Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chrysoporthe_20austroafricana_20[genbank_20GCA_5F001051155.1_202015- 07-09] 6,415 sequences; 44,668,886 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq2112 168 8e-37 >seq2112 Length=5501 Score = 168 bits (186), Expect = 8e-37 Identities = 284/407 (70%), Gaps = 8/407 (2%) Strand=Plus/Minus Query 145866 CGCCACGTAGAACTG-GCACAGGAGGTGGCAGGGCGGCAGGGCCATGGCGGGCAGGTCCG 145924 || |||||||||||| ||| | | |||||| |||||||| |||||| ||||||| Sbjct 3944 CGACACGTAGAACTGCGCAAAC-ATGTGGCACGGCGGCAGCGCCATGATCTTCAGGTCCT 3886 Query 145925 CCGGGTTCCAGGCGGTGAGGACGAGCCTCCTGCTCTCG---GGGTTCCTCTTGATCTCCC 145981 |||||||| ||| | |||| || ||| || ||| |||||| || | || Sbjct 3885 TGGGGTTCCACGCGCTCAGGATGA---TCCGGCGGTCGTGCGGGTTCGTCCGCAGCTTGT 3829 Query 145982 CTATCAGGTCCCTGAGCTGGTCCACGCCCTGCCCCCGGTAATCTGTCTTGGAGTCCACGT 146041 | | ||| |||||||| |||||||| || ||| || | | ||| |||| Sbjct 3828 GCACGACCTCCGCCAGCTGGTCGACGCCCTGGCCGGCGTAGTCCGCGCGCGCGTCGACGT 3769 Query 146042 ACGCGGCCCCGAAGTGCCTCCACTGGAACCCGTAGACGGGCCCCAGGTCCCCGGGCTCCC 146101 || |||| |||||||||| ||||||||||||||| ||||| || ||||| || ||| | Sbjct 3768 ACTCGGCGCCGAAGTGCCGCCACTGGAACCCGTACACGGGGCCGAGGTCGCCCTCCTCGC 3709 Query 146102 TGTGCCCCAGCCCGGCCCGGGCGAGGAAGTCCCGGGACCCGTTGGCGTCCCAGATCTTGA 146161 |||| |||| || | | | | ||||| | || || |||||| ||||||||||||||| Sbjct 3708 GGTGCGCCAGGCCCACGCTGTCCAGGAACGCGCGCGAGCCGTTGCCGTCCCAGATCTTGA 3649 Query 146162 CGCCCCTCGCGGAGAGCTCATTGGAGTCCGTGGACCCCCTGATGAACCAGAGCAGCTCTT 146221 ||||| |||| |||| || ||| | ||| | ||||||||| ||||| Sbjct 3648 CGCCCTGCGCGCTGAGCGGCAGCGACGACGTCGCGCCCGACACGAACCAGAGGAGCTCGG 3589 Query 146222 CGAGGACCCCCCTCCAGAAGACCCTCTTGGTGGTCAGCAGGGGGAAC 146268 | || ||| ||| ||| || | |||||| || ||||| ||| || Sbjct 3588 CCAGCACCGCCCGGTGGAACACGCGCTTGGTCGTGAGCAGCGGGTAC 3542 Score = 152 bits (168), Expect = 6e-32 Identities = 236/324 (73%), Gaps = 21/324 (6%) Strand=Plus/Minus Query 145540 ACCGCCATCTCCATGGGGATGGCCGCGTGGGGGTGGTAGCCCTCCAGCGCAAAGTCCTCC 145599 |||| ||||| ||||| ||| | | ||| |||| || |||| || | ||||||||||| Sbjct 4357 ACCGACATCTTCATGGCGATCGTCTTGTGCGGGTCATACCCCTTCACCACAAAGTCCTCC 4298 Query 145600 ---GCCCTGAAGTC-AT-CTAT-GTCCTCCACCCGCCTCAGGATCCTGAGC-CTGGGAAA 145652 |||| ||| || ||| | || | |||||| ||||| ||| | ||||| Sbjct 4297 AGCGCCCACCCGTCGATACTACCGCCCGTCTCCCGCC---GGATCTCCAGCTCCGGGAAC 4241 Query 145653 GGGCCGGGGGCTCCTGGTC-AGCTGGAGCTTCAGGGGC---TCCACGTGGTTGAGGTAGA 145708 || | |||||| | || ||||| | || || || |||||||||| | ||||| Sbjct 4240 TCGC--GCGGCTCCCGCTCCAGCTG---CGTCCGGAGCGCGTCCACGTGGTCCACGTAGA 4186 Query 145709 CGTGCGCGTCCCCCAGGACGTGGATGAAG-TCCCCGGGCTCGAGGCCCGTGAGGTGGGCG 145767 |||||||||| |||| |||||| | | | | |||||| ||||| | | ||| ||| Sbjct 4185 CGTGCGCGTCGCCCATGACGTGCGTCAGGCTGCCCGGGA-CGAGGTCGCACACGTGCGCG 4127 Query 145768 ACCATGTAGGTCAGCAGGGAGTAGCTGGCTATGTTGAAGGGCACCCCCAGCCCCATGTCC 145827 ||||||| |||||||| | ||||||||| |||||||| ||||| || || |||||||| Sbjct 4126 ACCATGTGCGTCAGCAGCGCGTAGCTGGCGATGTTGAACGGCACGCCGAGGCCCATGTCG 4067 Query 145828 CCCGAGCGCTGGTACAGCTGGCAG 145851 | || |||||||||||||||||| Sbjct 4066 CAGGACCGCTGGTACAGCTGGCAG 4043 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 590029483216600