Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chalaropsis_20thielavioides_20[genbank_20GCA_5F001599435.1_202016-
03-01] 12 sequences; 23,333,049 total letters
Query= NC_026922.1
Length=157977
Score E
Sequences producing significant alignments: (Bits) Value
seq3 129 6e-25
seq8 113 5e-20
seq10 102 8e-17
>seq3
Length=3916844
Score = 129 bits (142), Expect = 6e-25
Identities = 154/209 (74%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 134505 ACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCG 134564
||||| || || ||||| ||||||||||||||||||||| || ||| | || ||
Sbjct 1905227 ACGAGATGCAGAGTGGACTCCTTTTGAATGTTGTAGTCGGAAAGGGTACGGCCATCCTCA 1905286
Query 134565 AGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGA 134624
||||| || || ||||| |||| |||||||| || || || ||||| || || || ||
Sbjct 1905287 AGCTGCTTTCCAGCAAAGATCAGGCGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGG 1905346
Query 134625 ATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTA 134684
|| || ||||| ||| | |||||||| || || || |||||||| ||||| ||
Sbjct 1905347 ATCTTGGACTTGACGTTGTCGATCGTGTCGGAAGACTCGACTTCGAGAGTGATGGTCTTT 1905406
Query 134685 CCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
|| || | || || ||||| ||||||||
Sbjct 1905407 CCAGTCAGGGTCTTGACGAAGATTTGCAT 1905435
Score = 104 bits (114), Expect = 2e-17
Identities = 153/217 (71%), Gaps = 0/217 (0%)
Strand=Plus/Plus
Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546
||||| | || |||| || || || || || |||||||| || |||||||||||
Sbjct 1904924 CCTCCACGCAGACGCAGAACCAGATGCAGAGTAGATTCCTTCTGGATGTTGTAGTCTGAG 1904983
Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606
| ||| || || || ||||| ||||| || ||||| | ||||||||| || || ||
Sbjct 1904984 AGAGTGCGACCATCCTCAAGCTGCTTGCCAGCGAAAATGAGACGCTGCTGGTCCGGGGGG 1905043
Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666
||||| || || ||||| || || ||||| ||| | || || || || || ||
Sbjct 1905044 ATGCCCTCCTTGTCTTGGATCTTGGACTTGACGTTGTCAATGGTATCAGAGGACTCGACT 1905103
Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGA 134703
|||||||| ||||| || || || | || || ||||
Sbjct 1905104 TCGAGAGTTATGGTCTTTCCAGTCAGGGTCTTGACGA 1905140
Score = 100 bits (110), Expect = 3e-16
Identities = 144/203 (71%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546
|| || | ||| || | ||||| || || ||||| || || || |||||||||||| |
Sbjct 1905437 CCACCACGGAGACGGAGGACGAGATGCAGAGTGGACTCTTTCTGGATGTTGTAGTCGGAA 1905496
Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606
| ||| | || || ||||| || || ||||| |||| |||||||| || || ||
Sbjct 1905497 AGGGTACGGCCATCCTCAAGCTGCTTTCCAGCAAAGATCAGGCGCTGCTGGTCCGGAGGG 1905556
Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666
||||| || || || || || || ||||| ||| | |||||||| | ||||||
Sbjct 1905557 ATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATCGTGTCGGAAGTTTCCACC 1905616
Query 134667 TCGAGAGTAATGGTTTTACCGGT 134689
|| || || ||||| || |||||
Sbjct 1905617 TCAAGGGTGATGGTCTTGCCGGT 1905639
>seq8
Length=1110981
Score = 113 bits (124), Expect = 5e-20
Identities = 151/210 (72%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGA 134555
|| |||| || ||||| || ||||| ||||| || |||||||||||| | |||| |
Sbjct 478892 AGACGCAGAACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGG 478951
Query 134556 GAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCT 134615
|| || ||||| ||||| ||||| |||| |||||||| || || || ||||| ||
Sbjct 478952 CCATCCTCAAGCTGCTTGCCAGCAAAGATCAGGCGCTGCTGGTCCGGGGGAATGCCCTCC 479011
Query 134616 TTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTA 134675
|| || || || || ||||| ||| | ||||| || || || || || || |||
Sbjct 479012 TTGTCCTGGATCTTGGACTTGACGTTGTCGATCGTGTCCGAAGACTCGACCTCTAGGGTA 479071
Query 134676 ATGGTTTTACCGGTTAAAGTTTTAACGAAA 134705
||||| ||||| || | || || ||||||
Sbjct 479072 ATGGTCTTACCCGTCAGGGTCTTGACGAAA 479101
>seq10
Length=988720
Score = 102 bits (112), Expect = 8e-17
Identities = 139/194 (72%), Gaps = 0/194 (0%)
Strand=Plus/Plus
Query 134524 CCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAA 134583
|||| || ||||||||||| | |||| | ||| || ||||| || || || || |
Sbjct 887147 CCTTCTGGATGTTGTAGTCAGACAGGGTGCGGCCGTCCTCCAGCTGCTTACCAGCGAAGA 887206
Query 134584 TCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGT 134643
||| |||||||| || || || ||||| || || || ||||| || ||||| ||
Sbjct 887207 TCAGGCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGAATCTTGGACTTGACATTGT 887266
Query 134644 CCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGA 134703
| | ||||| || || || || ||||| ||||| || ||||| || | || || ||||
Sbjct 887267 CGATAGTGTCCGAGGACTCAACCTCGAGGGTAATCGTCTTACCCGTAAGGGTCTTGACGA 887326
Query 134704 AAATTTGCATTTTG 134717
|||| ||||| |||
Sbjct 887327 AAATCTGCATCTTG 887340
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 505398324190240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |