Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chrysoporthe_20austroafricana_20[genbank_20GCA_5F001051155.1_202015-
07-09] 6,415 sequences; 44,668,886 total letters
Query= NC_001650.2
Length=184439
Score E
Sequences producing significant alignments: (Bits) Value
seq2112 168 8e-37
>seq2112
Length=5501
Score = 168 bits (186), Expect = 8e-37
Identities = 284/407 (70%), Gaps = 8/407 (2%)
Strand=Plus/Minus
Query 145866 CGCCACGTAGAACTG-GCACAGGAGGTGGCAGGGCGGCAGGGCCATGGCGGGCAGGTCCG 145924
|| |||||||||||| ||| | | |||||| |||||||| |||||| |||||||
Sbjct 3944 CGACACGTAGAACTGCGCAAAC-ATGTGGCACGGCGGCAGCGCCATGATCTTCAGGTCCT 3886
Query 145925 CCGGGTTCCAGGCGGTGAGGACGAGCCTCCTGCTCTCG---GGGTTCCTCTTGATCTCCC 145981
|||||||| ||| | |||| || ||| || ||| |||||| || | ||
Sbjct 3885 TGGGGTTCCACGCGCTCAGGATGA---TCCGGCGGTCGTGCGGGTTCGTCCGCAGCTTGT 3829
Query 145982 CTATCAGGTCCCTGAGCTGGTCCACGCCCTGCCCCCGGTAATCTGTCTTGGAGTCCACGT 146041
| | ||| |||||||| |||||||| || ||| || | | ||| ||||
Sbjct 3828 GCACGACCTCCGCCAGCTGGTCGACGCCCTGGCCGGCGTAGTCCGCGCGCGCGTCGACGT 3769
Query 146042 ACGCGGCCCCGAAGTGCCTCCACTGGAACCCGTAGACGGGCCCCAGGTCCCCGGGCTCCC 146101
|| |||| |||||||||| ||||||||||||||| ||||| || ||||| || ||| |
Sbjct 3768 ACTCGGCGCCGAAGTGCCGCCACTGGAACCCGTACACGGGGCCGAGGTCGCCCTCCTCGC 3709
Query 146102 TGTGCCCCAGCCCGGCCCGGGCGAGGAAGTCCCGGGACCCGTTGGCGTCCCAGATCTTGA 146161
|||| |||| || | | | | ||||| | || || |||||| |||||||||||||||
Sbjct 3708 GGTGCGCCAGGCCCACGCTGTCCAGGAACGCGCGCGAGCCGTTGCCGTCCCAGATCTTGA 3649
Query 146162 CGCCCCTCGCGGAGAGCTCATTGGAGTCCGTGGACCCCCTGATGAACCAGAGCAGCTCTT 146221
||||| |||| |||| || ||| | ||| | ||||||||| |||||
Sbjct 3648 CGCCCTGCGCGCTGAGCGGCAGCGACGACGTCGCGCCCGACACGAACCAGAGGAGCTCGG 3589
Query 146222 CGAGGACCCCCCTCCAGAAGACCCTCTTGGTGGTCAGCAGGGGGAAC 146268
| || ||| ||| ||| || | |||||| || ||||| ||| ||
Sbjct 3588 CCAGCACCGCCCGGTGGAACACGCGCTTGGTCGTGAGCAGCGGGTAC 3542
Score = 152 bits (168), Expect = 6e-32
Identities = 236/324 (73%), Gaps = 21/324 (6%)
Strand=Plus/Minus
Query 145540 ACCGCCATCTCCATGGGGATGGCCGCGTGGGGGTGGTAGCCCTCCAGCGCAAAGTCCTCC 145599
|||| ||||| ||||| ||| | | ||| |||| || |||| || | |||||||||||
Sbjct 4357 ACCGACATCTTCATGGCGATCGTCTTGTGCGGGTCATACCCCTTCACCACAAAGTCCTCC 4298
Query 145600 ---GCCCTGAAGTC-AT-CTAT-GTCCTCCACCCGCCTCAGGATCCTGAGC-CTGGGAAA 145652
|||| ||| || ||| | || | |||||| ||||| ||| | |||||
Sbjct 4297 AGCGCCCACCCGTCGATACTACCGCCCGTCTCCCGCC---GGATCTCCAGCTCCGGGAAC 4241
Query 145653 GGGCCGGGGGCTCCTGGTC-AGCTGGAGCTTCAGGGGC---TCCACGTGGTTGAGGTAGA 145708
|| | |||||| | || ||||| | || || || |||||||||| | |||||
Sbjct 4240 TCGC--GCGGCTCCCGCTCCAGCTG---CGTCCGGAGCGCGTCCACGTGGTCCACGTAGA 4186
Query 145709 CGTGCGCGTCCCCCAGGACGTGGATGAAG-TCCCCGGGCTCGAGGCCCGTGAGGTGGGCG 145767
|||||||||| |||| |||||| | | | | |||||| ||||| | | ||| |||
Sbjct 4185 CGTGCGCGTCGCCCATGACGTGCGTCAGGCTGCCCGGGA-CGAGGTCGCACACGTGCGCG 4127
Query 145768 ACCATGTAGGTCAGCAGGGAGTAGCTGGCTATGTTGAAGGGCACCCCCAGCCCCATGTCC 145827
||||||| |||||||| | ||||||||| |||||||| ||||| || || ||||||||
Sbjct 4126 ACCATGTGCGTCAGCAGCGCGTAGCTGGCGATGTTGAACGGCACGCCGAGGCCCATGTCG 4067
Query 145828 CCCGAGCGCTGGTACAGCTGGCAG 145851
| || ||||||||||||||||||
Sbjct 4066 CAGGACCGCTGGTACAGCTGGCAG 4043
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 590029483216600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |