Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chalaropsis_20thielavioides_20[genbank_20GCA_5F001599435.1_202016-
03-01] 12 sequences; 23,333,049 total letters
Query= NC_031465.1
Length=360610
Score E
Sequences producing significant alignments: (Bits) Value
seq3 116 9e-21
seq8 87.8 4e-12
seq10 84.2 5e-11
>seq3
Length=3916844
Score = 116 bits (128), Expect = 9e-21
Identities = 156/215 (73%), Gaps = 4/215 (2%)
Strand=Plus/Plus
Query 151892 GAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATC 151951
|||||| ||||| ||||| ||||| ||||| |||||||| |||| | || | |||||
Sbjct 1905223 GAGGACGAGATGCAGAGTGGACTCCTTTTGAATGTTGTAGTCGGAAAGGGTACGGCCATC 1905282
Query 151952 TTCTAG--GCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTT 152009
|| || ||||| || || ||||| || | ||||||||||| | ||| || |||||
Sbjct 1905283 CTCAAGCTGCTTT--CCAGCAAAGATCAGGCGCTGCTGGTCCGGGGGGATGCCCTCCTTG 1905340
Query 152010 TCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATA 152069
|| || || || ||||| | || | |||| ||| ||| ||||| ||||| ||
Sbjct 1905341 TCCTGGATCTTGGACTTGACGTTGTCGATCGTGTCGGAAGACTCGACTTCGAGAGTGATG 1905400
Query 152070 GTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
|| || || || || ||||| ||||||| |||||
Sbjct 1905401 GTCTTTCCAGTCAGGGTCTTGACGAAGATTTGCAT 1905435
Score = 107 bits (118), Expect = 4e-18
Identities = 143/197 (73%), Gaps = 4/197 (2%)
Strand=Plus/Plus
Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945
||| | |||||| ||||| ||||| |||||||| ||||||||||| |||| | || |
Sbjct 1905445 GAGACGGAGGACGAGATGCAGAGTGGACTCTTTCTGGATGTTGTAGTCGGAAAGGGTACG 1905504
Query 151946 CCCATCTTCTAG--GCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCT 152003
||||| || || ||||| || || ||||| || | ||||||||||| | ||| ||
Sbjct 1905505 GCCATCCTCAAGCTGCTTT--CCAGCAAAGATCAGGCGCTGCTGGTCCGGAGGGATGCCC 1905562
Query 152004 TCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGA 152063
||||| || || || || |||||| | || | |||| ||| | || || |||||
Sbjct 1905563 TCCTTGTCCTGGATCTTGGACTTGACATTGTCGATCGTGTCGGAAGTTTCCACCTCAAGG 1905622
Query 152064 GTAATAGTTTTGCCCGT 152080
|| || || ||||| ||
Sbjct 1905623 GTGATGGTCTTGCCGGT 1905639
Score = 98.7 bits (108), Expect = 2e-15
Identities = 143/202 (71%), Gaps = 0/202 (0%)
Strand=Plus/Plus
Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952
|| || ||||| |||||||| || || ||||||||||| || | | ||| | |||||
Sbjct 1904939 AGAACCAGATGCAGAGTAGATTCCTTCTGGATGTTGTAGTCTGAGAGAGTGCGACCATCC 1904998
Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012
|| || || || ||||| || || | ||||||||||| | ||| || ||||| |||
Sbjct 1904999 TCAAGCTGCTTGCCAGCGAAAATGAGACGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCT 1905058
Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTT 152072
|| || || ||||| | || | | | || || ||| ||||| ||||| || ||
Sbjct 1905059 TGGATCTTGGACTTGACGTTGTCAATGGTATCAGAGGACTCGACTTCGAGAGTTATGGTC 1905118
Query 152073 TTGCCCGTGAGAGTCTTCACGA 152094
|| || || || ||||| ||||
Sbjct 1905119 TTTCCAGTCAGGGTCTTGACGA 1905140
>seq8
Length=1110981
Score = 87.8 bits (96), Expect = 4e-12
Identities = 141/203 (69%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952
|| || || || || || ||||| || ||||||||||| |||| | || | |||||
Sbjct 478898 AGAACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCATCC 478957
Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012
|| || || || || ||||| || | ||||||||||| | || || ||||| ||
Sbjct 478958 TCAAGCTGCTTGCCAGCAAAGATCAGGCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCC 479017
Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTT 152072
|| || || ||||| | || | |||| ||| ||| || || || ||||| ||
Sbjct 479018 TGGATCTTGGACTTGACGTTGTCGATCGTGTCCGAAGACTCGACCTCTAGGGTAATGGTC 479077
Query 152073 TTGCCCGTGAGAGTCTTCACGAA 152095
|| ||||| || ||||| |||||
Sbjct 479078 TTACCCGTCAGGGTCTTGACGAA 479100
>seq10
Length=988720
Score = 84.2 bits (92), Expect = 5e-11
Identities = 133/191 (70%), Gaps = 0/191 (0%)
Strand=Plus/Plus
Query 151917 TTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGGCTTTTCCCGGCGAAGATA 151976
|| ||||||||||| || | | || | || || || || || || ||||||||
Sbjct 887149 TTCTGGATGTTGTAGTCAGACAGGGTGCGGCCGTCCTCCAGCTGCTTACCAGCGAAGATC 887208
Query 151977 AGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTTTTGTTTGACAGTCTCT 152036
|| | ||||||||||| | || || ||||| || ||||| || |||||| | ||
Sbjct 887209 AGGCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGAATCTTGGACTTGACATTGTCG 887268
Query 152037 ACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGTGAGAGTCTTCACGAAG 152096
| |||| || ||| || || || ||||| || || ||||| || ||||| |||||
Sbjct 887269 ATAGTGTCCGAGGACTCAACCTCGAGGGTAATCGTCTTACCCGTAAGGGTCTTGACGAAA 887328
Query 152097 ACCTGCATTTT 152107
| |||||| ||
Sbjct 887329 ATCTGCATCTT 887339
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1153820622600052
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |