Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chalaropsis_20thielavioides_20[genbank_20GCA_5F001599435.1_202016-
03-01] 12 sequences; 23,333,049 total letters
Query= NC_028112.1
Length=178262
Score E
Sequences producing significant alignments: (Bits) Value
seq8 347 1e-90
seq3 176 5e-39
seq10 145 9e-30
seq4 113 5e-20
>seq8
Length=1110981
Score = 347 bits (384), Expect = 1e-90
Identities = 949/1435 (66%), Gaps = 70/1435 (5%)
Strand=Plus/Plus
Query 80356 AACTCTCCCGCGAGGGTGCGACGCAGATACAGGTTTGTAGTGTAAGGCTCAAATGCCTCG 80415
||||| || || || || ||| | || | ||| | |||||| |||||||| ||||
Sbjct 323825 AACTCGCCGGCAAGAACACGGCGCTGGTAAATGTTGGAAGTGTAGGGCTCAAAGCACTCG 323884
Query 80416 TTGTTTCCGAGGATCTGAGCCGTGCTCGCCGTCGGCATCGGGCCGACCAACAGTGAATTC 80475
||||| || |||||||| | ||| || || || ||||| || | |||| || || ||
Sbjct 323885 TTGTTACCCAGGATCTGCGACGTACTGGCAGTGGGCATGGGTGCAACCAGGAGAGAGTTG 323944
Query 80476 CGCAGGCCGTGCTTCTTGATATCCTCGCGCAAATCTGACCAAAAATCAACCCCAA----C 80531
|| | ||||||| ||| || | ||| ||| || || ||||| |
Sbjct 323945 CGGACACCGTGCTGCTTAATCTTCTCCT-------TGAGGGAAGTCCAGTCCCAAAGATC 323997
Query 80532 GCTGTG------ACCCCACATGTCGTGCTGCAAGATGCCCTCCGACGCCGGAGACCCCGC 80585
|||| | | |||||||||| |||| |||||||| ||| |||| || ||| |
Sbjct 323998 GCTGGGCGTCACATCCCACATGTCAAATTGCAGGATGCCCTGCGAGACCGGCGAGCCCTC 324057
Query 80586 GAACGTCTCGTACGGGCCCTCCGTCTTGGCCAGCTCACACGACTCCATAAGGGCCGCGTG 80645
| || ||| | |||||| |||| ||| | ||| || || | || || |||||
Sbjct 324058 ATAAGTAGAGTATGTGCCCTCAGTCTGGGCAATCTCCATTGAGGCCGTCAGCGCAGCGTG 324117
Query 80646 ATAAATGCACTCAAAGACGCCCTTGTTCACACCGCGCGCCTGTGGGTCGTCGAACGACAA 80705
|| ||| |||||| | |||||||| || |||| || || || | ||
Sbjct 324118 GTAGATGGTCTCAAAAATCTGCTTGTTCAGCTGACGAGCCTCGGGAGACTCAAAAGGCAT 324177
Query 80706 GCCCATCATCATGAACACGTCAGCCAGGCCCTGAACGCCGATGGCGATCGGGCGGTGGCG 80765
|| || || ||| | |||||||| ||||| || |||| | ||||||||||||||
Sbjct 324178 GCGCAGAGCCAGGAAGGCATCAGCCAGACCCTGGACACCGACACCAATCGGGCGGTGGCG 324237
Query 80766 CTTGTT-CGATCGCTCGGCCTCCGGAATTGGGTAAAAGTTATTATCGATGACGCGGTTCA 80824
| |||| | | | | |||||||| | ||||| ||| ||| |||| ||||||||
Sbjct 324238 CATGTTGCTGTTG-TAGGCCTCCGTGACAGGGTAGTGGTTCACATCAATGATGCGGTTCA 324296
Query 80825 GGTTGCGTGTAACAACCCGTGTAACATCATGAAGTTTCTGAAAGTCGAATTGGTTCCCCT 80884
||||||| ||| ||| |||| || |||||||| || ||||||| | | | ||| |
Sbjct 324297 GGTTGCGGACAACGACCTGTGTGACTTCATGAAGCTTTCCAAAGTCGTACTCG--CCCTT 324354
Query 80885 -------TC-ACAAATGCCGGAAGGCTCAGGGACGCCAGATTGCACACGGCCACCTCTTC 80936
|| ||||||| || ||| || || ||||| |||||||| || ||||| ||
Sbjct 324355 GTTGTAGTCAACAAATGAGGGCAGGGCAAGAGAGGCCAGGTTGCACACAGCAACCTCATC 324414
Query 80937 ---AGCATCTGTAAACTCGACGATTTCCGTGCACAAATTAGAAGACTTAATTGTACCCAG 80993
||| | || |||||| || || ||||||| || || ||| ||||||||
Sbjct 324415 GGGGGCA-CAGT--ACTCGATAATCTCAGTGCACAGGTTGGAGCTGCGAATGGTACCCAG 324471
Query 80994 GTTTTTCTGGTTTGACTTGGCGTTGCAAGCGTCCTTGTAGCACATGTACGGGGTACCGGT 81053
||| |||||||| |||| |||||| ||||||||| ||| | || | || ||
Sbjct 324472 GTTCTTCTGGTTGCTCTTGCGGTTGCAGCTGTCCTTGTAAAGCATAAAGGGATTGCCAGT 324531
Query 81054 CTCGACCTGTGACTTGAGGATGGCGTCCCAAATCTCGCGCGCCTTGACCACCTTGCGGAA 81113
|||| ||| | || || ||||||| ||| | || | || |||| ||| |||||
Sbjct 324532 CTCGGTCTGGGCCTCCAGAATGGCGTACCACAGCTTCTGAGCTTTGATAACCATGCGGCC 324591
Query 81114 TTTGCCTTCGGCCACATACTTGGCGTA---AGCTTCGTCGAACTTGGCACCGT-GAAGTT 81169
|||||| | ||||| |||| |||| || |||| | |||| | || |
Sbjct 324592 ACGGCCTTCCTTTTCGTACTTTTCGTACAGAGCT---TCAAACTCATCGCCGTAGCAG-T 324647
Query 81170 CAGTGAGGTCTGGGCACTCGTTAGGGCACATCAGGTGCCAGTCGGTGTCGTTCTCTACAG 81229
||| ||| | ||||||||||| ||||||||||| |||||| || ||||| |||
Sbjct 324648 CAGCCAGGCCGGGGCACTCGTTGGGGCACATCAGAGTCCAGTCCTCGTTCTTCTCAACAC 324707
Query 81230 CCTTCATGAAAGCGTCAGGGATCCAGAGGGCGGTGAACAGGTCGCGGCAGCGCGCCTCCT 81289
||||||||| ||| |||||| || || ||||| ||||||| || |||| |
Sbjct 324708 GCTTCATGAACAGGTCGCAGATCCACAGAGCCAGGAACAAGTCGCGGGCACGAACCTCTT 324767
Query 81290 CATCACCCTGGTTGAGGCGCAACTCGAGAAAGTCCATGATGTCCGCATGCCATGGCTCCA 81349
| | || ||||| ||||| || || || || | | ||| || ||||| || ||||
Sbjct 324768 CCTTTCCATGGTTCTTGCGCAGGTCAAGGAACTCAAACACGTCGGCGTGCCAGGGTTCCA 324827
Query 81350 GATACACGGCGATCGACCCCTTGCGAC----GGCCACCCTGGTTGACGTAACGGGCAGTC 81405
| || | || | | | || || | ||||||||||| || || ||||| ||
Sbjct 324828 GGTATATAGC-AAAGGCACCGGGCCGCTTGTTGCCACCCTGGTCAACATAGCGGGCCGTG 324886
Query 81406 GCGTTAAATACACGCAACATAGGGATGATACCATCTGACTGACCGTTCGTACCCACGATA 81465
||| || |||||||||||||| | ||||| | || |||||| || || | ||
Sbjct 324887 TTGTTGAAGACACGCAACATAGGAACAATACCGTTGGAGGTACCGTTGGTGCCGGCAATG 324946
Query 81466 CGCGACCCCTTGGCGCGCA--CCTTGCTGATTGAAAGACCGATGCCACCTGACCACTTTG 81523
|| || |||| || | | || ||| ||||||||||| || | | ||| |
Sbjct 324947 TAGGAGCCAGTGGCACGAATGCGGTGGACGTTG--AGACCGATGCCGCCAGCCATCTTGG 325004
Query 81524 AAATCTGAGCACACCGGTTCATGGTCTCATAAATTCCCTCGATGCTATCTTTTTTCATGT 81583
| ||| |||||| || | ||| || ||||| ||||| ||||| || | |||||||
Sbjct 325005 AGATCATAGCACAAGTCTTGAGGGTATCGTAAATGCCCTCAATGCTGTCGTCCTTCATGT 325064
Query 81584 C-------AAGCAAGAA-ACAGCTTGACATCTGAGGGCTTTTTGAGCCGGCATTGAACAG 81635
| ||||| ||| |||||| | | ||||||| | ||||| ||||| ||
Sbjct 325065 CGACTAGAAAGCATGAAGACAGCTGGGC--CTGAGGG------GTACCGGCGTTGAAGAG 325116
Query 81636 TGTTGGGGTCGCGTGAATGAAATAAC-GGTTTGACATCAGGTCATAGGTTTCCTTGACGC 81694
|| || | ||| || | ||| ||| | | ||||| |||| || || || || |
Sbjct 325117 AGTGGGAGACGCATGGGT-AAAGAACTTGCTCGACATGAGGTTGTAAGTCTCGAGAACAC 325175
Query 81695 GTGGAATATCGTCACCGTGAATACCGATAGCTACACGCATAAACATGTACTGGGG 81749
| | || |||||| ||| |||| || |||||||||| ||||| ||||||
Sbjct 325176 GCTCCACATTGTCACCCCAAATGCCGACGGCAACACGCATAATCATGTGCTGGGG 325230
Score = 150 bits (166), Expect = 2e-31
Identities = 164/218 (75%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 27415 TTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATT 27474
|| |||||||| || || || ||||| ||||| || ||||| ||||| || | ||
Sbjct 479100 TTCGTCAAGACCCTGACGGGTAAGACCATTACCCTAGAGGTCGAGTCTTCGGACACGATC 479041
Query 27475 GCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTA 27534
| || | ||| | || || |||||||||||||| ||||| || ||||||||||| ||
Sbjct 479040 GACAACGTCAAGTCCAAGATCCAGGACAAGGAGGGCATTCCCCCGGACCAGCAGCGCCTG 478981
Query 27535 ATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAG 27594
|| |||||||| ||||| || ||||||| || ||||| | ||||| || |||| |||
Sbjct 478980 ATCTTTGCTGGCAAGCAGCTTGAGGATGGCCGCACCCTGTCCGACTACAACATCCAGAAG 478921
Query 27595 GAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
|| ||||| || || || || ||||||| || |||||
Sbjct 478920 GAGTCCACCCTCCACCTGGTTCTGCGTCTGCGTGGTGG 478883
>seq3
Length=3916844
Score = 176 bits (194), Expect = 5e-39
Identities = 175/227 (77%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||||||||| |||||||| || || || ||||| || ||||| || || |||||
Sbjct 1905435 ATGCAAATCTTCGTCAAGACCCTGACTGGAAAGACCATCACTCTCGAAGTCGAGTCTTCC 1905376
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | || | || | ||| | || || |||||||||||||| || || || ||||||
Sbjct 1905375 GACACGATCGACAACGTCAAGTCCAAGATCCAGGACAAGGAGGGCATCCCCCCGGACCAG 1905316
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
||||| || || |||||||| ||||| || ||||||| |||||||| | ||||| ||
Sbjct 1905315 CAGCGCCTGATCTTTGCTGGAAAGCAGCTTGAGGATGGCCGTACCCTTTCCGACTACAAC 1905256
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
| |||||||| |||||||| ||||| ||| | ||||| ||||||||
Sbjct 1905255 ATTCAAAAGGAGTCCACTCTGCATCTCGTCCTCCGTCTGCGCGGTGG 1905209
Score = 168 bits (186), Expect = 8e-37
Identities = 168/218 (77%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 27418 GTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATTGCA 27477
|||||||| || || || ||||| || ||||| || || ||||| ||||| |||||
Sbjct 1905138 GTCAAGACCCTGACTGGAAAGACCATAACTCTCGAAGTCGAGTCCTCTGATACCATTGAC 1905079
Query 27478 AATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATT 27537
|| | ||| | || || || ||||||||||| || || || |||||||||||||| |||
Sbjct 1905078 AACGTCAAGTCCAAGATCCAAGACAAGGAGGGCATCCCCCCGGACCAGCAGCGTCTCATT 1905019
Query 27538 TTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAA 27597
|| ||||| ||||| || ||||||| ||| || || ||||||| || |||| ||||||
Sbjct 1905018 TTCGCTGGCAAGCAGCTTGAGGATGGTCGCACTCTCTCAGACTACAACATCCAGAAGGAA 1904959
Query 27598 TCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGACA 27635
|| ||||| ||||| || ||||||| || || || ||
Sbjct 1904958 TCTACTCTGCATCTGGTTCTGCGTCTGCGTGGAGGCCA 1904921
Score = 150 bits (166), Expect = 2e-31
Identities = 155/203 (76%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 27430 ACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATTGCAAATTTGAAGGCT 27489
||||||||||| || || |||||||| || | || | || | ||| | ||| |
Sbjct 1905639 ACCGGCAAGACCATCACCCTTGAGGTGGAAACTTCCGACACGATCGACAATGTCAAGTCC 1905580
Query 27490 AAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAG 27549
|| || |||||||||||||| || ||||| ||||||||||| || || |||||||| |||
Sbjct 1905579 AAGATCCAGGACAAGGAGGGCATCCCTCCGGACCAGCAGCGCCTGATCTTTGCTGGAAAG 1905520
Query 27550 CAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCAT 27609
|| || ||||||| |||||||| | ||||| || |||| || || |||||||| |||
Sbjct 1905519 CAGCTTGAGGATGGCCGTACCCTTTCCGACTACAACATCCAGAAAGAGTCCACTCTGCAT 1905460
Query 27610 CTAGTCTTGCGTCTTCGCGGTGG 27632
|| ||| | ||||| || |||||
Sbjct 1905459 CTCGTCCTCCGTCTCCGTGGTGG 1905437
Score = 98.7 bits (108), Expect = 1e-15
Identities = 181/263 (69%), Gaps = 2/263 (1%)
Strand=Plus/Minus
Query 32002 CAGCGCAAGGTGATATACGCCTGCCTCAAGAAGAACCTG-TCGAGTGACATGAAGGTGGC 32060
|| |||||||| || ||||||||| ||| || ||| || || || |||||||||||||
Sbjct 3035670 CAACGCAAGGTCATTTACGCCTGCTTCAGCAAAAACGTGGTCCAG-GACATGAAGGTGGT 3035612
Query 32061 GCAGCTGTCGGGCTACGTGGCAGAGCAAACGGCCTATCACCACGGCGAGGCGTCGCTCCA 32120
|| || | || ||||| | | || || |||| || ||||| |||| ||| || ||
Sbjct 3035611 TGAGTTGGCTGGTTACGTTTCTGGACATACCTCCTACCAACACGGTGAGGTGTCTCTGCA 3035552
Query 32121 GGGCACCATTGTCAACCTTGCTCAGAACTTTGTCGGTGCAAATAACCTGAACTTACTCGA 32180
| || ||| | ||| ||||||| |||||| ||| | ||||| | |||| | ||
Sbjct 3035551 GCAAACAATTATTGGCCTGGCTCAGACCTTTGTGGGTTCTAATAATGTCAACTGCTTGGA 3035492
Query 32181 GCCATCTGGACAGTTTGGGACCCGGCTCGCCGGTGGCAAGGATGCTGCGAGCTCCCGTTA 32240
|| ||| | ||||| | || || | |||||| |||||||| | | |||||
Sbjct 3035491 ACCCAGTGGTAACTTTGGTTCGCGTCTTTCTGGTGGCTCTGATGCTGCTTCCGCTCGTTA 3035432
Query 32241 CATCTTCACCCGTCTCGCACCTT 32263
||| ||||| || | ||||
Sbjct 3035431 TATCCATACCCGCCTGTCCCCTT 3035409
>seq10
Length=988720
Score = 145 bits (160), Expect = 9e-30
Identities = 146/190 (77%), Gaps = 0/190 (0%)
Strand=Plus/Minus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| || || |||||||| ||||| || ||||| ||||| || |||||||||||
Sbjct 887336 ATGCAGATTTTCGTCAAGACCCTTACGGGTAAGACGATTACCCTCGAGGTTGAGTCCTCG 887277
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | || | ||| | ||| | || ||||||||||||||||| ||||| || ||||||
Sbjct 887276 GACACTATCGACAATGTCAAGTCCAAGATTCAGGACAAGGAGGGCATTCCCCCGGACCAG 887217
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
||||| || || || ||||||||||| || ||||| | || ||||| | ||||| ||
Sbjct 887216 CAGCGCCTGATCTTCGCTGGTAAGCAGCTGGAGGACGGCCGCACCCTGTCTGACTACAAC 887157
Query 27586 GTCCAAAAGG 27595
|||| ||||
Sbjct 887156 ATCCAGAAGG 887147
>seq4
Length=2525909
Score = 113 bits (124), Expect = 5e-20
Identities = 260/384 (68%), Gaps = 11/384 (3%)
Strand=Plus/Plus
Query 64666 AAGGCTGAATGGGCCATCCGGTGGATGAAT--CGTGG-GTCGTCGTTTGGTCAGCGTCTC 64722
||||| || |||||| || |||||| | | || |||| | |||| ||||| ||
Sbjct 2286836 AAGGCCGACTGGGCCCTCAAGTGGATCACCGACAAGGAGTCGACCTTTGCCCAGCGCCTG 2286895
Query 64723 GCAGCTTTTGCCTGTGTGGAAGGAATTTTCTTTTCTGGGTCATTCTGTTCTATTTTCTGG 64782
| || |||||| || || || || ||||| || || | ||| || || ||||||
Sbjct 2286896 GTCGCCTTTGCCGCCGTCGAGGGCATCTTCTTCTCGGGCGCTTTCGCCTCCATCTTCTGG 2286955
Query 64783 CTAAAAAAGCGGGGCCTGATGCCAGGTCTGTCGTTTTCGAACGAGCTGATCTCTCGGGAC 64842
|| ||||| ||||| ||||| || ||| | || || |||||||||||||| || |||
Sbjct 2286956 CTGCGCAAGCGCGGCCTCATGCCTGGCCTGACCTTCTCCAACGAGCTGATCTCGCGTGAC 2287015
Query 64843 GAGGGGCTCCACCAAGAATTTGCGGTTACCCTGTTCAGCCACCTCAAGGACAAACCATCA 64902
||||| || ||| || ||||| | |||||| |||||||| || || ||
Sbjct 2287016 GAGGGCCTGCACACCGACTTTGCCTGTCTGCTGTTCTCGCACCTCAACAACCGCCC--CA 2287073
Query 64903 -CATGGGACTATAATTGA-TATAGTAAAATCG--GCTGTAGAAATTGAAAAGGAATTCAT 64958
|| | | || | || | | | | || ||||| | ||||| ||||| ||| |
Sbjct 2287074 GCAAGCAGC--TAGTCGAGCAGATCATCACCGATGCTGTCGTCATTGAGAAGGAGTTCCT 2287131
Query 64959 TACTGCCGCGCTTCCGTGTCGTCTCATCGGCATGGATGCCGATAAGATGAAACAGTATAT 65018
|| | || || || ||| | ||| |||||||| | ||||| ||||| ||||| ||
Sbjct 2287132 GACCGAGGCCCTGCCCTGTGGCCTCCTCGGCATGAACGCCGACCTCATGAAGCAGTACAT 2287191
Query 65019 CGAATTTGTAGCAGATCGCCTGCT 65042
|| || || || || ||||||||
Sbjct 2287192 TGAGTTCGTCGCCGACCGCCTGCT 2287215
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 570310314453440
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