Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chrysoporthe_20austroafricana_20[genbank_20GCA_5F001051155.1_202015- 07-09] 6,415 sequences; 44,668,886 total letters Query= NC_002687.1 Length=335593 Score E Sequences producing significant alignments: (Bits) Value seq2 118 2e-21 seq167 91.5 3e-13 >seq2 Length=102259 Score = 118 bits (130), Expect = 2e-21 Identities = 271/403 (67%), Gaps = 30/403 (7%) Strand=Plus/Minus Query 254001 CTTCCTCATTTGCTTTTCCACGGTCCTCCCGGAACAGGCAAGACGTCAACCATCCTGGCG 254060 || |||||| |||| ||| |||| || || || || |||||||| || || ||||| || Sbjct 55600 CTGCCTCATATGCTCTTCTACGGCCCACCTGGGACCGGCAAGACCTCTACGATCCTCGCC 55541 Query 254061 CTGGCCC--GAACCCTGTTGGGCGAGGGGAA--CATGAGAGAGCGCGTGCTCGAGCTGAA 254116 || ||| || | || || | ||| ||||| ||||||| ||||||||||| Sbjct 55540 CTCGCCAAGGAGCTCTACGGGCCC----GAATTCATGAAGCAGCGCGTCCTCGAGCTGAA 55485 Query 254117 CGCTTCTGACGAACGCGGGTTGGACGTCGTCCGCGACAAGATCAAG-ACTTT-CTC-CA- 254172 |||||| ||||| ||||| | | | ||||| || || ||||| ||||| | | || Sbjct 55484 CGCTTCGGACGAGCGCGGCATCTCCATTGTCCGAGAGAAAGTCAAGGACTTTGCGCGCAT 55425 Query 254173 --AGATGTCGATTTCGTCGTTC--------------CAACCCGGCTGTCCGCCTTTCAAG 254216 || || ||| | | || | | |||| ||| ||||| ||||| Sbjct 55424 GCAGCTGACGAGTCCCCCGCCCGGCTATAAGGACCGCTACCC--CTGCCCGCCCTTCAAA 55367 Query 254217 CTCGTGATCCTGGACGAGGCGGACACCATGACGGCCGACGCGCAGTCCGCCCTCCGCCGA 254276 || | || || |||||||| || | |||||| || |||||| || || |||||| Sbjct 55366 ATCATCATTCTAGACGAGGCCGATAGCATGACACAGGATGCGCAGAGTGCGCTGCGCCGA 55307 Query 254277 ACGATGGAGACGCACTCCGTTGTGACGCGTTTTTGCCTGGTGTGCAACTACGTGTCGAAG 254336 ||||||||||| || | | ||||| || || ||| | ||||||||||| || Sbjct 55306 ACGATGGAGACATACAGCAAGATCACGCGATTCTGTCTGATTTGCAACTACGTCACGCGC 55247 Query 254337 ATCATCGCCCCGCTGGCTTCTCGGTGCGCCAAGTTTCGATTCA 254379 ||||| | |||||||| | ||| |||||| ||||||| Sbjct 55246 ATCATTGATCCGCTGGCGAGCAGATGCAGCAAGTTCCGATTCA 55204 >seq167 Length=86501 Score = 91.5 bits (100), Expect = 3e-13 Identities = 113/155 (73%), Gaps = 0/155 (0%) Strand=Plus/Minus Query 254017 TCCACGGTCCTCCCGGAACAGGCAAGACGTCAACCATCCTGGCGCTGGCCCGAACCCTGT 254076 || |||| ||||| || ||||| ||||| || |||||||| || || || || | | | Sbjct 82684 TCTACGGCCCTCCAGGTACAGGGAAGACTTCCACCATCCTCGCCCTCGCTCGCCGCATCT 82625 Query 254077 TGGGCGAGGGGAACATGAGAGAGCGCGTGCTCGAGCTGAACGCTTCTGACGAACGCGGGT 254136 || | | ||||||| | || |||||||||||||| ||||| ||||| || || Sbjct 82624 ATGGAGCCGAGAACATGCGCCAGATGGTGCTCGAGCTGAATGCTTCCGACGACCGTGGCA 82565 Query 254137 TGGACGTCGTCCGCGACAAGATCAAGACTTTCTCC 254171 | ||||| || ||||| |||| ||||| ||| || Sbjct 82564 TCGACGTAGTGCGCGAACAGATTAAGACGTTCGCC 82530 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1073678144790720