Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chrysoporthe_20austroafricana_20[genbank_20GCA_5F001051155.1_202015-
07-09] 6,415 sequences; 44,668,886 total letters
Query= NC_001611.1
Length=185578
Score E
Sequences producing significant alignments: (Bits) Value
seq638 140 4e-28
seq3478 113 5e-20
>seq638
Length=259535
Score = 140 bits (154), Expect = 4e-28
Identities = 381/578 (66%), Gaps = 14/578 (2%)
Strand=Plus/Minus
Query 53996 GGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATC 54055
|| ||||||| | ||| || |||| | || || || ||||| |||||||| || |||
Sbjct 6705 GGGCACATCAGAGTCCAGTCGCCGTTCTTCTCTACACGCTTCATGAAGAGATCCGGGATC 6646
Query 54056 CAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGA 54115
|| || || | || || || | | | || || ||||| ||||| ||
Sbjct 6645 CAGAGGGCAAGGAAGAGGTCACGAGCACGGACCTCTTCCTTTCCGTGGTTCTTCCGCAGG 6586
Query 54116 TCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGTCATAACTCCAGGC 54175
||||||||| | | | ||||| ||||| || |||| ||| |||| | | | || ||
Sbjct 6585 TCGAGGAACTCGAAGACATCAGCGTGCCATGGCTCCAGGTAGATGGCAAAAGCACCGGGG 6526
Query 54176 CGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGA 54235
|| || || || |||||||| | ||||| || ||||| || | || | |||||| ||
Sbjct 6525 CGCTTATTGCCACCCTGATCGACGTATCGGGCAGTGTTGTTGAAGACACGCAACATAGGG 6466
Query 54236 ATAATACCATTGGATGCACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTA 54295
|| || |||||||| | || ||||| || | ||| ||| || ||||||| ||
Sbjct 6465 ATGATGCCATTGGACGTGCCGTTGGTGCCAGCGATGTAGGAGCCGGTGGCACGGATGCGG 6406
Query 54296 CTAA--TTGATAGACCTATCCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACG 54353
| |||| |||| || || || ||||| || ||||| | || || || | |
Sbjct 6405 TGGACGTTGA--GACCAATGCCTCCAGCCATCTTGGAGATCATGGCACAGGTCTTCAGGG 6348
Query 54354 TATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTT 54413
|||||||||||||||| || || || ||| |||||| || || || || |||| |
Sbjct 6347 TATCATAGATGCCCTCAATGCTGTCCTCCTTCATGTCAACGAGGAAGCACGACGACAACT 6288
Query 54414 GGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAG 54473
| || || || ||||| || | || || || ||||| || || | || | |
Sbjct 6287 GCGCCTGAGGCGTGCCGGCATTGAACAGCGTTGGCGACGCGTGTGTGAAGAACTTGTTGG 6228
Query 54474 A-AAGTAGATTGTACGTCTCGATAGCTGAGTCTATAT----CCCATTGATGAATTCCTAC 54528
| | |||| ||||| ||||| | | | || || | ||| |||| || ||
Sbjct 6227 ACATGTAG-TTGTAGGTCTCAAGAACCCTCTCGATGTTGTCCCCCCAGATG----CCAAC 6173
Query 54529 TGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGA 54566
||||||||||| | ||||||||| || | || ||||
Sbjct 6172 AGCGACACGCATCAGCATGTGCTGTGGCCGCTCGACGA 6135
>seq3478
Length=17986
Score = 113 bits (124), Expect = 5e-20
Identities = 156/218 (72%), Gaps = 3/218 (1%)
Strand=Plus/Minus
Query 24126 AACATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAA 24185
|||| ||| || ||||| || ||| ||||||||||| | | || | |||||||||
Sbjct 8423 AACAGCAAGCAGGCGAAGTCAGTGTGCAGACCCTCGTCACGAGAGATGAGTTCGTTGGAG 8364
Query 24186 AACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCA 24245
|| || || || ||||| || |||||||| || ||||| || ||||| || || | |||
Sbjct 8363 AAGGTCAGGCCAGGCATCAGACCACGCTTCTTCAGCCAGAAGATGGAAGCGAAAGCGCCA 8304
Query 24246 GAAAAGAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTTTCTCCATA---ACCGGCG 24302
|||||||| ||||| || || ||||| |||| ||| | | | || | |
Sbjct 8303 CTGAAGAAAATACCTTCGACAGCAGCAAATGCAACAAGGCGCTGAGCGTAGGTAGACTCA 8244
Query 24303 CTGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTT 24340
| ||| || |||||| | ||||||| |||||||||||
Sbjct 8243 CGGTCCTGGATCCACCTCAGAGCCCAGTCGGCCTTCTT 8206
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 593673990949200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |