Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chalaropsis_20thielavioides_20[genbank_20GCA_5F001599435.1_202016- 03-01] 12 sequences; 23,333,049 total letters Query= NC_030842.1 Length=115510 Score E Sequences producing significant alignments: (Bits) Value seq2 96.9 3e-15 >seq2 Length=3936381 Score = 96.9 bits (106), Expect = 3e-15 Identities = 286/444 (64%), Gaps = 49/444 (11%) Strand=Plus/Plus Query 27221 GAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGTACCCCGAGCCCCA 27280 |||| ||||||| || || |||||||| ||| ||||| |||||||| || || |||| Sbjct 849978 GAGCAATCATGTGTGTAAGCAGAGAGTACGAGGCAATGTTGAAGGGTACACCCAGGCCCA 850037 Query 27281 TGTCCCCCGACCTCTGGTAGAGCTGACA---CGA---------GAGCTCTCCATCGC--- 27325 |||| | ||||| ||||||| ||| || | | | ||| | | |||| Sbjct 850038 TGTCGCACGACCGTTGGTAGAACTGGCAGTGCAAATGGCCTTTGGGCTTTTCCTCGCCCT 850097 Query 27326 ---TT---------------ACGTAAAACTG-----ACATATGGCGTGGCACGGAGGAAG 27362 || ||||| ||||| ||||||| | |||| || || Sbjct 850098 CCTTTGCGCCGGGATATGAAACGTAGAACTGGGCAAACATATGAC-----ACGGCGGCAG 850152 Query 27363 AGCCATGAGGCCCAAGTCTTTGGGGTTCCAGGCGCACACGATGATGCGCCTGTCTTCTGG 27422 ||||| | |||| ||||||||| |||| || || ||||||| || | || Sbjct 850153 GGCCATCTTCTTTAGGTCTGCGGGGTTCCACGCGCTCATTATAATGCGCCGATCGTACGG 850212 Query 27423 GTTGTTCCTGA---TGAGGTCCACGGCGTTTTGCAGCTGATCCACCCCCATCCCCGAGTA 27479 ||| || ||| || || || || | ||||| || || || | |||| ||| Sbjct 850213 ATTGGTCTTGAGCTTGTGGATGACCTCGGCT---AGCTGGTCGACACCTTTGCCCGTGTA 850269 Query 27480 GTCTACCCTCATGTCCGTGTACTCTGCTCCGAAATGCCTCCATTGGAACCCGTACACCGG 27539 ||| | ||| |||||| || || ||||| | ||||||||| |||||||| || Sbjct 850270 GTCCGTTTTGGCGTCTACGTACTCGGCGCCAAAATGGCGCCATTGGAAGCCGTACACGGG 850329 Query 27540 TCCCAGGTCTCCCTCTTCCCTGTGCTCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACC 27599 ||||||||||| | || | ||| ||| |||| |||| | ||| || | || || Sbjct 850330 GCCCAGGTCTCCGACCTCGCGGTGGCCGAGGCCCACGCTGTCGAGAAACTCCCGCGAGCC 850389 Query 27600 GTTGGCGTCCCAGATCTTTACCCC 27623 |||| | ||||||||||| || || Sbjct 850390 GTTGCCATCCCAGATCTTGACGCC 850413 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 369507145959572