Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chalaropsis_20thielavioides_20[genbank_20GCA_5F001599435.1_202016-
03-01] 12 sequences; 23,333,049 total letters
Query= NC_028092.1
Length=193301
Score E
Sequences producing significant alignments: (Bits) Value
seq8 179 5e-40
seq4 159 4e-34
>seq8
Length=1110981
Score = 179 bits (198), Expect = 5e-40
Identities = 853/1334 (64%), Gaps = 31/1334 (2%)
Strand=Plus/Plus
Query 118143 TTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCAGATAGATATTGGTCGTGTATGGC 118202
|||||||| ||||| || || || || | | | || || |||| ||||| |||
Sbjct 323813 TTGACAACCTGGAACTCGCCGGCAAGAACACGGCGCTGGTAAATGTTGGAAGTGTAGGGC 323872
Query 118203 TCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAGGCTGTGGGCATGGGTGCCATG 118262
||||||||||| |||||||||| ||| || | || ||| |||||||||||||| |
Sbjct 323873 TCAAAGCACTCGTTGTTACCCAGGATCTGCGACGTACTGGCAGTGGGCATGGGTGCAACC 323932
Query 118263 AGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTCCTTGAGAGCGTCCCAGTCGTAG 118322
|| || ||| |||| ||| | | | |||| |||||||| | |||||| |
Sbjct 323933 AGGAGAGAGTTGCGGACACCGTGCTGCTTAATCTTCTCCTTGAGGGAAGTCCAGTCCCAA 323992
Query 118323 TTGAGCTTTGT-CTCCCCCTGCCACATATCAAACTGGAGGATACCTTGGGACGCTGGCGA 118381
|| | || | | | | |||||| ||||| || ||||| || || || | |||||
Sbjct 323993 A-GATCGCTGGGCGTCACATCCCACATGTCAAATTGCAGGATGCCCTGCGAGACCGGCGA 324051
Query 118382 TCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCCAATTCG---GAGCTCGCCTCGAG 118438
|||||| | || |||| ||||||| || || | || ||| || | ||
Sbjct 324052 GCCCTCATAAGTAGAGTATGTGCCCTCAGTCTGGGCAATCTCCATTGAGGCCGTC---AG 324108
Query 118439 GGCTGCGTGATACATTGTTTCAAAAATGCGAGCATTCAT-TGCCTTGGCCTCGTCGGAAT 118497
|| ||||| || || || |||||||| | |||| || | | ||||| || |
Sbjct 324109 CGCAGCGTGGTAGATGGTCTCAAAAATCTGCTTGTTCAGCTGACGAG-CCTCGGGAGACT 324167
Query 118498 CAAACGCGAGTCGGCACAAA-ATAAATACATCCGCGAGACCTTGGACACCGAGGCCAATT 118556
|||| | | || || | | || |||| || ||||| |||||||||| |||||
Sbjct 324168 CAAAAGGCATGCG-CAGAGCCAGGAAGGCATCAGCCAGACCCTGGACACCGACACCAATC 324226
Query 118557 GGGCGATGTCTCATATTAGACTTCCGAGCGGTCTCC---ACGGGATAAAAATTCCTATCG 118613
||||| || | ||| || || || |||| || || || ||| |||
Sbjct 324227 GGGCGGTGGCGCATGTTGCTGTTGTAGGC---CTCCGTGACAGGGTAGTGGTTCACATCA 324283
Query 118614 ATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGCTTTTCGTAATCA 118673
|| | | || || || | || |||| ||||| ||||||||||||| | | ||
Sbjct 324284 ATGATGCGGTTCAGGTTGCGGACAACGACCTGTGTGACTTCATGAAGCTTTCCAAAGTCG 324343
Query 118674 AAACTGCGAGTCTCTTCATTGACATACTTAGGAAGGGCGATTGACGCCAGATTACACACA 118733
| || | | | | ||| | || ||||| | || ||||| || ||||||
Sbjct 324344 TACTCGCCCTTGTTGTAGTCAACAAATGAGGGCAGGGCAAGAGAGGCCAGGTTGCACACA 324403
Query 118734 GAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTGCACAAGTTTGAACTCTTAATG 118793
| |||||| || |||||| ||||| || ||||||| ||| || || ||||
Sbjct 324404 GCAACCTCATCGGGGGCACAGTACTCGATAATCTCAGTGCACAGGTTGGAGCTGCGAATG 324463
