Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chrysoporthe_20austroafricana_20[genbank_20GCA_5F001051155.1_202015- 07-09] 6,415 sequences; 44,668,886 total letters Query= NC_003401.1 Length=133719 Score E Sequences producing significant alignments: (Bits) Value seq2112 120 3e-22 >seq2112 Length=5501 Score = 120 bits (132), Expect = 3e-22 Identities = 156/216 (72%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 20877 ATCTTCAGCCGCGGAAACGGACGCGGGGTCCTCCGCAGCTGAAGCAGCAGGGGATCAACG 20936 |||| |||| ||| ||| ||||| || | |||||| | | || | || ||| Sbjct 4258 ATCTCCAGCTCCGGGAACTCGCGCGGCTCCCGCTCCAGCTGCGTCCGGAGCGCGTCCACG 4199 Query 20937 TGGTTGTTGTAAACGTGGGCGTCACCCAAGGTGTGCACAAAGTCTCCCGGGGTCAGGCCC 20996 |||| ||| ||||| ||||| |||| | |||| | | |||||| ||| | Sbjct 4198 TGGTCCACGTAGACGTGCGCGTCGCCCATGACGTGCGTCAGGCTGCCCGGGACGAGGTCG 4139 Query 20997 GTGACGTGAGCGATCAGATACGTCAGGAGGGCGTAGCTGGCGATGTTAAACGGGACCCCG 21056 ||||| |||| || | |||||| || ||||||||||||||||| ||||| || ||| Sbjct 4138 CACACGTGCGCGACCATGTGCGTCAGCAGCGCGTAGCTGGCGATGTTGAACGGCACGCCG 4079 Query 21057 AGGCCCATGTCGGCGGACCTCTGGTACAGCTGGCAG 21092 |||||||||||| ||||| |||||||||||||||| Sbjct 4078 AGGCCCATGTCGCAGGACCGCTGGTACAGCTGGCAG 4043 Score = 111 bits (122), Expect = 1e-19 Identities = 215/309 (70%), Gaps = 9/309 (3%) Strand=Plus/Minus Query 21110 CACGTAAAACTGACACAAA-ACGTGACAAGGAGGGAGAGCCATCCGCGCGAGGTCCGCGG 21168 |||||| ||||| | |||| | ||| || || || || ||||| | |||||| || Sbjct 3941 CACGTAGAACTG-CGCAAACATGTGGCACGGCGGCAGCGCCATGATCTTCAGGTCCTTGG 3883 Query 21169 GGTTCCACGCGCACATAACGATGCGCCGATCGTGGGGC--CGCCTGTTAATTAGATCCAC 21226 |||||||||||| || | ||| || || ||||| || || | | || | ||| Sbjct 3882 GGTTCCACGCGCTCAGGATGATCCGGCGGTCGTGCGGGTTCGTCCGCAGCTTG--TGCAC 3825 Query 21227 CACGTAACGCAGCTGGTCCACCCCCTGACCCTCGTAGTTGGCGTCGGCCCCCCTGTACTC 21286 || | ||||||||| || ||||| || |||||| ||| || | |||||| Sbjct 3824 GACCTCCGCCAGCTGGTCGACGCCCTGGCCGGCGTAGTCCGCGCGCGCGTCGACGTACTC 3765 Query 21287 CGCCCCAAAATGTCTCCACTGGAACCCGTACACCGGCCCCAGATCGCCCTCGCGGCGGTC 21346 || || || || | |||||||||||||||||| || || || |||||||| ||||| Sbjct 3764 GGCGCCGAAGTGCCGCCACTGGAACCCGTACACGGGGCCGAGGTCGCCCTCCTCGCGGTG 3705 Query 21347 CCCGAAGCCCTGCGCCG-CCAAAAAGGCGCGGGACCCGTGCGCGTCCCAAATTTTTACGC 21405 | | | |||| ||| | ||| || ||||| || |||| ||||||| || || |||| Sbjct 3704 CGCCAGGCCC-ACGCTGTCCAGGAACGCGCGCGAGCCGTTGCCGTCCCAGATCTTGACGC 3646 Query 21406 CGCGGCGCG 21414 | | ||||| Sbjct 3645 C-CTGCGCG 3638 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427742555269200