGGCCATTTCAATGA--GT-CGCTTT 148109
|||||| ||||||||| || || || ||||| || ||||| | || | || ||||
Sbjct 323606 GACTGGGACTGGTCAATAAAGGCACCGCGGTCGGCAGCCATCTGAACAACCGTACGCTG- 323664
Query 148110 ATCTTCATCTCCCAGGCCGTCTTGTACAGCCGCTTGATATGATCGGGAATGCCGTCGATG 148169
| || ||||| |||||||||| ||| |||||||| |||||||| | |||
Sbjct 323665 --CGAAATTTCCCACACCGTCTTGTATAGCGCCTTGATATCCGTGGGAATGCTGCTGATA 323722
Query 148170 CGCTGCACCGAGCCGCGGTGCGCAAAAATCTGATTGCGCATTTCGTCCGTGTATAGGTTG 148229
|| | |||||| || |||| ||| | || ||| | || | | |||
Sbjct 323723 TTTTGGATGGAGCCGTTGTCGGCAATGATCCGGTTCTTCATGTTATCAGACCACAGGCCA 323782
Query 148230 AGCTCGATCAGGTCATCGATCAGATACTGATTCACCACCTGAAACTCGCCGGCGAGCACG 148289
|| |||| ||||| | ||| | | || || ||||| ||||||||||| || ||
Sbjct 323783 AGGTCGACAAGGTCGCGCAGCAGCCAAGGGTTGACAACCTGGAACTCGCCGGCAAGAACA 323842
Query 148290 CGCCGCAGATACACGTTGCTCGTAAACGGTTCAAACGACTCGTTGTTGCCCAAAATCTGC 148349
|| ||| | || | |||| || | || ||||| |||||||||| |||| ||||||
Sbjct 323843 CGGCGCTGGTAAATGTTGGAAGTGTAGGGCTCAAAGCACTCGTTGTTACCCAGGATCTGC 323902
Query 148350 GCGGTCGTTGCCGTGGGCATGTACGCTACCAGCAGCGAGTTGCGCAAACCGCGATTTTTT 148409
| || | || ||||||||| || ||||| || |||||||| | |||| | | ||
Sbjct 323903 GACGTACTGGCAGTGGGCATGGGTGCAACCAGGAGAGAGTTGCGGACACCGTGCTGCTTA 323962
Query 148410 ATTTTGCGCTTCAGAGCCGCCCAGTCCC--AGAGCGGCGACGGTGTCACGTTCCACATGT 148467
|| || ||| || | | |||||||| ||| || | || ||||| | ||||||||
Sbjct 323963 ATCTTCTCCTTGAGGGAAGTCCAGTCCCAAAGATCGCTG--GGCGTCACATCCCACATGT 324020
Query 148468 CGTACTGCAGAATGCCGCGGCTAG-CGGGGCTGCCCTCGTACGAGCTGTACGGTCCGTGC 148526
| | ||||| ||||| | || || | || |||||| || | ||| | || |
Sbjct 324021 CAAATTGCAGGATGCC-CTGCGAGACCGGCGAGCCCTCATAAGTAGAGTATGTGCCCTCA 324079
Query 148527 GCCGCCGCCAGTTCGCAGCTCGCCTCGAGCGCGCCGTAGTAAATCGTCTCGGCAATTTGC 148586
| | || | || ||| ||||| ||| ||| || ||||| ||| |||
Sbjct 324080 GTCTGGGCAATCTCCATTGAGGCCGTCAGCGCAGCGTGGTAGATGGTCTCAAAAATCTGC 324139
Query 148587 CTGTTGAGCAGCGCCGCCGACTCG---CTTTCGTACGGCATACGCAGCCGCACAAACGCG 148643
|||| ||| | || | |||| || | ||||| ||||| || || ||
Sbjct 324140 TTGTTCAGC--TGACG-AGCCTCGGGAGACTCAAAAGGCATGCGCAGAGCCAGGAAGGCA 324196
Query 148644 TCGGCAAGGCCCTGTACGCCCACGCCAATGGGCCGGTGTTTAATGTTGGAGAGGCGCGCG 148703
|| || || ||||| || || || ||||| || ||||| |||||| | | ||
Sbjct 324197 TCAGCCAGACCCTGGACACCGACACCAATCGGGCGGTGGCGCATGTTGCTGTTGTAGGCC 324256
Query 148704 CTCTCGAGCGGATAGTGGTTGCGGTCGATGATCTTGTCAAGATTGCGCACCACCACCTTT 148763
| || || |||||||| || ||||| || || ||||| || || |||| |