Query 118794 GTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAAAGCATGTATGGC 118853
|| |||| |||||| || || ||| ||| || |||||||||||||| | ||
Sbjct 324464 GTACCCAGGTTCTTCTGGTTGCTCTTGCGGTTGCAGCTGTCCTTGTAAAGCATAAAGGGA 324523
Query 118854 GTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCAGA-CATCGGCAGCTGGCACAGT 118912
| || ||||| || |||| || ||||| || | ||| | | || | |||| | |
Sbjct 324524 TTGCCAGTCTCGGTCTGGGCCTCCAGAATGGCGTACCACAGCTTCTG-AGCTTTGATAAC 324582
Query 118913 GGCGTTGGCTCGCCCCTCTTCCTCGTACTTTGTGTAGAGGGCTTCAAACTCTTCACCCAC 118972
| | | || || || | ||||||||| ||| || ||||||||||| || ||
Sbjct 324583 CATGCGGCCACGGCCTTCCTTTTCGTACTTTTCGTACAGAGCTTCAAACTCATCGCCGTA 324642
Query 118973 GGCCTCTGAGAGCCCTGGTGCCTTATCTGGGCAGAAGAGAGACCATTGACCACCCTCCTC 119032
| || | || || || || | ||||| | |||| ||| | | || |||
Sbjct 324643 GCAGTCAGCCAGGCCGGGGCACTCGTTGGGGCACATCAGAGTCCAGTCCTCGTTCTTCTC 324702
Query 119033 AACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCGCCGAGAAGAGATCCCGACAGCGAGC 119092
||| ||||||||||| ||||| |||||| || ||| ||| | || || ||| |
Sbjct 324703 AACACGCTTCATGAACAGGTCGCAGATCCACAGAGCCAGGAACAAGTCGCGGGCACGAAC 324762
Query 119093 TTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGG 119152
||||| | || || || |||| || | || || | | || |||||||| ||
Sbjct 324763 CTCTTCCTTTCCATGGTTCTTGCGCAGGTCAAGGAACTCAAACACGTCGGCGTGCCAGGG 324822
Query 119153 TTCCAGGTACACCGCGATTG-ACC---CCTTACGACGACCAGCCTGGTTTACATACCTCG 119208
||||||||| | || | | ||| || | | ||| |||||| ||||| | |
Sbjct 324823 TTCCAGGTATATAGCAAAGGCACCGGGCCGCTTGTTG-CCACCCTGGTCAACATAGCGGG 324881
Query 119209 CAGTGGCGTTAAATACACGAAGCATTGGAATGATACCATCGGATTGGCCATTTGTCCCCC 119268
| ||| ||| || ||||| | ||| |||| ||||| | ||| || || || ||
Sbjct 324882 CCGTGTTGTTGAAGACACGCAACATAGGAACAATACCGTTGGAGGTACCGTTGGTGCCGG 324941
Query 119269 GAA--TACGAGACTTATTGGCTCTGACATCGTGGATGTGCATACCAATACCCCCTGCCCA 119326
|| || ||| | | |||| | | ||||| || | ||| || || || |||
Sbjct 324942 CAATGTAGGAGCC--AGTGGCACGAATGCGGTGGACGTTGAGACCGATGCCGCCAGCCAT 324999
Query 119327 CTTTGAGATTTGCGCGCACTCCGTGAGACTGCCGTAGATCCCATCGATCGAGTCACCCTT 119386
||| ||||| || || | |||| | |||| || || || || ||| ||||
Sbjct 325000 CTTGGAGATCATAGCACAAGTCTTGAGGGTATCGTAAATGCCCTCAATGCTGTCGTCCTT 325059
Query 119387 ATTTGCGATGAGGAAGCAGCTCGACATTTGAGGCCTG-GGTGTACCAGCGTTGAAGAGAG 119445
| ||| || ||||| |||| || |||||| || ||||| |||||||||||||
Sbjct 325060 CATGTCGACTAGAAAGCATGAAGACAGCTG-GGCCTGAGGGGTACCGGCGTTGAAGAGAG 325118
Query 119446 TTGGTGTCGCGTGG 119459
| || | ||| |||
Sbjct 325119 TGGGAGACGCATGG 325132
>seq4
Length=2525909
Score = 159 bits (176), Expect = 4e-34
Identities = 528/810 (65%), Gaps = 11/810 (1%)
Strand=Plus/Minus
Query 129728 TAGTCCCCAACCCGCTTCTCGAAGAAGTTTGTCTTCCCGTCCAAGCT-GATATTCTCCAT 129786
||||| || || ||||||||||||||||| ||||| ||| || ||| ||| ||||||||
Sbjct 2287326 TAGTCGCCCACGCGCTTCTCGAAGAAGTTGGTCTTGCCG-CCGAGCGAGATGTTCTCCAT 2287268
Query 129787 AAAATCAAATGGGTTCTTTGAGTTCCAAATTGCTGGCACTCCAATCTGTTTGAGGAGACG 129846
||| ||||| ||||| | | | | | | ||| | ||| || ||
Sbjct 2287267 AAAGTCAAAGGGGTTGGTGGCGCGGTAGACCTTTTCGTTTCCGAGGGCGACGAGCAGGCG 2287208
Query 129847 ATCCGAGACGTACTCAATGTACTCAGACATCTTCTCGGAGTTCATACCGATGAGGTTACA 129906
|| | |||| |||||||||||| ||| |||| |||||| |||| |||| |||
Sbjct 2287207 GTCGGCGACGAACTCAATGTACTGCTTCATGAGGTCGGCGTTCATGCCGAGGAGGCCACA 2287148
Query 129907 TGGGAGCGCGTCCAAGATGAACCCCTTCTCAATGTCCACAGCTTCCCGCACGATG-GCGT 129965
|| || || || | |||| ||||||||||| | ||||| || | ||| ||
Sbjct 2287147 GGGCAGGGCCTCGGTCAGGAACTCCTTCTCAATGACGACAGCATCGGTGATGATCTGCTC 2287088
Query 129966 GAATGGTCTCCGTGCCAGGTCTATTGCGCAAAGTCTTGAAGAGTTCCACGGCAAACTCCT 130025
|| | | || | ||| || | ||| | | ||| || |||||| ||
Sbjct 2287087 GACTAG-CTGCTTGCTGGGGCGGTTGTTGAGGTGCGAGAACAGCAGACAGGCAAAGTCGG 2287029
Query 130026 GGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGAC 130085
||| || ||||||||||| ||||| || || || |||||| ||| || |||||||| |
Sbjct 2287028 TGTGCAGGCCCTCGTCACGCGAGATCAGCTCGTTGGAGAAGGTCAGGCCAGGCATGAGGC 2286969
Query 130086 CCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACAC 130145
| ||||| || |||||| || | || | ||| ||||||||||| ||||| ||
Sbjct 2286968 CGCGCTTGCGCAGCCAGAAGATGGAGGCGAAAGCGCCCGAGAAGAAGATGCCCTCGACGG 2286909
Query 130146 ACGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGGGACTTTGT-ATCAAACCACTTCATC 130204
|| || || | || |||| ||||||| || | |||| | |||||| |
Sbjct 2286908 CGGCAAAGGCGACCAGGCGCTGGGCAAAGG-TCGACTCCTTGTCGGTGATCCACTTGAGG 2286850
Query 130205 GCCCACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGCTTCAAAGAGTTCCTTC 130264
||||| | ||||| ||| ||||||| ||| | ||| || | ||||| | |
Sbjct 2286849 GCCCAGTCGGCCTTGCGGCGGATGCACGGGATGGTATCGATGGCGTTGAAGAGGTAGGTG 2286790
Query 130265 TTTTCTGATGGATCTTTGATGTACTTATCTATGAGTTTTGAATATGTTTCGCCATGGACC 130324
| || || || |||||||| | || || || || || || ||| ||||
Sbjct 2286789 CGCTGCGAGGGCTCCTTGATGTAAGTGTCGATCAGCAGCGAGTACGTCTCGGAGTGGATG 2286730
Query 130325 AT-TTCATTATGGCACTGATACGCGTAGAAAGAGCGCGCTTCGCTTATCTGTACCTCATC 130383
| | ||| || | ||| | ||||||| |||| || ||| ||||| ||||| |
Sbjct 2286729 TTCTCCATCAT-GATCTGGAAGCCGTAGAAGCAGCGGGCCTCGGGGATCTGGACCTCGCC 2286671
Query 130384 TGCAAAATTGTTATTGATATTCTCAAAAACAATTCCATCGGACCCAGCAAAAAACGCCAG 130443
| ||| | || ||||| || || || ||||| | || || || || ||
Sbjct 2286670 GGAGAAACGCTCGACGAGGTTCTCGTTGACGATGCCGTCGGATGCGGCGAAGAAGGCGAG 2286611
Query 130444 GATATACTTTATGAATTTCTGTTCATTCTCGTTCA---GGGTCTTCCAGTCGTCAAGATC 130500
||| | | ||||| | |||||||| || ||||| || | |||||||||| ||| ||
Sbjct 2286610 GATGTGCGAGATGAAGTACTGTTCATCCTTGTTCAGGCGGTTGTTCCAGTCGTGAAGGTC 2286551
Query 130501 CTTCGAGAGATCTACCTCCTCCGCAGTCCA 130530
||| || || || | ||||| ||||||||
Sbjct 2286550 CTTGGACAGGTCAATTTCCTCGGCAGTCCA 2286521
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 618435107234720
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