Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chrysoporthe_20austroafricana_20[genbank_20GCA_5F001051155.1_202015- 07-09] 6,415 sequences; 44,668,886 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq638 167 3e-36 seq3478 131 2e-25 >seq638 Length=259535 Score = 167 bits (184), Expect = 3e-36 Identities = 396/593 (67%), Gaps = 14/593 (2%) Strand=Plus/Minus Query 79891 CCAGGACATTCGTCAGGACACATCAACGACCACTCTCCATCATCCTTTACTCGTTTCATA 79950 || || || |||| || ||||||| | ||| || || | | || ||| || ||||| Sbjct 6720 CCGGGGCACTCGTTGGGGCACATCAGAGTCCAGTCGCCGTTCTTCTCTACACGCTTCATG 6661 Query 79951 AAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGCTCCTCGTTTCCT 80010 |||||||| || ||||| || || | || || || | | | ||| || ||||| Sbjct 6660 AAGAGATCCGGGATCCAGAGGGCAAGGAAGAGGTCACGAGCACGGACCTCTTCCTTTCCG 6601 Query 80011 GTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATG 80070 ||||| || ||||||||| | | | ||||| ||||| || |||| ||| ||| Sbjct 6600 TGGTTCTTCCGCAGGTCGAGGAACTCGAAGACATCAGCGTGCCATGGCTCCAGGTAGATG 6541 Query 80071 GCCATAACTCCCGGTCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAA 80130 || | | | || || || || || || |||||||| | ||||| || ||||| || | Sbjct 6540 GCAAAAGCACCGGGGCGCTTATTGCCACCCTGATCGACGTATCGGGCAGTGTTGTTGAAG 6481 Query 80131 ACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCGGAGATATAGCTTCCA 80190 || | |||||| || || || |||||||| || || ||||| || | ||| ||| || Sbjct 6480 ACACGCAACATAGGGATGATGCCATTGGACGTGCCGTTGGTGCCAGCGATGTAGGAGCCG 6421 Query 80191 CTGGCACGAATATTACTAA--TTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATG 80248 ||||||| || | |||| |||| || || || ||||| || ||||| | | Sbjct 6420 GTGGCACGGATGCGGTGGACGTTGA--GACCAATGCCTCCAGCCATCTTGGAGATCATGG 6363 Query 80249 CGCATCGTTTTAACGTATCATAGATGCCCTCTATGCTATCATCAATCATGTTAAGTAGAA 80308 | || || | ||||||||||||||||| ||||| || || |||||| || || | Sbjct 6362 CACAGGTCTTCAGGGTATCATAGATGCCCTCAATGCTGTCCTCCTTCATGTCAACGAGGA 6303 Query 80309 AACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCG 80368 | || |||| || || || || ||||| || | || || || ||||| | Sbjct 6302 AGCACGACGACAACTGCGCCTGAGGCGTGCCGGCATTGAACAGCGTTGGCGACGCGTGTG 6243 Query 80369 TAAACCATTTTTCAGACA-GTAGATTGTACGTCTCAATAGCTGATTCTATAT----CCCA 80423 | || | || | |||| |||| ||||| ||||||| | | || || | ||| Sbjct 6242 TGAAGAACTTGTTGGACATGTAG-TTGTAGGTCTCAAGAACCCTCTCGATGTTGTCCCCC 6184 Query 80424 TTGATGAATTCCTACCGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGA 80476 |||| || || ||||||||||| | ||||||||| || | || |||| Sbjct 6183 CAGATG----CCAACAGCGACACGCATCAGCATGTGCTGTGGCCGCTCGACGA 6135 >seq3478 Length=17986 Score = 131 bits (144), Expect = 2e-25 Identities = 160/218 (73%), Gaps = 3/218 (1%) Strand=Plus/Minus Query 49951 AACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAA 50010 |||| ||| || ||||| || ||||||||||||||| | | || ||||||||||| Sbjct 8423 AACAGCAAGCAGGCGAAGTCAGTGTGCAGACCCTCGTCACGAGAGATGAGTTCGTTGGAG 8364 Query 50011 AACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGACCCA 50070 || || || || ||||| || |||||||| || ||||| || ||||| || || | ||| Sbjct 8363 AAGGTCAGGCCAGGCATCAGACCACGCTTCTTCAGCCAGAAGATGGAAGCGAAAGCGCCA 8304 Query 50071 GAAAAGAAGATTCCTTCTACTGCGGCAAAGGCAACAAGTCTCTCTCCATAACTGG---CG 50127 ||||| || ||||| || || ||||| |||||||| | || | || | | | Sbjct 8303 CTGAAGAAAATACCTTCGACAGCAGCAAATGCAACAAGGCGCTGAGCGTAGGTAGACTCA 8244 Query 50128 CTGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTT 50165 | ||| || |||||| | ||||||| ||||||||||| Sbjct 8243 CGGTCCTGGATCCACCTCAGAGCCCAGTCGGCCTTCTT 8206 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 718211203820600