Sbjct 324257 TCCGTGACAGGGTAGTGGTTCACATCAATGATGCGGTTCAGGTTGCGGACAACGACCTGT 324316
Query 148764 GTAATTCTGCGCAGCAATTCAAAATCGTAC---------TTGTCATCTACGATGCATCGG 148814
|| | | | ||| | |||| |||||| |||| || || | || |
Sbjct 324317 GTGACTTCATGAAGCTTTCCAAAGTCGTACTCGCCCTTGTTGTAGTCAACAA---ATGAG 324373
Query 148815 TTCACGGCGATAGAGGCTAGATTGCACACGGCCGTCTCATCCGGGGCGCTGTACTCTACG 148874
|| ||| | |||||| || |||||||| || |||||| ||||| | |||||| |
Sbjct 324374 GGCAGGGCAAGAGAGGCCAGGTTGCACACAGCAACCTCATCGGGGGCACAGTACTCGATA 324433
Query 148875 ATCTCGGCGCACAGATT---GCTGCATTTGATCACGCCCACGTTCTTTTGATTGCTCTTG 148931
||||| | |||||| || ||||| || | |||| |||||| || |||||||||
Sbjct 324434 ATCTCAGTGCACAGGTTGGAGCTGCGAATGGT---ACCCAGGTTCTTCTGGTTGCTCTTG 324490
Query 148932 CTGTTGCACGCGTCCTTGTACAGCATGTACGGTCCGCCAGTTTCCACCTGCGTTTCCACT 148991
| |||||| ||||||||| ||||| | || |||||| || ||| | ||||
Sbjct 324491 CGGTTGCAGCTGTCCTTGTAAAGCATAAAGGGATTGCCAGTCTCGGTCTGGGCCTCCAGA 324550
Query 148992 AT---GAACCGATGCAGGTCCTGCGCGCGCA----CTTGCTGCTCGTAGCGACCCTCCTG 149044
|| | ||| ||| | ||| || | | ||| || || || ||||
Sbjct 324551 ATGGCGTACC---ACAGCTTCTGAGCTTTGATAACCATGCGGC----CACGGCCTTCCTT 324603
Query 149045 CTCGTA--TAAAGTATACAGCCGCTCGAACGCCTCGCCGTAGCAATCGTCGAGACCGGGG 149102
||||| | ||| | ||| || ||| | ||||||||||| || | || ||||||
Sbjct 324604 TTCGTACTTTTCGTACAGAGC--TTCAAACTCATCGCCGTAGCAGTCAGCCAGGCCGGGG 324661
Query 149103 CACTTGTGCGGGCACATGAGCGACCACACGCCGTCCGCGTACACGCGCTTCATAAACAGA 149162
|||| || |||||||| || | ||| | ||| | | || |||||||| |||||
Sbjct 324662 CACTCGTTGGGGCACATCAGAGTCCAGTCCTCGTTCTTCTCAACACGCTTCATGAACAGG 324721
Query 149163 TCGGGCACCCAGAGCGCGTACATGAGGTCGCGCGCCTTGCAGTCTTCGGCGCCCATGTTG 149222
||| | ||| || || | | |||||| || ||||| || |||
Sbjct 324722 TCGCAGATCCACAGAGCCAGGAACAAGTCGCGGGCACGAACCTCTTCCTTTCCATGGTTC 324781
Query 149223 CGGCGCAGGTTGAGCACGCTGAATATGTCCGCGTGCCACGGCTCAATGTACACCGCGAGC 149282
|||||||| || | || | ||| |||||||| || || | ||| | || |
Sbjct 324782 TTGCGCAGGTCAAGGAACTCAAACACGTCGGCGTGCCAGGGTTCCAGGTATATAGCAAAG 324841
Query 149283 GCGCCCTTGCGC---TTGCCGCCCTGGTCGACGTGGCGCACCATGTTGTTAAACACTCGA 149339
|| || ||| ||||| |||||||| || | ||| || ||||||| || || ||
Sbjct 324842 GCACCGGGCCGCTTGTTGCCACCCTGGTCAACATAGCGGGCCGTGTTGTTGAAGACACGC 324901
Query 149340 ACCATAGGTTCAATGCCACTGGCAGTGCCGTTAGTAGAGCTAATGCGACTGCCGCGCGCT 149399
| |||||| |||| || ||| || ||||| || | |||| ||| ||
Sbjct 324902 AACATAGGAACAATACCGTTGGAGGTACCGTTGGTGCCGGCAATGTAGGAGCCAGTGGCA 324961
