Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chrysoporthe_20austroafricana_20[genbank_20GCA_5F001051155.1_202015-
07-09] 6,415 sequences; 44,668,886 total letters
Query= NC_003391.1
Length=205719
Score E
Sequences producing significant alignments: (Bits) Value
seq638 140 4e-28
seq3478 122 1e-22
>seq638
Length=259535
Score = 140 bits (154), Expect = 4e-28
Identities = 381/578 (66%), Gaps = 14/578 (2%)
Strand=Plus/Minus
Query 66027 GGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATC 66086
|| ||||||| | ||| || |||| | || || || ||||| |||||||| || |||
Sbjct 6705 GGGCACATCAGAGTCCAGTCGCCGTTCTTCTCTACACGCTTCATGAAGAGATCCGGGATC 6646
Query 66087 CAAAGAGCTATAAATAAATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGA 66146
|| || || | || | || | | | || || ||||| ||||| ||
Sbjct 6645 CAGAGGGCAAGGAAGAGGTCACGAGCACGGACCTCTTCCTTTCCGTGGTTCTTCCGCAGG 6586
Query 66147 TCGAGGAACGCCATAATATCATAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGC 66206
||||||||| | | | |||| ||||| || |||| ||| ||||| | | | || ||
Sbjct 6585 TCGAGGAACTCGAAGACATCAGCGTGCCATGGCTCCAGGTAGATGGCAAAAGCACCGGGG 6526
Query 66207 CGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGA 66266
|| || || || |||||||| | ||||| || ||||| || | || | |||||| ||
Sbjct 6525 CGCTTATTGCCACCCTGATCGACGTATCGGGCAGTGTTGTTGAAGACACGCAACATAGGG 6466
Query 66267 ATAATACCATTGGATGTACCATTGGTCCCGGAGATATAGCTTCCACTTGCACGAATATTA 66326
|| || |||||||| || || ||||| || | ||| ||| || | ||||| ||
Sbjct 6465 ATGATGCCATTGGACGTGCCGTTGGTGCCAGCGATGTAGGAGCCGGTGGCACGGATGCGG 6406
Query 66327 CTAA--TTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACG 66384
| |||| |||| || || || ||||| || ||||| | || || || | |
Sbjct 6405 TGGACGTTGA--GACCAATGCCTCCAGCCATCTTGGAGATCATGGCACAGGTCTTCAGGG 6348
Query 66385 TATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTT 66444
|||||||||||||||| || || || ||| |||||| || || || || |||| |
Sbjct 6347 TATCATAGATGCCCTCAATGCTGTCCTCCTTCATGTCAACGAGGAAGCACGACGACAACT 6288
Query 66445 GGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAG 66504
| || || || ||||| || | || || || ||||| || || | || | |
Sbjct 6287 GCGCCTGAGGCGTGCCGGCATTGAACAGCGTTGGCGACGCGTGTGTGAAGAACTTGTTGG 6228
Query 66505 A-AAGTAGATTGTACGTCTCAATAGCTGAGTCTATAT----CCCATTGATGAATTCCTAC 66559
| | |||| ||||| ||||||| | | || || | ||| |||| || ||
Sbjct 6227 ACATGTAG-TTGTAGGTCTCAAGAACCCTCTCGATGTTGTCCCCCCAGATG----CCAAC 6173
Query 66560 TGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGA 66597
||||||||||| | ||||||||| || | || ||||
Sbjct 6172 AGCGACACGCATCAGCATGTGCTGTGGCCGCTCGACGA 6135
>seq3478
Length=17986
Score = 122 bits (134), Expect = 1e-22
Identities = 158/218 (72%), Gaps = 3/218 (1%)
Strand=Plus/Minus
Query 36149 AACATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAA 36208
|||| ||| || ||||| || ||| ||||||||||| | | || | |||||||||
Sbjct 8423 AACAGCAAGCAGGCGAAGTCAGTGTGCAGACCCTCGTCACGAGAGATGAGTTCGTTGGAG 8364
Query 36209 AACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCA 36268
|| || || || ||||| || |||||||| || ||||| || ||||| || || | |||
Sbjct 8363 AAGGTCAGGCCAGGCATCAGACCACGCTTCTTCAGCCAGAAGATGGAAGCGAAAGCGCCA 8304
Query 36269 GAAAAGAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATA---ACCGGCA 36325
|||||||| ||||| || || ||||| |||| ||| | || | || | ||
Sbjct 8303 CTGAAGAAAATACCTTCGACAGCAGCAAATGCAACAAGGCGCTGAGCGTAGGTAGACTCA 8244
Query 36326 CTGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTT 36363
| ||| || |||||| | ||||||| |||||||||||
Sbjct 8243 CGGTCCTGGATCCACCTCAGAGCCCAGTCGGCCTTCTT 8206
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 658120022768600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |