Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chalaropsis_20thielavioides_20[genbank_20GCA_5F001599435.1_202016-
03-01] 12 sequences; 23,333,049 total letters
Query= NC_028091.1
Length=196300
Score E
Sequences producing significant alignments: (Bits) Value
seq8 114 2e-20
>seq8
Length=1110981
Score = 114 bits (126), Expect = 2e-20
Identities = 685/1084 (63%), Gaps = 33/1084 (3%)
Strand=Plus/Plus
Query 110706 GGTAGATGTTTGTTGTGTATGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGG 110765
|||| ||||| | ||||| || |||||||| || || ||||||| ||| || | ||
Sbjct 323850 GGTAAATGTTGGAAGTGTAGGGCTCAAAGCACTCGTTGTTACCCAGGATCTGCGACGTAC 323909
Query 110766 AGGCTGTTGGCATTGGTGCCATCAAAAGACTGTTACGAAGACCCTTCTCCTTGATGCGTT 110825
||| || ||||| ||||| | || ||| ||| || | ||| | || ||| || |
Sbjct 323910 TGGCAGTGGGCATGGGTGCAACCAGGAGAGAGTTGCGGACACCGTGCTGCTTAATCTTCT 323969
Query 110826 CCTTGAGAACATCCCAGTCGTAGTTGA--GCTTGGTTTCACCTTCCCACATGTCAAACTG 110883
||||||| | |||||| | || ||| || |||| | ||||||||||||| ||
Sbjct 323970 CCTTGAGGGAAGTCCAGTCCCAAA-GATCGCTGGGCGTCACAT-CCCACATGTCAAATTG 324027
Query 110884 AAGCACCCCTTGGGACGCGGGAGAACCCTCAAAGGTTTCATAGGAACCTTGGGCTTCAGC 110943
|| | || || || | || || |||||| | || || | || | | | ||
Sbjct 324028 CAGGATGCCCTGCGAGACCGGCGAGCCCTCATAAGTAGAGTATGTGCCCTCAGTCTGGGC 324087
Query 110944 CAATTCACAGCTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCAT 111003
| || ||| ||| | ||||| || ||||| ||||| || | ||||
Sbjct 324088 AATCTCCATTGAGGCCGTCAGCGCAGCGTGGTAGATGGTCTCAAAAATCTGCTTGTTCAG 324147
Query 111004 CTCCTTGGCTTCATCTGAATCAAA-----TGCGTAGCGGCACAAAATAAATACATCCGCG 111058
|| || || || ||||| |||| || | || || |||| ||
Sbjct 324148 CTGACGAGCCTCGGGAGACTCAAAAGGCATGCGCAGAGCCAGGAAGG-----CATCAGCC 324202
Query 111059 AGACCTTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTCA 111118
||||| || ||||| | |||||| || | ||| ||||| || || || |
Sbjct 324203 AGACCCTGGACACCGACACCAATCGGGCGGTGGCGCATGTTGCTGTTGTAGGCCTCCGTG 324262
Query 111119 ACGGGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATT 111178
|| || || || ||||||| ||||| || || | ||| | || ||||| |
Sbjct 324263 ACAGGGTAGTGGTTCACATCAATGATGCGGTTCAGGTTGCGGACAACGACCTGTGTGACT 324322
Query 111179 TCATGAAGTTTTTCATAATCAAAAGTGCGAGTCTCTTCATTGACATACTTTGGAAGGGCG 111238
|||||||| ||| || | || | || | | | | ||| | || |||||
Sbjct 324323 TCATGAAGCTTTCCAAAGTCGTACTCGCCCTTGTTGTAGTCAACAAATGAGGGCAGGGCA 324382
Query 111239 ATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTA 111298
| || |||| ||||| ||||| |||||| | |||||| | ||| || ||
Sbjct 324383 AGAGAGGCCAGGTTGCACACAGCAACCTCATCGGGGGCACAGTACTCGATAATCTCAGTG 324442
Query 111299 CATAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTCTTGTTGCACGCA 111358
|| | |||||| || ||| || |||| ||||| ||||| ||||| ||||||
Sbjct 324443 CACAGGTTGGAGCTGCGAATGGTACCCAGGTTCTTCTGGTTGCTCTTGCGGTTGCAGCTG 324502
Query 111359 TCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGAATAGCCTTCCAA 111418
|||||||| ||||| |||| | || ||||| ||||| | | ||||| || | |||
Sbjct 324503 TCCTTGTAAAGCATAAAGGGATTGCCAGTCTCGGTCTGGGCCTCCAGAATGGCGTACCAC 324562
Query 111419 A-CATCGGCGGCTGGT--ACAATGGCGTTGGCCCGTCCCTCCGCCTCGTACTTTGTGTAG 111475
| | || | | | | || ||| || | | || || ||| ||||||||| |||
Sbjct 324563 AGCTTCTGAGCTTTGATAACCATG-CG--GCCACGGCCTTCCTTTTCGTACTTTTCGTAC 324619
Query 111476 AGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCTGGACAGAAA 111535
|| ||||||||||| || || ||| | || || || || || || || |
Sbjct 324620 AGAGCTTCAAACTCATCGCCGTAGCAGTCAGCCAGGCCGGGGCACTCGTTGGGGCACATC 324679
Query 111536 AGAGACCATTGACCACCTTC--CTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGG 111593
|||| ||| | || | ||| |||||| ||||||||||| ||||| |||||||| |
Sbjct 324680 AGAGTCCAGT--CCTCGTTCTTCTCAACACGCTTCATGAACAGGTCGCAGATCCACAGAG 324737
Query 111594 --ATGAAAAGAGATCTCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAG 111651
| ||| | || || | ||| ||||||| | || ||||| || | |||||
Sbjct 324738 CCAGGAACA-AG-TCGCGGGCACGAACCTCTTCCTTTCCATGGTTCTTGCGCAGGTCAAG 324795
Query 111652 GAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATC----CCTTTC 111707
|||||| | | || |||||||| || || || || | || | | | || |
Sbjct 324796 GAACTCAAACACGTCGGCGTGCCAGGGTTCCAGGTATATAGCAAAGGCACCGGGCCGCTT 324855
Query 111708 GACGCCCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAA 111767
| | ||| | || | |||||||| || ||| ||| || || || | ||| |||| ||
Sbjct 324856 GTTG-CCACCCTGGTCAACATAGCGGGCCGTGTTGTTGAAGACACGCAACATAGGAACAA 324914
Query 111768 TACC 111771
||||
Sbjct 324915 TACC 324918
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 628031905795200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |