Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chalaropsis_20thielavioides_20[genbank_20GCA_5F001599435.1_202016- 03-01] 12 sequences; 23,333,049 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq8 179 5e-40 seq4 159 4e-34 >seq8 Length=1110981 Score = 179 bits (198), Expect = 5e-40 Identities = 853/1334 (64%), Gaps = 31/1334 (2%) Strand=Plus/Plus Query 118143 TTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCAGATAGATATTGGTCGTGTATGGC 118202 |||||||| ||||| || || || || | | | || || |||| ||||| ||| Sbjct 323813 TTGACAACCTGGAACTCGCCGGCAAGAACACGGCGCTGGTAAATGTTGGAAGTGTAGGGC 323872 Query 118203 TCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAGGCTGTGGGCATGGGTGCCATG 118262 ||||||||||| |||||||||| ||| || | || ||| |||||||||||||| | Sbjct 323873 TCAAAGCACTCGTTGTTACCCAGGATCTGCGACGTACTGGCAGTGGGCATGGGTGCAACC 323932 Query 118263 AGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTCCTTGAGAGCGTCCCAGTCGTAG 118322 || || ||| |||| ||| | | | |||| |||||||| | |||||| | Sbjct 323933 AGGAGAGAGTTGCGGACACCGTGCTGCTTAATCTTCTCCTTGAGGGAAGTCCAGTCCCAA 323992 Query 118323 TTGAGCTTTGT-CTCCCCCTGCCACATATCAAACTGGAGGATACCTTGGGACGCTGGCGA 118381 || | || | | | | |||||| ||||| || ||||| || || || | ||||| Sbjct 323993 A-GATCGCTGGGCGTCACATCCCACATGTCAAATTGCAGGATGCCCTGCGAGACCGGCGA 324051 Query 118382 TCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCCAATTCG---GAGCTCGCCTCGAG 118438 |||||| | || |||| ||||||| || || | || ||| || | || Sbjct 324052 GCCCTCATAAGTAGAGTATGTGCCCTCAGTCTGGGCAATCTCCATTGAGGCCGTC---AG 324108 Query 118439 GGCTGCGTGATACATTGTTTCAAAAATGCGAGCATTCAT-TGCCTTGGCCTCGTCGGAAT 118497 || ||||| || || || |||||||| | |||| || | | ||||| || | Sbjct 324109 CGCAGCGTGGTAGATGGTCTCAAAAATCTGCTTGTTCAGCTGACGAG-CCTCGGGAGACT 324167 Query 118498 CAAACGCGAGTCGGCACAAA-ATAAATACATCCGCGAGACCTTGGACACCGAGGCCAATT 118556 |||| | | || || | | || |||| || ||||| |||||||||| ||||| Sbjct 324168 CAAAAGGCATGCG-CAGAGCCAGGAAGGCATCAGCCAGACCCTGGACACCGACACCAATC 324226 Query 118557 GGGCGATGTCTCATATTAGACTTCCGAGCGGTCTCC---ACGGGATAAAAATTCCTATCG 118613 ||||| || | ||| || || || |||| || || || ||| ||| Sbjct 324227 GGGCGGTGGCGCATGTTGCTGTTGTAGGC---CTCCGTGACAGGGTAGTGGTTCACATCA 324283 Query 118614 ATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGCTTTTCGTAATCA 118673 || | | || || || | || |||| ||||| ||||||||||||| | | || Sbjct 324284 ATGATGCGGTTCAGGTTGCGGACAACGACCTGTGTGACTTCATGAAGCTTTCCAAAGTCG 324343 Query 118674 AAACTGCGAGTCTCTTCATTGACATACTTAGGAAGGGCGATTGACGCCAGATTACACACA 118733 | || | | | | ||| | || ||||| | || ||||| || |||||| Sbjct 324344 TACTCGCCCTTGTTGTAGTCAACAAATGAGGGCAGGGCAAGAGAGGCCAGGTTGCACACA 324403 Query 118734 GAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTGCACAAGTTTGAACTCTTAATG 118793 | |||||| || |||||| ||||| || ||||||| ||| || || |||| Sbjct 324404 GCAACCTCATCGGGGGCACAGTACTCGATAATCTCAGTGCACAGGTTGGAGCTGCGAATG 324463 Query 118794 GTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAAAGCATGTATGGC 118853 || |||| |||||| || || ||| ||| || |||||||||||||| | || Sbjct 324464 GTACCCAGGTTCTTCTGGTTGCTCTTGCGGTTGCAGCTGTCCTTGTAAAGCATAAAGGGA 324523 Query 118854 GTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCAGA-CATCGGCAGCTGGCACAGT 118912 | || ||||| || |||| || ||||| || | ||| | | || | |||| | | Sbjct 324524 TTGCCAGTCTCGGTCTGGGCCTCCAGAATGGCGTACCACAGCTTCTG-AGCTTTGATAAC 324582 Query 118913 GGCGTTGGCTCGCCCCTCTTCCTCGTACTTTGTGTAGAGGGCTTCAAACTCTTCACCCAC 118972 | | | || || || | ||||||||| ||| || ||||||||||| || || Sbjct 324583 CATGCGGCCACGGCCTTCCTTTTCGTACTTTTCGTACAGAGCTTCAAACTCATCGCCGTA 324642 Query 118973 GGCCTCTGAGAGCCCTGGTGCCTTATCTGGGCAGAAGAGAGACCATTGACCACCCTCCTC 119032 | || | || || || || | ||||| | |||| ||| | | || ||| Sbjct 324643 GCAGTCAGCCAGGCCGGGGCACTCGTTGGGGCACATCAGAGTCCAGTCCTCGTTCTTCTC 324702 Query 119033 AACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCGCCGAGAAGAGATCCCGACAGCGAGC 119092 ||| ||||||||||| ||||| |||||| || ||| ||| | || || ||| | Sbjct 324703 AACACGCTTCATGAACAGGTCGCAGATCCACAGAGCCAGGAACAAGTCGCGGGCACGAAC 324762 Query 119093 TTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGG 119152 ||||| | || || || |||| || | || || | | || |||||||| || Sbjct 324763 CTCTTCCTTTCCATGGTTCTTGCGCAGGTCAAGGAACTCAAACACGTCGGCGTGCCAGGG 324822 Query 119153 TTCCAGGTACACCGCGATTG-ACC---CCTTACGACGACCAGCCTGGTTTACATACCTCG 119208 ||||||||| | || | | ||| || | | ||| |||||| ||||| | | Sbjct 324823 TTCCAGGTATATAGCAAAGGCACCGGGCCGCTTGTTG-CCACCCTGGTCAACATAGCGGG 324881 Query 119209 CAGTGGCGTTAAATACACGAAGCATTGGAATGATACCATCGGATTGGCCATTTGTCCCCC 119268 | ||| ||| || ||||| | ||| |||| ||||| | ||| || || || || Sbjct 324882 CCGTGTTGTTGAAGACACGCAACATAGGAACAATACCGTTGGAGGTACCGTTGGTGCCGG 324941 Query 119269 GAA--TACGAGACTTATTGGCTCTGACATCGTGGATGTGCATACCAATACCCCCTGCCCA 119326 || || ||| | | |||| | | ||||| || | ||| || || || ||| Sbjct 324942 CAATGTAGGAGCC--AGTGGCACGAATGCGGTGGACGTTGAGACCGATGCCGCCAGCCAT 324999 Query 119327 CTTTGAGATTTGCGCGCACTCCGTGAGACTGCCGTAGATCCCATCGATCGAGTCACCCTT 119386 ||| ||||| || || | |||| | |||| || || || || ||| |||| Sbjct 325000 CTTGGAGATCATAGCACAAGTCTTGAGGGTATCGTAAATGCCCTCAATGCTGTCGTCCTT 325059 Query 119387 ATTTGCGATGAGGAAGCAGCTCGACATTTGAGGCCTG-GGTGTACCAGCGTTGAAGAGAG 119445 | ||| || ||||| |||| || |||||| || ||||| ||||||||||||| Sbjct 325060 CATGTCGACTAGAAAGCATGAAGACAGCTG-GGCCTGAGGGGTACCGGCGTTGAAGAGAG 325118 Query 119446 TTGGTGTCGCGTGG 119459 | || | ||| ||| Sbjct 325119 TGGGAGACGCATGG 325132 >seq4 Length=2525909 Score = 159 bits (176), Expect = 4e-34 Identities = 528/810 (65%), Gaps = 11/810 (1%) Strand=Plus/Minus Query 129728 TAGTCCCCAACCCGCTTCTCGAAGAAGTTTGTCTTCCCGTCCAAGCT-GATATTCTCCAT 129786 ||||| || || ||||||||||||||||| ||||| ||| || ||| ||| |||||||| Sbjct 2287326 TAGTCGCCCACGCGCTTCTCGAAGAAGTTGGTCTTGCCG-CCGAGCGAGATGTTCTCCAT 2287268 Query 129787 AAAATCAAATGGGTTCTTTGAGTTCCAAATTGCTGGCACTCCAATCTGTTTGAGGAGACG 129846 ||| ||||| ||||| | | | | | | ||| | ||| || || Sbjct 2287267 AAAGTCAAAGGGGTTGGTGGCGCGGTAGACCTTTTCGTTTCCGAGGGCGACGAGCAGGCG 2287208 Query 129847 ATCCGAGACGTACTCAATGTACTCAGACATCTTCTCGGAGTTCATACCGATGAGGTTACA 129906 || | |||| |||||||||||| ||| |||| |||||| |||| |||| ||| Sbjct 2287207 GTCGGCGACGAACTCAATGTACTGCTTCATGAGGTCGGCGTTCATGCCGAGGAGGCCACA 2287148 Query 129907 TGGGAGCGCGTCCAAGATGAACCCCTTCTCAATGTCCACAGCTTCCCGCACGATG-GCGT 129965 || || || || | |||| ||||||||||| | ||||| || | ||| || Sbjct 2287147 GGGCAGGGCCTCGGTCAGGAACTCCTTCTCAATGACGACAGCATCGGTGATGATCTGCTC 2287088 Query 129966 GAATGGTCTCCGTGCCAGGTCTATTGCGCAAAGTCTTGAAGAGTTCCACGGCAAACTCCT 130025 || | | || | ||| || | ||| | | ||| || |||||| || Sbjct 2287087 GACTAG-CTGCTTGCTGGGGCGGTTGTTGAGGTGCGAGAACAGCAGACAGGCAAAGTCGG 2287029 Query 130026 GGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGAC 130085 ||| || ||||||||||| ||||| || || || |||||| ||| || |||||||| | Sbjct 2287028 TGTGCAGGCCCTCGTCACGCGAGATCAGCTCGTTGGAGAAGGTCAGGCCAGGCATGAGGC 2286969 Query 130086 CCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACAC 130145 | ||||| || |||||| || | || | ||| ||||||||||| ||||| || Sbjct 2286968 CGCGCTTGCGCAGCCAGAAGATGGAGGCGAAAGCGCCCGAGAAGAAGATGCCCTCGACGG 2286909 Query 130146 ACGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGGGACTTTGT-ATCAAACCACTTCATC 130204 || || || | || |||| ||||||| || | |||| | |||||| | Sbjct 2286908 CGGCAAAGGCGACCAGGCGCTGGGCAAAGG-TCGACTCCTTGTCGGTGATCCACTTGAGG 2286850 Query 130205 GCCCACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGCTTCAAAGAGTTCCTTC 130264 ||||| | ||||| ||| ||||||| ||| | ||| || | ||||| | | Sbjct 2286849 GCCCAGTCGGCCTTGCGGCGGATGCACGGGATGGTATCGATGGCGTTGAAGAGGTAGGTG 2286790 Query 130265 TTTTCTGATGGATCTTTGATGTACTTATCTATGAGTTTTGAATATGTTTCGCCATGGACC 130324 | || || || |||||||| | || || || || || || ||| |||| Sbjct 2286789 CGCTGCGAGGGCTCCTTGATGTAAGTGTCGATCAGCAGCGAGTACGTCTCGGAGTGGATG 2286730 Query 130325 AT-TTCATTATGGCACTGATACGCGTAGAAAGAGCGCGCTTCGCTTATCTGTACCTCATC 130383 | | ||| || | ||| | ||||||| |||| || ||| ||||| ||||| | Sbjct 2286729 TTCTCCATCAT-GATCTGGAAGCCGTAGAAGCAGCGGGCCTCGGGGATCTGGACCTCGCC 2286671 Query 130384 TGCAAAATTGTTATTGATATTCTCAAAAACAATTCCATCGGACCCAGCAAAAAACGCCAG 130443 | ||| | || ||||| || || || ||||| | || || || || || Sbjct 2286670 GGAGAAACGCTCGACGAGGTTCTCGTTGACGATGCCGTCGGATGCGGCGAAGAAGGCGAG 2286611 Query 130444 GATATACTTTATGAATTTCTGTTCATTCTCGTTCA---GGGTCTTCCAGTCGTCAAGATC 130500 ||| | | ||||| | |||||||| || ||||| || | |||||||||| ||| || Sbjct 2286610 GATGTGCGAGATGAAGTACTGTTCATCCTTGTTCAGGCGGTTGTTCCAGTCGTGAAGGTC 2286551 Query 130501 CTTCGAGAGATCTACCTCCTCCGCAGTCCA 130530 ||| || || || | ||||| |||||||| Sbjct 2286550 CTTGGACAGGTCAATTTCCTCGGCAGTCCA 2286521 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618435107234720