Query 149400 CGCACTTTGTGCACGTTGACGCCGATGCCGCC-GCCGTACTTTGAGATGGCCGCGC-AGT 149457
|| | ||| ||||||| ||||||||||| ||| | ||| ||||| || | |||
Sbjct 324962 CGAATGCGGTGGACGTTGAGACCGATGCCGCCAGCCAT-CTTGGAGATCATAGCACAAGT 325020
Query 149458 CGCCGAGCGTCGAGTAGATGCCCTCGATGCTGTCGCGCTTCATGGTCAGCAGAAAGCACG 149517
| ||| || ||| |||||||| ||||||||| ||||||| | |||||||| |
Sbjct 325021 C-TTGAGGGTATCGTAAATGCCCTCAATGCTGTCGTCCTTCATGTCGACTAGAAAGCATG 325079
Query 149518 AGCACATTTGCGGAAAACGCGTGCCGGCCGCGAACATGGTGGGGCTGGCGTGTGTAAA-A 149576
| ||| || | | | || ||||| ||| | ||||| || || ||||| |
Sbjct 325080 AAGACAGCTGGGCCTGAGGGGTACCGGCGTTGAAGAGAGTGGGAGACGCATGGGTAAAGA 325139
Query 149577 TATTTCTGGCTCATCATCTCGTACGACTCGAGCACGCGGTCCA---TGTCATCGCCATGG 149633
|| || | ||| | | ||| | |||||| || || |||| ||||| | |||
Sbjct 325140 ACTTGCTCG-ACATGAGGTTGTAAGTCTCGAGAACACGCTCCACATTGTCA-CCCCA--A 325195
Query 149634 ATGCCTATGGCGACGCGCATCAGCATATGCTGCGGTCGCTCCGCCACTTTGTTTCCAATT 149693
||||| | ||| || ||||| | ||| ||||| || ||||| | | ||| | |
Sbjct 325196 ATGCCGACGGCAACACGCATAATCATGTGCTGGGGACGCTCGACAATCTTGCCGTCGAGC 325255
Query 149694 TTGAGCAAGTAGCCGTTTTCTAGTGTCTTGTAGCCAAAGTACTTGTAGTCAAAGTCGCGG 149753
|| |||| |||| | || || |||||| |||||||||||| ||||| ||||| |||
Sbjct 325256 TTAAGCAGGTAGGAGCGCTCCAGGGTCTTGAAGCCAAAGTACTGGTAGTTGAAGTCACGG 325315
Query 149754 CCGTGGTCAATGGC 149767
||| |||||||
Sbjct 325316 TCGTACACAATGGC 325329
Score = 107 bits (118), Expect = 2e-18
Identities = 140/191 (73%), Gaps = 2/191 (1%)
Strand=Plus/Plus
Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGC 133521
||||||||| ||||| || ||||| ||| || ||| | | | ||||| ||||||||||
Sbjct 478912 GGTGGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCA-TCCTCAAGCTGCTTGC 478970
Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581
| || | || || ||||||||||| || || ||||| |||||||| |||||| ||
Sbjct 478971 CAGCAAAGATCAGGCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGACT 479030
Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641
||| | || | |||||| | | ||| || || | ||| | ||| || || ||||| |
Sbjct 479031 TGACGTTGTCGATCGTGTCCGAAGACTCGACCTCTAGGGTAATGGTCTTACCCGTCAGGG 479090
Query 133642 TTTTTACGAAA 133652
| || ||||||
Sbjct 479091 TCTTGACGAAA 479101
>seq4
Length=2525909
Score = 233 bits (258), Expect = 2e-56
Identities = 376/523 (72%), Gaps = 23/523 (4%)
Strand=Plus/Minus
Query 120354 GTACTCGCCGACGCGTTTCTCAAAAAAGTTTGTTTTGCCCTCCATCGAAATGTTGTTCAT 120413
||| ||||| ||||| ||||| || ||||| || ||||| | | ||| ||||| | |||
Sbjct 2287327 GTAGTCGCCCACGCGCTTCTCGAAGAAGTTGGTCTTGCCGCCGAGCGAGATGTTCTCCAT 2287268
Query 120414 AAACTCGAACGGGTTGCT--CGCGTTAAAGTATTTCGGCTGGCCCAACTGTACGAGCAGT 120471
||| || || |||||| | |||| || | ||||| | || | ||||||||
Sbjct 2287267 AAAGTCAAAGGGGTTGGTGGCGCGGTAGACCTTTTCGTTT--CCGAGGGCGACGAGCAGG 2287210
Query 120472 CGGTCCGCTACAAACTCAATGTACTCGCACATGGACTGCGCGTTCATGCCCAGCAACGCC 120531
||||| || || ||||||||||||| |||| | ||||||||||| || | |||
Sbjct 2287209 CGGTCGGCGACGAACTCAATGTACTGCTTCATGAGGTCGGCGTTCATGCCGAGGAG-GCC 2287151
Query 120532 ACCGG-CAACGCCGACGTGAAAAACTCCTTCTCAATGTCCACCGCCTCCTTGAACATG-G 120589
|| || || ||| || | ||||||||||||||| | || || || ||| || |
Sbjct 2287150 ACAGGGCAGGGCCTCGGTCAGGAACTCCTTCTCAATGACGACAGCATCGGTGATGATCTG 2287091
Query 120590 CGAGCATAG-TG-TGGCCGGGCATCTTGTGTTCGATGCGCGTTCGGTAGTACAGGCACGC 120647
| | ||| || | || ||| |||| | | |||| | | | || |||||||
Sbjct 2287090 CTCGACTAGCTGCTTGCTGGGGCGGTTGT-TGAGGTGCGAGAACAGCAG-ACAGGCA--- 2287036
Query 120648 AAAGTCCGTGTGCAGGCCCTCGTCGCGCGATATCAGCTCGTTGCTAAACGTCAGGCCGGG 120707
||||| ||||||||||||||||| ||||| |||||||||||| || |||||||| ||
Sbjct 2287035 -AAGTCGGTGTGCAGGCCCTCGTCACGCGAGATCAGCTCGTTGGAGAAGGTCAGGCCAGG 2286977
Query 120708 CATGATGCCTTTCGTCTTG---ATGTAGAATATGGCGGC-AAAGCTGCCCGAAAAGAACA 120763
||||| ||| || |||| | |||| |||| ||| ||||| |||||| ||||| |
Sbjct 2286976 CATGAGGCCG--CG-CTTGCGCAGCCAGAAGATGGAGGCGAAAGC-GCCCGAGAAGAAGA 2286921
Query 120764 CGCCCTCCACGATGGCAAAGGCGACCATGCGCTCGGCCAACGTCGCCGTCTTGCTGTCGA 120823
|||||| ||| |||||||||||||| ||||| ||| || |||| | |||| | ||
Sbjct 2286920 TGCCCTCGACGGCGGCAAAGGCGACCAGGCGCTGGGCAAAGGTCGACTCCTTGTCGGTGA 2286861
Query 120824 TCCACTTCATGGCCCACTCGGCCTTTTTGCGCACGCACGGCAT 120866
||||||| | |||||| |||||||| ||| | |||||| ||
Sbjct 2286860 TCCACTTGAGGGCCCAGTCGGCCTTGCGGCGGATGCACGGGAT 2286818
>seq3
Length=3916844
Score = 113 bits (124), Expect = 4e-20
Identities = 132/176 (75%), Gaps = 2/176 (1%)
Strand=Plus/Plus
Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522
|||||||||||||| || ||||| ||| | || | | | ||||| |||||||| ||
Sbjct 1905467 GTGGACTCTTTCTGGATGTTGTAGTCGGAAAGGGTACGGCCA-TCCTCAAGCTGCTTTCC 1905525
Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582
|| | || || ||||||||||| ||||||||||| |||||||| |||||| |||
Sbjct 1905526 AGCAAAGATCAGGCGCTGCTGGTCCGGAGGGATGCCCTCCTTGTCCTGGATCTTGGACTT 1905585
Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCA 133638
|| | || | |||||||| | ||||| || | ||||| ||| ||||||||||
Sbjct 1905586 GACATTGTCGATCGTGTCGGAAGTTTCCACCTCAAGGGTGATGGTCTTGCCGGTCA 1905641
Score = 107 bits (118), Expect = 2e-18
Identities = 138/188 (73%), Gaps = 2/188 (1%)
Strand=Plus/Plus
Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522
|| || || ||||| || ||||| || | ||| ||| | ||||| |||||||||||
Sbjct 1904954 GTAGATTCCTTCTGGATGTTGTAGTCTGAGAGAGTGCGACCA-TCCTCAAGCTGCTTGCC 1905012
Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582
||| ||||||| ||||||||||| || |||||||| |||||||| |||||| |||
Sbjct 1905013 AGCGAAAATGAGACGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCTTGGATCTTGGACTT 1905072
Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642
|| | |||| || || | || ||| || |||| || | ||| || || ||||| ||
Sbjct 1905073 GACGTTGTCAATGGTATCAGAGGACTCGACTTCGAGAGTTATGGTCTTTCCAGTCAGGGT 1905132
Query 133643 TTTTACGA 133650
|| ||||
Sbjct 1905133 CTTGACGA 1905140
Score = 107 bits (118), Expect = 2e-18
Identities = 144/198 (73%), Gaps = 2/198 (1%)
Strand=Plus/Plus
Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522
|||||||| || || || ||||| ||| | || | | | ||||| |||||||| ||
Sbjct 1905239 GTGGACTCCTTTTGAATGTTGTAGTCGGAAAGGGTACGGCCA-TCCTCAAGCTGCTTTCC 1905297
Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582
|| | || || ||||||||||| || |||||||| |||||||| |||||| |||
Sbjct 1905298 AGCAAAGATCAGGCGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGGATCTTGGACTT 1905357
Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642
|| | || | |||||||| | ||| || |||| |||| ||| || || ||||| ||
Sbjct 1905358 GACGTTGTCGATCGTGTCGGAAGACTCGACTTCGAGAGTGATGGTCTTTCCAGTCAGGGT 1905417
Query 133643 TTTTACGAAAATCTGCAT 133660
|| ||||| || |||||
Sbjct 1905418 CTTGACGAAGATTTGCAT 1905435
>seq10
Length=988720
Score = 96.9 bits (106), Expect = 3e-15
Identities = 115/156 (74%), Gaps = 0/156 (0%)
Strand=Plus/Plus
Query 133505 GTCCTCGAGCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTT 133564
|||||| |||||||| || ||| | || || ||||||||||| || || ||||| |||||
Sbjct 887181 GTCCTCCAGCTGCTTACCAGCGAAGATCAGGCGCTGCTGGTCCGGGGGAATGCCCTCCTT 887240
Query 133565 GTCGGTGATCTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGAC 133624
||| ||||| ||||| | || | ||||| | || ||| || |||| ||| |
Sbjct 887241 GTCCTGAATCTTGGACTTGACATTGTCGATAGTGTCCGAGGACTCAACCTCGAGGGTAAT 887300
Query 133625 GGTTTTGCCGGTCAGAGTTTTTACGAAAATCTGCAT 133660
|| || || || || || || ||||||||||||||
Sbjct 887301 CGTCTTACCCGTAAGGGTCTTGACGAAAATCTGCAT 887336
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 483420727486880
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