Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chalaropsis_20thielavioides_20[genbank_20GCA_5F001599435.1_202016-
03-01] 12 sequences; 23,333,049 total letters
Query= NC_027923.1
Length=132831
Score E
Sequences producing significant alignments: (Bits) Value
seq8 93.3 4e-14
seq3 93.3 4e-14
>seq8
Length=1110981
Score = 93.3 bits (102), Expect = 4e-14
Identities = 199/294 (68%), Gaps = 5/294 (2%)
Strand=Plus/Plus
Query 131741 AAGTCCAAAATGTCCGCATGCCAGGGTTCCAAATACACTGCCATTGCGCCTTTGCGC--- 131797
|| || || | ||| || ||||||||||||| || | || | || || |||
Sbjct 324797 AACTCAAACACGTCGGCGTGCCAGGGTTCCAGGTATATAGCAAAGGCACCGGGCCGCTTG 324856
Query 131798 TTACCGCCTTGATTAACATGACGAACCATGTTGTTGTATACGCGCAACATGGGCTCCAAA 131857
|| || || || | ||||| || || |||||||| | || |||||||| || | | |
Sbjct 324857 TTGCCACCCTGGTCAACATAGCGGGCCGTGTTGTTGAAGACACGCAACATAGGAACAATA 324916
Query 131858 CCGTTGGCGTTTCCATTGGTGCTCTTAATGTAGCTGCCATTGGCTCTGATTTTGTGAACG 131917
||||||| | | || ||||||| ||||||| |||| |||| | || ||| |||
Sbjct 324917 CCGTTGGAGGTACCGTTGGTGCCGGCAATGTAGGAGCCAGTGGCACGAATGCGGTGGACG 324976
Query 131918 TTGAGTCCAATACCTCC-GCCGTATTTAGAGATTAGTGCGCATTTGGTTAGAGTGTTATA 131976
||||| || || || || ||| | || ||||| | || || | | || || | ||
Sbjct 324977 TTGAGACCGATGCCGCCAGCCAT-CTTGGAGATCATAGCACAAGTCTTGAGGGTATCGTA 325035
Query 131977 GATACCTTCCACGCTGTCCGCGGCAATGTCGACTAAAAAGCAAGAGGACAACTG 132030
|| || || | |||||| | |||||||||| |||||| || |||| |||
Sbjct 325036 AATGCCCTCAATGCTGTCGTCCTTCATGTCGACTAGAAAGCATGAAGACAGCTG 325089
>seq3
Length=3916844
Score = 93.3 bits (102), Expect = 4e-14
Identities = 150/216 (69%), Gaps = 0/216 (0%)
Strand=Plus/Plus
Query 27020 GCCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCT 27079
|||||| |||| |||| |||| ||| | ||||| || || || || ||||||||
Sbjct 1904923 GCCTCCACGCAGACGCAGAACCAGATGCAGAGTAGATTCCTTCTGGATGTTGTAGTCTGA 1904982
Query 27080 CATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGG 27139
| |||| | || || ||||| || || ||| ||||||||||||| || ||||| ||
Sbjct 1904983 GAGAGTGCGACCATCCTCAAGCTGCTTGCCAGCGAAAATGAGACGCTGCTGGTCCGGGGG 1905042
Query 27140 CACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAAC 27199
| ||||| || || ||||||| || | | | || | || || | || || ||
Sbjct 1905043 GATGCCCTCCTTGTCTTGGATCTTGGACTTGACGTTGTCAATGGTATCAGAGGACTCGAC 1905102
Query 27200 TTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCAC 27235
||| |||||||| | || || ||||| || || ||
Sbjct 1905103 TTCGAGAGTTATGGTCTTTCCAGTCAGGGTCTTGAC 1905138
Score = 87.8 bits (96), Expect = 2e-12
Identities = 156/228 (68%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080
|| ||||||| || | || | ||| | || || || |||||||| |||||||||
Sbjct 1905209 CCACCGCGCAGACGGAGGACGAGATGCAGAGTGGACTCCTTTTGAATGTTGTAGTCGGAA 1905268
Query 27081 ATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGC 27140
| | | || | || || ||||| || || || | || || ||||| || ||||| ||
Sbjct 1905269 AGGGTACGGCCATCCTCAAGCTGCTTTCCAGCAAAGATCAGGCGCTGCTGGTCCGGGGGG 1905328
Query 27141 ACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACT 27200
| ||||| || || ||||||| || | | | || | ||||| | | || |||
Sbjct 1905329 ATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATCGTGTCGGAAGACTCGACT 1905388
Query 27201 TCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248
|| ||||| || | || || ||||| || || || ||||||||||||
Sbjct 1905389 TCGAGAGTGATGGTCTTTCCAGTCAGGGTCTTGACGAAGATTTGCATA 1905436
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 424934337853344
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |