Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chalaropsis_20thielavioides_20[genbank_20GCA_5F001599435.1_202016- 03-01] 12 sequences; 23,333,049 total letters Query= NC_026268.1 Length=139132 Score E Sequences producing significant alignments: (Bits) Value seq4 82.4 7e-11 >seq4 Length=2525909 Score = 82.4 bits (90), Expect = 7e-11 Identities = 128/182 (70%), Gaps = 2/182 (1%) Strand=Plus/Minus Query 110712 GCTCGATGATATTATTGTTCACGATGACGTCGGCGGCAGCGAAAAAGGCGAGAACGTGTT 110771 |||||| || || | ||| |||||| |||||| || ||||| |||||||| | ||| Sbjct 2286662 GCTCGACGAGGTTCTCGTTGACGATGCCGTCGGATGCGGCGAAGAAGGCGAGGATGTGCG 2286603 Query 110772 TAAGAAAGAATCGTTCCTTGTCGTTCAGTTTATTGTTCCAGTCTTCAAAGTCCTTGGACA 110831 | ||| | |||| | | |||||| ||||||||||| | || ||||||||||| Sbjct 2286602 AGATGAAGTACTGTTCATCCTTGTTCAGGCGGTTGTTCCAGTCGTGAAGGTCCTTGGACA 2286543 Query 110832 TGTCGATCTCTTCGACCTTCCAGTGACAATCGACCGCCTTCTTGTACGATTGCCAAAGAT 110891 ||| || || ||| | ||||| | | | |||||||||||| |||| |||| Sbjct 2286542 GGTCAATTTCCTCGGCAGTCCAGAAGGACGCCTCGGCCTTCTTGTACATCTGCC--AGAT 2286485 Query 110892 CT 110893 || Sbjct 2286484 CT 2286483 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445094333235840