Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chrysoporthe_20austroafricana_20[genbank_20GCA_5F001051155.1_202015- 07-09] 6,415 sequences; 44,668,886 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq638 150 3e-31 seq3478 127 3e-24 >seq638 Length=259535 Score = 150 bits (166), Expect = 3e-31 Identities = 349/522 (67%), Gaps = 8/522 (2%) Strand=Plus/Plus Query 96864 CGATACGTTACACAGGGCGGCAATAAACGGCCAGGCGCTATAGCCGTCTACTTGGAACCT 96923 |||||||| ||||| |||||||| || || || ||| | ||| ||||| |||| || Sbjct 6497 CGATACGTCGATCAGGGTGGCAATAAGCGCCCCGGTGCTTTTGCCATCTACCTGGAGCCA 6556 Query 96924 TGGCACGCGGACGTTTTTGACTTTATCGAGATGCGCAAAAACTCTGGCTTTGAAGAGGCA 96983 |||||||| || || || || || |||| |||| || ||| || ||||||| Sbjct 6557 TGGCACGCTGATGTCTTCGAGTTCCTCGACCTGCGGAAGAACCACGGAAAGGAAGAGGTC 6616 Query 96984 CGAGCCAGGGACTTGTTTTATGCACTCTGGGTGCCAGATTTGTTCATGAAGCGCGTCAAC 97043 || || | ||| | || ||| |||||| | || ||| | ||||||||||| || | Sbjct 6617 CGTGCTCGTGACCTCTTCCTTGCCCTCTGGATCCCGGATCTCTTCATGAAGCGTGTAGAG 6676 Query 97044 GACGGTGGCTACTGGAGCCTAATGTGCCCCGACTCGTCACCCGGTCTGTCCGATTGCTGG 97103 | ||| |||||| || ||||||||| || || ||||| || |||| |||| Sbjct 6677 AAGAACGGCGACTGGACTCTGATGTGCCCCAACGAGTGCCCCGGCCTTGCCGACTGCTAC 6736 Query 97104 GGCGAAGAGTTTGAGGCCAAGTACACGGCCTACGAGCAAGAGGGCCGATACGTGAGACGA 97163 ||||| ||||| ||||| |||| | ||||||| ||||| || || | | | Sbjct 6737 GGCGAGGAGTTCGAGGCTCTGTACGAGAAGTACGAGCGCGAGGGTCG---CG-GCCAAAA 6792 Query 97164 GTCGATGCACG---AGAA-CTGTGGAAGGCCATCGTGACGGCTCAGGTAGAGACTGGAAC 97219 | | || | | |||| || ||| | |||||| | |||||| ||||| || | Sbjct 6793 GACCCTGAAGGCGCAGAAGCTCTGGTATGCCATCCTCGAGGCTCAAACCGAGACAGGCAA 6852 Query 97220 TCCGTACATTCTCTACAAGGATACCGTGAATCGCAACAGCAACCAACGCCACTTGGGCAC 97279 || | ||| | ||||||||| || || ||||| |||||||| || | ||||| Sbjct 6853 CCCCTTCATGTTGTACAAGGATCACGCCAACCGCAAGAGCAACCAGAAGAACCTTGGCAC 6912 Query 97280 CATCAAGGGCTCCAATCTGTGCACGGAAATTGTAGAGTACGCCTCTCCGGACGAGACGGC 97339 ||| ||||||| || ||||| || || | ||||| | |||| || ||| || Sbjct 6913 CATTCGCAGCTCCAACCTTTGCACTGAGATCATCGAGTATTCTGCTCCTGATGAGGTTGC 6972 Query 97340 AGTTTGCGTTCTGGCATCGGTCAATCTGCCCAAGTTTGTAGA 97381 || ||| ||||| || || ||||| |||| || || Sbjct 6973 TGTCTGCAACCTGGCGTCTATCGCCCTGCCACAGTTCGTCGA 7014 >seq3478 Length=17986 Score = 127 bits (140), Expect = 3e-24 Identities = 195/278 (70%), Gaps = 0/278 (0%) Strand=Plus/Plus Query 125019 ATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTGGACGGTCGAAGAGGTCGATCTG 125078 |||||| |||||||||| ||| |||| ||||| ||||| | || ||| | || ||| Sbjct 7801 ATTTGGCAAATGTACAAGAAGCACGAGGCGTCCTTCTGGACCGCTGAGGAGATTGACCTG 7860 Query 125079 TCCAAGGACCTGTACGATTGGGAGACTCGTTTGACTGAAACTGAGCGAGAGTTTATATCG 125138 || ||||||||| |||| ||| | | |||||||| || ||| | | || || || Sbjct 7861 TCTAAGGACCTGCACGACTGGAACAACCGTTTGACCGATGACGAGAAATACTTCATCTCC 7920 Query 125139 CACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCGTCAACGACAATCTGTTGACACGA 125198 ||||| | ||||||||||||| || || || ||||| ||||| || || | || Sbjct 7921 CACATCCTCGCCTTCTTTGCCGCTTCGGACGGCATCGTTAACGAAAACTTGATCGAGCGC 7980 Query 125199 TTCTCTCAAGAGTTGACCATTCCAGAGGTGTCGTGCTTTTACGGATTCCAAATCATGATT 125258 ||| | ||| | ||||| |||| || || ||||| ||||| | |||||| Sbjct 7981 TTCAGTGCTGAGGTCCAGATTCCTGAGGCCCGTTGTTTCTACGGCTTCCAGACCATGATG 8040 Query 125259 GAGAACGTGCACTCGGAAATGTACTCTACACTGATTGA 125296 |||||| | ||||| || | |||||| |||||||| Sbjct 8041 GAGAACATCCACTCCGAGACTTACTCTCTCCTGATTGA 8078 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 740999776315400