Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chalaropsis_20thielavioides_20[genbank_20GCA_5F001599435.1_202016-
03-01] 12 sequences; 23,333,049 total letters
Query= NC_026421.1
Length=182380
Score E
Sequences producing significant alignments: (Bits) Value
seq2 100 3e-16
>seq2
Length=3936381
Score = 100 bits (110), Expect = 3e-16
Identities = 276/422 (65%), Gaps = 37/422 (9%)
Strand=Plus/Plus
Query 147006 CATGTAGGTGAGCAGCGAGTAGCTGGCTATGTTGAAGGGGACCCCCAGGCCCATGTCCCC 147065
||||| || ||||| ||||| ||| ||||||||||| || |||||||||||||| |
Sbjct 849985 CATGTGTGTAAGCAGAGAGTACGAGGCAATGTTGAAGGGTACACCCAGGCCCATGTCGCA 850044
Query 147066 CGACCTCTGGTACAGCTGGCA---CGAGAG---------------CTCCCCGTCG----- 147102
||||| ||||| | |||||| | | | ||| || ||
Sbjct 850045 CGACCGTTGGTAGAACTGGCAGTGCAAATGGCCTTTGGGCTTTTCCTCGCCCTCCTTTGC 850104
Query 147103 GCC----------ACGTAAAACTGGCACAGGATGTGGCACGGCGGCAGCGCCATGGCGGG 147152
||| ||||| |||||| | || || ||||||||||| |||||
Sbjct 850105 GCCGGGATATGAAACGTAGAACTGGGCAAACATATGACACGGCGGCAGGGCCATCTTCTT 850164
Query 147153 CAGGTCCGCGGGGTTCCAGGCCGAGACCACCAGCCGCCTGCTC-TCGGGGTTCCTCTTAA 147211
||||| ||||||||||| || | | | |||| | || | || || |||| |
Sbjct 850165 TAGGTCTGCGGGGTTCCACGCGCTCATTATAATGCGCC-GATCGTACGGATTGGTCTTGA 850223
Query 147212 TCTCTTCGATAACC-CACCTCAGCTGGTCCACGCCCTGGCCCCCGTAGTTTGTCCCGCAG 147270
|| | ||| ||| | || |||||||| || || | |||| ||||| || | |
Sbjct 850224 GCTTGTGGATGACCTCGGCT-AGCTGGTCGACACCTTTGCCCGTGTAGTCCGTTTTGGCG 850282
Query 147271 TCCACGTACCTGGCCCCAAAGTGCCTCCACTGGAAGCCGTACACTGGCCCCAGGTCGCCG 147330
|| |||||| ||| ||||| || | ||| |||||||||||||| || |||||||| |||
Sbjct 850283 TCTACGTACTCGGCGCCAAAATGGCGCCATTGGAAGCCGTACACGGGGCCCAGGTCTCCG 850342
Query 147331 GGCTTTCTGTGCGAGAAGCCCGCCCGCTTGAGAAACTCGGGGGACCCGTGGGCGTCCCAG 147390
|| | ||| || |||| | | | ||||||||| | || |||| | | ||||||
Sbjct 850343 ACCTCGCGGTGGCCGAGGCCCACGCTGTCGAGAAACTCCCGCGAGCCGTTGCCATCCCAG 850402
Query 147391 AT 147392
||
Sbjct 850403 AT 850404
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 583487912476800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |