Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chrysoporthe_20austroafricana_20[genbank_20GCA_5F001051155.1_202015-
07-09] 6,415 sequences; 44,668,886 total letters
Query= NC_001973.1
Length=161046
Score E
Sequences producing significant alignments: (Bits) Value
seq3478 187 3e-42
seq1214 149 6e-31
seq373 140 3e-28
seq2574 132 5e-26
seq6049 109 6e-19
>seq3478
Length=17986
Score = 187 bits (206), Expect = 3e-42
Identities = 319/457 (70%), Gaps = 7/457 (2%)
Strand=Plus/Plus
Query 116982 AGAAGGCCGAGTGGGCGCTGCGCTGGATCGCCGGCAGAGAGGCCGCCTTCGGCGAGCGCC 117041
|||||||||| ||||| ||| | |||||| | | | ||| | ||| || ||||||
Sbjct 8207 AGAAGGCCGACTGGGCTCTGAGGTGGATCCAGGACCGTGAGTCTACCTACGCTCAGCGCC 8266
Query 117042 TGGTGGCCTTCGCGGCCGTCGAGGGCGTCTTCTTTTCGGGCAGTTTCGCCGCCATATTTT 117101
| || || || || || ||||| || | ||||| ||| |||||| |||| || |
Sbjct 8267 TTGTTGCATTTGCTGCTGTCGAAGGTATTTTCTTCAGTGGCGCTTTCGCTTCCATCTTCT 8326
Query 117102 GGCTCAAGAAACGCGGCCTCATGCCCGGCCTGACTTTCAGCAACGAGCTCATCTCCAGGG 117161
|||| ||||| || || || ||||| |||||||| ||| |||||| |||||||| | |
Sbjct 8327 GGCTGAAGAAGCGTGGTCTGATGCCTGGCCTGACCTTCTCCAACGAACTCATCTCTCGTG 8386
Query 117162 ACGAGGGTCTGCATTGCGACTTTGCCTGTTTGCTGTTCAAGCATTTGGTGCAGCGACCGA 117221
||||||||||||| ||||| ||||| ||||||||| || || | || || |
Sbjct 8387 ACGAGGGTCTGCACACTGACTTCGCCTGCTTGCTGTTCTCACACCTGAACAACCGCCCCA 8446
Query 117222 GCGCGGCGCGCGTCAGGGAG--ATCGTCACCGACGCGGTCGCCATCGAGCAGCGCTTCCT 117279
|| | |||||| || || ||| | ||||| || || ||||| ||| || |||||
Sbjct 8447 GCAAGCAGCGCGT--GGAAGCCATCATTACCGATGCTGTTGCCATTGAGAAGGAGTTCCT 8504
Query 117280 CACCGAAGCGCTG-CCGGTGCGTCTGCTGGGACTCAATTGCGAAACGATGTCGCAATACA 117338
||||| || || || |||| ||||| || | ||| | | |||| ||| ||||
Sbjct 8505 GACCGAGGCCTTGCCCTGTGC-CCTGCTCGGCATGAATGCCAACTTGATGAAGCAGTACA 8563
Query 117339 TCGAGTTCGTCGCCGACAGGCTGCTGCTCGAGCTGGTCGGCGCCAAGCACTACAACACGC 117398
|||| |||||||||||| | || || ||| || | | || ||| |||||| |
Sbjct 8564 TCGAATTCGTCGCCGACCGTCTCCTCGTCGCTCTCGGCAACGAGAAGATCTACAAGTCTA 8623
Query 117399 CCAACCCGCTGGACTTTATGAACCTCATCT-CCTTGG 117434
| ||||| | ||||| ||| | ||||| ||||||
Sbjct 8624 CTAACCCTTTCGACTTCATGGAGAACATCTCCCTTGG 8660
Score = 150 bits (166), Expect = 2e-31
Identities = 188/257 (73%), Gaps = 3/257 (1%)
Strand=Plus/Plus
Query 116636 ATGTGGCGCATGTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTG 116695
|| |||| |||||||| ||| ||||||||| |||||||||| |||||| | ||||||
Sbjct 7801 ATTTGGCAAATGTACAAGAAGCACGAGGCGTCCTTCTGGACCGCTGAGGAGATTGACCTG 7860
Query 116696 TCCAAGGACACGAGCGACTGGGAG---CGCTTGAACGACAACGAGCGCCATTTCATCAAG 116752
|| |||||| | ||||||| | || |||| ||| ||||| | ||||||
Sbjct 7861 TCTAAGGACCTGCACGACTGGAACAACCGTTTGACCGATGACGAGAAATACTTCATCTCC 7920
Query 116753 CACGTGCTGGCCTTTTTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCGT 116812
||| | || ||||| || ||||| ||||||||||| ||||| || || |||||||
Sbjct 7921 CACATCCTCGCCTTCTTTGCCGCTTCGGACGGCATCGTTAACGAAAACTTGATCGAGCGC 7980
Query 116813 TTCGCTCAGGAGGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCAGATCGCCATG 116872
||| | ||||| ||| | | ||||| || || ||||||||||| |||| | |||
Sbjct 7981 TTCAGTGCTGAGGTCCAGATTCCTGAGGCCCGTTGTTTCTACGGCTTCCAGACCATGATG 8040
Query 116873 GAGAACGTGCACTCGGA 116889
|||||| | ||||| ||
Sbjct 8041 GAGAACATCCACTCCGA 8057
>seq1214
Length=170273
Score = 149 bits (164), Expect = 6e-31
Identities = 169/227 (74%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
||||| || ||||| || || ||||||||||| || |||||| | || || || | ||
Sbjct 100887 ATGCAGATCTTCGTCAAGACCCTCACGGGCAAGACTATCACCCTTGAGGTGGAGTCTTCC 100828
Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809
|||| | | | | |||||| || || | ||||| ||||| || ||| | |||||
Sbjct 100827 GACACCATCGACAATGTCAAGGCCAAGATCCAGGACAAGGAGGGTATTCCCCCAGACCAA 100768
Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869
|| || || |||| ||| ||||| ||||| || |||| || |||||| ||||||||||
Sbjct 100767 CAGCGCCTGATCTTCGCTGGCAAGCAGCTCGAGGACGGCCGTACCCTCTCCGACTACAAC 100708
Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916
|||||||||||| |||| ||||| || || ||||| || | || ||
Sbjct 100707 ATCCAGAAGGAGTCCACCCTGCACCTGGTCCTGCGCCTGCGTGGTGG 100661
>seq373
Length=59380
Score = 140 bits (154), Expect = 3e-28
Identities = 162/216 (75%), Gaps = 2/216 (1%)
Strand=Plus/Plus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
|||||||| ||||| || || || |||||||| || |||||| |||| || ||| | |
Sbjct 42 ATGCAAATCTTCGTCAAGACCCTGACGGGCAAGACGATCACCCTCGAGGTGGAATCATCG 101
Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808
|| | | | |||| | |||| || |||| ||||| ||||| || ||| | |||||
Sbjct 102 GATACGATCGACAACG-TGAAGGCCAAGATTCAAGACAAGGAGGGTATTCCCCCAGACCA 160
Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868
||| || || |||| ||||||||| |||||||| |||| || || || ||||||||
Sbjct 161 GCAGCGTCTTATCTTCGCGGGCAAGCAGCTGGAAGACGGCCGGACGCTGTCTGACTACAA 220
Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCG 40904
||||||||||||| | || ||||| | ||| ||||
Sbjct 221 CATCCAGAAGGAGTCGACACTGCACTTGGTGCTGCG 256
>seq2574
Length=14985
Score = 132 bits (146), Expect = 5e-26
Identities = 145/193 (75%), Gaps = 0/193 (0%)
Strand=Plus/Minus
Query 40687 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCC 40746
|| ||||| || ||||| || || ||||| ||||| |||||||| | || ||||| ||
Sbjct 193 AAGATGCAGATCTTCGTCAAGACCCTCACTGGCAAGACCATCACTCTTGAGGTCGAGTCC 134
Query 40747 ACCGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGAC 40806
| |||| | | | | |||||| || || | ||||| ||||| ||||| |||||
Sbjct 133 TCTGACACCATCGACAATGTCAAGGCCAAGATCCAGGACAAGGAGGGTATCCCTCCGGAC 74
Query 40807 CAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTAC 40866
||||| || || || | ||| ||||| ||||| || || | ||||||||| |||||||
Sbjct 73 CAGCAGCGCCTGATTTTCGCTGGCAAGCAGCTCGAGGATGGCCGCACCCTCTCCGACTAC 14
Query 40867 AACATCCAGAAGG 40879
|||||||||||||
Sbjct 13 AACATCCAGAAGG 1
>seq6049
Length=106314
Score = 109 bits (120), Expect = 6e-19
Identities = 135/182 (74%), Gaps = 2/182 (1%)
Strand=Plus/Minus
Query 40699 TTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTG 40758
||||| || || || |||||||| || |||||| | || || || | |||||| | |
Sbjct 70330 TTCGTGAAGACCCTGACGGGCAAGACTATCACCCTTGAGGTGGAGTCTTCCGACACCATC 70271
Query 40759 CA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACT 40817
| |||| |||||| || || | ||||| ||||| ||||| |||| || || ||| |
Sbjct 70270 GACAACG-TCAAGGCCAAGATCCAGGACAAGGAGGGTATCCCTCCGGATCAACAGCGATT 70212
Query 40818 CATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAA 40877
|||| ||| ||||| ||||| || || | ||||| || ||||||||||||||||||
Sbjct 70211 GATCTTCGCCGGCAAGCAGCTTGAGGATGGCCGCACTCTTTCCGACTACAACATCCAGAA 70152
Query 40878 GG 40879
||
Sbjct 70151 GG 70150
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 515177885860400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |