Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chrysoporthe_20austroafricana_20[genbank_20GCA_5F001051155.1_202015- 07-09] 6,415 sequences; 44,668,886 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq638 327 1e-84 seq3478 114 1e-20 seq373 109 5e-19 seq1214 89.7 5e-13 >seq638 Length=259535 Score = 327 bits (362), Expect = 1e-84 Identities = 1234/1904 (65%), Gaps = 52/1904 (3%) Strand=Plus/Minus Query 22105 CTTGTCCACTGTAAACTGTAT-GGCGTTTGCGGCCGGTTTGGTGCGAAGATAATACATGC 22163 || ||| ||||| ||||| || |||| | || || | | ||||| || || ||||||| Sbjct 7915 CTGGTCGACTGTGAACTGAATCGGCGCT-GCCGCTGCCTGTGTGCGGAGGTAGTACATGC 7857 Query 22164 CCGTCTTCAGACCCATCTTCCACGCGTAAAAATGTATCGACGTCAATTTTCCATAACTCG 22223 | ||||| ||||||| |||||| || || || || || | || || | | Sbjct 7856 CAGTCTTGAGACCCAGCTTCCAACCGGTGAAGTGCATGCTAGTGATCTTGCCCATAGAAG 7797 Query 22224 GCAAGTCCATGTACACATTGAACGACTGACTCTGATCGATAAACGCTCCTCGATCGGCGG 22283 || ||||| | || | |||||| ||| ||||| || || || |||||||| | Sbjct 7796 GCTCACGCATGTGTATGTTCAGCGACTGGGACTGGTCGATGAAGGCACCACGATCGGCAG 7737 Query 22284 CCATATTTATCAATGTACGCATCGACATTTCCCATACGGTCTTGTACAGTTGCCTGATCT 22343 |||| | | | || | | ||| || ||||| ||||||||||| || | |||| | Sbjct 7736 CCATCTGCACGATGGTCCTCTGCGAGATCTCCCAGACGGTCTTGTAGAGGGCCTTGATGT 7677 Query 22344 CTAACGGTATCGATTCGA-TCCTCTGGACGGACCCGTTATTGTGTATGATCAAATTTTTA 22402 | || || | | ||| | |||||| || || | | ||||| || || Sbjct 7676 CATCTGGGAT-GCTGCGAATATTCTGGATAGAGCCATCCTCAGCGATGATGCGGTTCTTC 7618 Query 22403 ATCGTATCGTTCCACAAACCG-ATGGCGGTCAAATCTTTGACCAG--ATGACGGTTCACC 22459 | || ||||| ||| | || || ||| |||| ||| ||| | || || Sbjct 7617 AGGTCCTCAGACCACAGACCACACTGCAC-CAGATCCTTGAGCAGCCATG--GATTGACA 7561 Query 22460 ACTTGAAACTCGCCGGACAAGACGCGGCGTTGGTAAATGTTGGATGTGAACGGTTCGAAA 22519 ||||| |||||||| | | |||||||| || || ||||||||||| | || || || Sbjct 7560 ACTTGGAACTCGCCAGCGAGCACGCGGCGCTGATAGATGTTGGATGTATAGGGCTCAAAG 7501 Query 22520 GATTCATTGTTTCCCAGTATCTGAGCGGTCGAAGCGGTCGGCATCGGCGCCAACAGTAGC 22579 | || ||||| ||||| ||||| | ||||| || || ||||| ||||||| || | Sbjct 7500 CACTCGTTGTTGCCCAGGATCTGCGAAGTCGAGGCAGTGGGCATGGGCGCCATCAACAAG 7441 Query 22580 GAGTTTCTCAAGCCGTGCT--TTGAAATTTTACTCTTGA--GCATCGACCAGTCCCACAG 22635 ||| | | ||||||| |||| | || ||| | || || ||||||||| || Sbjct 7440 CTGTTGCGGACACCGTGCTGCTTGA--TCTTGGCCTTCAAGGCGTC--CCAGTCCCAGAG 7385 Query 22636 ATCGGACGGCGTCACATTGTCCCACATATCGTATTGCA--ACACGCCGCGACTCGCCGGG 22693 ||| || ||| | ||||||| |||||| ||||| |||| | || | | || || | | Sbjct 7384 ATCAGAGGGCTTGACATTGTTCCACATGTCGTACTGCAGGATACCCTGGGAGACGG-GAG 7326 Query 22694 CTGCCTTCGTACGTTTCGTACGGACCATATATCGCGGCAAGTTCGCAGCTCGCCTCCAAC 22753 | ||| |||| | | ||| || |||| | | ||||| || || || | Sbjct 7325 ATCCCT-CGTATGATGAGTAGGGGCCATCAACCTTGGCAATGTCACACGATGCGGTGAGG 7267 Query 22754 GCGCCGTAATATATAGTCTCGAAGATTTTCTTGTTCAATTCGGCGGC----GGCGACGCT 22809 ||| ||| || || ||||||||||| | |||||||| || || || ||| Sbjct 7266 GCGGCGTGGTAGATGGTCTCGAAGATCTGCTTGTTCAGCTCACGAGCCTCAGGTGAC--- 7210 Query 22810 TTCGTACGGCATACGCATCATCACGAACGCGTCCGCCATACCCTGAACGCCTATACCGAT 22869 ||| | ||||| || | || ||| || || |||| |||||| ||||| | || || Sbjct 7209 -TCGAAAGGCATGCGGAGGGCCAAGAAAGCATCGGCCAGACCCTGGACGCCCACGCCAAT 7151 Query 22870 CGGTCGGTTTTTCAGATTCGACACTTTTG--CCTCGGGCAAAGGATACCAATTCGAATCG 22927 || |||| || || | ||| | |||| || | |||||| || |||| Sbjct 7150 AGGACGGTGGCGCATGTTG--CTCTTGCGGGCCTCCGGAACAGGATAGTGGTTGATATCG 7093 Query 22928 ATTGTTCTGTTCAAGTTTCTGGTCACAATTTTCGTTATNNNNNNNNNNNNNTCAAAGTCG 22987 || | |||||| ||| | || | | || | | |||| Sbjct 7092 ATGATCTTGTTCAGGTTGCGAACGACGACCTGGGTGACTTCATGCAGCAACTGGAAGTTA 7033 Query 22988 TAAACGCCCGATT---GTA--CAACAAACTTGTTG-ACGGCGATCGAGGCAAGATTGCAT 23041 || ||| | ||| ||| | || |||| || | | |||||| || || || ||||| Sbjct 7032 TAG-CGCTC-ATTCTCGTAGTCGACGAACT-GTGGCAGGGCGATAGACGCCAGGTTGCAG 6976 Query 23042 ACGGCCACCTCGTCTTTGGACGTGTACTCTACAATTTCGGTACATAGATTGCTACACTTT 23101 || || ||||| || | | ||||| | || || || || || ||| | Sbjct 6975 ACAGCAACCTCATCAGGAGCAGAATACTCGATGATCTCAGTGCAAAGGTTGGAGCTGCGA 6916 Query 23102 ATCGTGCCCAAATTGCTCTGGTTGCTTTTTCGATTGCACGAATCCTTGTAGAGCATGTAC 23161 || ||||| | || |||||||||| || || ||| ||||||||| | |||| | Sbjct 6915 ATGGTGCCAAGGTTCTTCTGGTTGCTCTTGCGGTTGGCGTGATCCTTGTACAACATGAAG 6856 Query 23162 GGCGTGCCCGTCTCGACCTGCGACTCGATGATCGCTCGCCACATAGTCTGAGCGTGAACA 23221 || |||| |||||| || | ||||| ||| || ||| | |||| || | | Sbjct 6855 GGGTTGCCTGTCTCGGTTTGAGCCTCGAGGATGGCATACCAGAGCTTCTGCGCCTTCAGG 6796 Query 23222 CGTCGCACGTACCTG-CCTTCTTCCTCGTACTTTTGGTACAACGCGTCAAATTCGGCACC 23280 ||| | | | || || ||||||||| | ||||| || || || || | || Sbjct 6795 -GTCTTTTGGCCGCGACCCTCGCGCTCGTACTTCTCGTACAGAGCCTCGAACTCCTCGCC 6737 Query 23281 GTAACAGTCGGCCAGGCCGGGCGATTGCATCGGACACATGAGACTCCACATTGAGTCATT 23340 ||| |||||||| |||||||| | | | || ||||| ||| |||| || || Sbjct 6736 GTAGCAGTCGGCAAGGCCGGGGCACTCGTTGGGGCACATCAGAGTCCAGTCGCCGTTCTT 6677 Query 23341 TTCAACGCGTCTCATAAAAAGATCCGGTATCCATAGAGCGTAGAACAGTTCGCGGGCGCG 23400 || || || |||| || |||||||| ||||| || || ||| || || || || || Sbjct 6676 CTCTACACGCTTCATGAAGAGATCCGGGATCCAGAGGGCAAGGAAGAGGTCACGAGCACG 6617 Query 23401 CACCTCCTCTTTGCCGGTGTTCTTTTTCAAATCCAAAAAGTCCAACACGTCCGCATGCCA 23460 ||||| || || ||| |||||| || || | || || || || || || ||||| Sbjct 6616 GACCTCTTCCTTTCCGTGGTTCTTCCGCAGGTCGAGGAACTCGAAGACATCAGCGTGCCA 6557 Query 23461 CGGCTCGAGGTAAACGGCAAACGCGCCCGGTCTCTTATTGCCGCCCTGATCGACGTAACG 23520 ||||| ||||| | |||||| || || || | ||||||||| |||||||||||||| || Sbjct 6556 TGGCTCCAGGTAGATGGCAAAAGCACCGGGGCGCTTATTGCCACCCTGATCGACGTATCG 6497 Query 23521 GGCCGTGTTGTTGTACACTCTTAGCATCGGCACGAGACCGTTGGACGCGCCGCCTACGCC 23580 ||| ||||||||| | || | | ||| || | || || ||||||| |||| ||| Sbjct 6496 GGCAGTGTTGTTGAAGACACGCAACATAGGGATGATGCCATTGGACGTGCCGTTGGTGCC 6437 Query 23581 CGCCACACTCGAACCTTTTGCTCGAACGTTGTGAACGTGGAAACCTATGCCTCCGCCCGA 23640 || | || || | || || | | ||| |||| || ||| |||||||| || Sbjct 6436 AGCGATGTAGGAGCCGGTGGCACGGATGCGGTGGACGTTGAGACCAATGCCTCCAGCCAT 6377 Query 23641 TTTCGATATCATCGCGCATTGTTTCAGAGTGTCGTAGATGCCCTCGATGCTGTCCTCTTT 23700 || || ||||| || || ||||| || || ||||||||||| ||||||||||| || Sbjct 6376 CTTGGAGATCATGGCACAGGTCTTCAGGGTATCATAGATGCCCTCAATGCTGTCCTCCTT 6317 Query 23701 GGTCGCGACCAAGAAACACGAAGACATTTGCGCTTTGGGCGTAGCGGCCGAGAACAGTGT 23760 | | || | ||| ||||| |||| ||||| | ||||| |||| |||||| || Sbjct 6316 CATGTCAACGAGGAAGCACGACGACAACTGCGCCTGAGGCGTGCCGGCATTGAACAGCGT 6257 Query 23761 CGGGCTGGCGTGCGTAAAGTATCCATTCGACAT-TAGATTGTACGTGTCGATGGCGGCAT 23819 || ||||| || ||| | || ||||| ||| ||||| || || | | | Sbjct 6256 TGGCGACGCGTGTGTGAAGAACTTGTTGGACATGTAG-TTGTAGGTCTCAAGAACCCTCT 6198 Query 23820 CAATGTCCTCTCCGTGTATACCGATGGCGACGCGCATCATCATGTATTGAGGTCTCTCGA 23879 | |||| || || || || | ||||| ||||||| ||||| || || | ||||| Sbjct 6197 CGATGTTGTCCCCCCAGATGCCAACAGCGACACGCATCAGCATGTGCTGTGGCCGCTCGA 6138 Query 23880 C--CGTGACGCCGTTAATTTTGAACAGATATGAACGTTGCATCGTTTTAAATCCAAAATA 23937 | | | | ||||| | ||||| ||||| ||||| | | || || || ||||| || Sbjct 6137 CGACTTTA--CCGTTGAGTTTGAGGAGATACGAACGCTCGAGGGTCTTGAAGCCAAAGTA 6080 Query 23938 GTCATAGTTAAAGTCACGATCGTGCACTATGGCCGAATTCAAAC 23981 | ||| | |||| ||||| | || || || ||| |||||| Sbjct 6079 TTGATATTGGTAGTCGCGATCATAGACAATAGCAGAA-TCAAAC 6037 >seq3478 Length=17986 Score = 114 bits (126), Expect = 1e-20 Identities = 213/310 (69%), Gaps = 2/310 (1%) Strand=Plus/Plus Query 57981 GCGTTCGCCGCCGTCGAAGGTATATTCTTTTCGGGCAGCTTT-GCGGCAATATTTTGGAT 58039 || || || || ||||||||||| ||||| ||| ||||| || | || || ||| | Sbjct 8272 GCATTTGCTGCTGTCGAAGGTATTTTCTTCAGTGGC-GCTTTCGCTTCCATCTTCTGGCT 8330 Query 58040 GAAGAAACGCGGCCTGATGCCCGGCCTGACGTTTAGCAACGAGTTGATATCGCGCGACGA 58099 |||||| || || |||||||| |||||||| || |||||| | || || || ||||| Sbjct 8331 GAAGAAGCGTGGTCTGATGCCTGGCCTGACCTTCTCCAACGAACTCATCTCTCGTGACGA 8390 Query 58100 GGGTCTCCATACTGATTTTGCGTGCCTAATGTACTCTCACATTGTCAATAAACCGACGCG 58159 |||||| || ||||| || || ||| | ||| ||| ||| | ||| || | Sbjct 8391 GGGTCTGCACACTGACTTCGCCTGCTTGCTGTTCTCACACCTGAACAACCGCCCCAGCAA 8450 Query 58160 GGATCGCATCTTGGACATTATCACCGAGGCGGTCGCGATCGAAAATGAGTTTGTCACCGA 58219 | | ||| | | ||| || ||||| || || || || || || ||||| | ||||| Sbjct 8451 GCAGCGCGTGGAAGCCATCATTACCGATGCTGTTGCCATTGAGAAGGAGTTCCTGACCGA 8510 Query 58220 AGCCCTACCGGTGGCCATGCTCGGTATGAACAATGATTTGATGTCAAAGTACATTGAGTT 58279 ||| | || ||| ||||||| ||||| | |||||| ||||||| || || Sbjct 8511 GGCCTTGCCCTGTGCCCTGCTCGGCATGAATGCCAACTTGATGAAGCAGTACATCGAATT 8570 Query 58280 TGTTGCCGAC 58289 || |||||| Sbjct 8571 CGTCGCCGAC 8580 >seq373 Length=59380 Score = 109 bits (120), Expect = 5e-19 Identities = 169/239 (71%), Gaps = 2/239 (1%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 |||||||| ||||| ||||| ||||| ||||| ||||||||| |||| || ||| | || Sbjct 42 ATGCAAATCTTCGTCAAGACCCTGACGGGCAAGACGATCACCCTCGAGGTGGAATCATCG 101 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 || | |||| | || || | || |||||||| || | || || |||||| Sbjct 102 GATACGATCGACAACGTGAAGGCCAAGATTCAAGACAAGGAGGGTATTCCCCCAGACCAG 161 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 |||||||| || ||||| ||||| ||| |||||||| ||| || || || ||| Sbjct 162 CAGCGTCTTATCTTCGCGGGCAAGCAGCTGGAAGACGGCCGGACGCTGTCTGACTACAAC 221 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAG-GGGCGGTAG-AAGCGGT 31429 || || || || ||||| || || |||| || | ||| | || || || ||||||| Sbjct 222 ATCCAGAAGGAGTCGACACTGCACTTGGTGCTGCGTCTGCGTGGTGGGCAGTAAGCGGT 280 >seq1214 Length=170273 Score = 89.7 bits (98), Expect = 5e-13 Identities = 157/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 |||||| || ||||| ||||| || || ||||| || |||||| | || || || | || Sbjct 100888 CATGCAGATCTTCGTCAAGACCCTCACGGGCAAGACTATCACCCTTGAGGTGGAGTCTTC 100829 Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 ||||| |||| | ||||| | || ||||||||| || | || || ||||| Sbjct 100828 CGACACCATCGACAATGTCAAGGCCAAGATCCAGGACAAGGAGGGTATTCCCCCAGACCA 100769 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 ||||| || || ||||||||||| ||| | || ||| || | ||| || || Sbjct 100768 ACAGCGCCTGATCTTCGCTGGCAAGCAGCTCGAGGACGGCCGTACCCTCTCCGACTACAA 100709 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGT 31420 ||| || || || || || || || ||||| || | ||| | || ||| Sbjct 100708 CATCCAGAAGGAGTCCACCCTGCACCTGGTCCTGCGCCTGCGTGGTGGT 100660 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445730655106800