Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chalaropsis_20thielavioides_20[genbank_20GCA_5F001599435.1_202016-
03-01] 12 sequences; 23,333,049 total letters
Query= NC_027925.1
Length=496396
Score E
Sequences producing significant alignments: (Bits) Value
seq4 125 2e-23
>seq4
Length=2525909
Score = 125 bits (138), Expect = 2e-23
Identities = 349/524 (67%), Gaps = 11/524 (2%)
Strand=Plus/Plus
Query 443349 GAGGAGATTGATCTCTCCAAGGACTTGGCCGATTGGAACGAACGACT-ATCTAGCCATGA 443407
||||| ||||| || ||||||||| | ||| |||||| | || || | | || ||||
Sbjct 2286530 GAGGAAATTGACCTGTCCAAGGACCTTCACGACTGGAACAACCGCCTGAACAAGG-ATGA 2286588
Query 443408 ACGCGATTTCTTCAAATGCATCTTGGCCTTCTTTGCACCGAGCGACGGTATCGTCGGTGA 443467
|| | ||| || |||| | |||||||| || | |||||| |||||| ||
Sbjct 2286589 ACAGTACTTCATCTCGCACATCCTCGCCTTCTTCGCCGCATCCGACGGCATCGTCAACGA 2286648
Query 443468 GAATCTGGTGACGCGTTTCTACGAAATGGTAGTGTACACCGAGGCCCGCTACTTCTACGC 443527
||| || || |||||||| || ||| | | |||||||||||| ||||||||
Sbjct 2286649 GAACCTCGTCGAGCGTTTCTCCGGCGAGGTCCAGATCCCCGAGGCCCGCTGCTTCTACGG 2286708
Query 443528 GTTCCAAGCCGCAATGGAGAACATTCACGCCGAGGTCTACAGTCAGTTGATCAAGACACT 443587
||||| | ||||||||||| ||| ||||| ||| | | ||||| ||||||
Sbjct 2286709 CTTCCAGATCATGATGGAGAACATCCACTCCGAGACGTACTCGCTGCTGATC--GACACT 2286766
Query 443588 AATTCCGAACGAAGACGAACAGCGGTCCATCTTCT-CATCGT--TCATGACCACGCCAGG 443644
| | || || | ||||| || | ||| || || || |||| || |
Sbjct 2286767 TACATC-AAGGAGCCCTCGCAGCGCACCTACCTCTTCAACGCCATCGATACCATCCCGTG 2286825
Query 443645 CATCACTGAAAAGACTCGCTGGGCAAAACAGTGGCTCGAACGAGAAAATCTC-AGCTTCG 443703
|||| ||| | |||||| ||||| || | ||| || || | ||| |
Sbjct 2286826 CATCCGCCGCAAGGCCGACTGGGCCCTCAAGTGGATC-ACCGACAAGGAGTCGACCTTTG 2286884
Query 443704 TCGAGCGACTAGTCGCTTTTGCTGTGGTCGAAGGACTGTTGTTTAGCGGCAGCTTTAGCC 443763
| |||| || ||||| ||||| | ||||| || | || || ||| ||||| |||
Sbjct 2286885 CCCAGCGCCTGGTCGCCTTTGCCGCCGTCGAGGGCATCTTCTTCTCGGGC-GCTTTCGCC 2286943
Query 443764 TCCATCTTCTGGTTGAAAAAGCGTGGACTTATGCACGGTCTGACCTTTAGTAACGAACTG 443823
|||||||||||| || ||||| || || |||| || |||||||| ||||| |||
Sbjct 2286944 TCCATCTTCTGGCTGCGCAAGCGCGGCCTCATGCCTGGCCTGACCTTCTCCAACGAGCTG 2287003
Query 443824 ATCAGTCGGGACGAGGGTTTGCATTGCGACTTCGCCTGTCTTCT 443867
||| || |||||||| |||| |||||| |||||||| ||
Sbjct 2287004 ATCTCGCGTGACGAGGGCCTGCACACCGACTTTGCCTGTCTGCT 2287047
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1588335755793340
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |