Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chalaropsis_20thielavioides_20[genbank_20GCA_5F001599435.1_202016-
03-01] 12 sequences; 23,333,049 total letters
Query= NC_028491.1
Length=98392
Score E
Sequences producing significant alignments: (Bits) Value
seq3 93.3 3e-14
seq8 84.2 1e-11
>seq3
Length=3916844
Score = 93.3 bits (102), Expect = 3e-14
Identities = 101/134 (75%), Gaps = 0/134 (0%)
Strand=Plus/Plus
Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548
||||| | || | ||| |||||| ||||||||||||||| || || ||||| || ||
Sbjct 1905218 AGACGGAGGACGAGATGCAGAGTGGACTCCTTTTGAATGTTGTAGTCGGAAAGGGTACGG 1905277
Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608
| || ||||| || || || ||||| || | ||||| |||||||| || | ||||||
Sbjct 1905278 CCATCCTCAAGCTGCTTTCCAGCAAAGATCAGGCGCTGCTGGTCCGGGGGGATGCCCTCC 1905337
Query 34609 TTGTCTGTGATCTT 34622
||||| ||||||
Sbjct 1905338 TTGTCCTGGATCTT 1905351
Score = 89.7 bits (98), Expect = 3e-13
Identities = 100/134 (75%), Gaps = 0/134 (0%)
Strand=Plus/Plus
Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548
||||||| |||| ||| ||||| ||||| || ||||| || ||||| || || ||
Sbjct 1904933 AGACGCAGAACCAGATGCAGAGTAGATTCCTTCTGGATGTTGTAGTCTGAGAGAGTGCGA 1904992
Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608
| || ||||| || || || || || || | |||||| |||||||| || | ||||||
Sbjct 1904993 CCATCCTCAAGCTGCTTGCCAGCGAAAATGAGACGCTGCTGGTCCGGGGGGATGCCCTCC 1905052
Query 34609 TTGTCTGTGATCTT 34622
|||||| ||||||
Sbjct 1905053 TTGTCTTGGATCTT 1905066
>seq8
Length=1110981
Score = 84.2 bits (92), Expect = 1e-11
Identities = 99/134 (74%), Gaps = 0/134 (0%)
Strand=Plus/Plus
Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548
||||||| |||| ||||| ||| |||||| || ||||| || || || || || ||
Sbjct 478892 AGACGCAGAACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGG 478951
Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608
| || ||||| || || || ||||| || | ||||| |||||||| || | ||||||
Sbjct 478952 CCATCCTCAAGCTGCTTGCCAGCAAAGATCAGGCGCTGCTGGTCCGGGGGAATGCCCTCC 479011
Query 34609 TTGTCTGTGATCTT 34622
||||| ||||||
Sbjct 479012 TTGTCCTGGATCTT 479025
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 314729553970796
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |