Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chrysoporthe_20austroafricana_20[genbank_20GCA_5F001051155.1_202015-
07-09] 6,415 sequences; 44,668,886 total letters
Query= NC_004156.2
Length=231621
Score E
Sequences producing significant alignments: (Bits) Value
seq638 150 3e-31
seq3478 127 3e-24
>seq638
Length=259535
Score = 150 bits (166), Expect = 3e-31
Identities = 349/522 (67%), Gaps = 8/522 (2%)
Strand=Plus/Plus
Query 96864 CGATACGTTACACAGGGCGGCAATAAACGGCCAGGCGCTATAGCCGTCTACTTGGAACCT 96923
|||||||| ||||| |||||||| || || || ||| | ||| ||||| |||| ||
Sbjct 6497 CGATACGTCGATCAGGGTGGCAATAAGCGCCCCGGTGCTTTTGCCATCTACCTGGAGCCA 6556
Query 96924 TGGCACGCGGACGTTTTTGACTTTATCGAGATGCGCAAAAACTCTGGCTTTGAAGAGGCA 96983
|||||||| || || || || || |||| |||| || ||| || |||||||
Sbjct 6557 TGGCACGCTGATGTCTTCGAGTTCCTCGACCTGCGGAAGAACCACGGAAAGGAAGAGGTC 6616
Query 96984 CGAGCCAGGGACTTGTTTTATGCACTCTGGGTGCCAGATTTGTTCATGAAGCGCGTCAAC 97043
|| || | ||| | || ||| |||||| | || ||| | ||||||||||| || |
Sbjct 6617 CGTGCTCGTGACCTCTTCCTTGCCCTCTGGATCCCGGATCTCTTCATGAAGCGTGTAGAG 6676
Query 97044 GACGGTGGCTACTGGAGCCTAATGTGCCCCGACTCGTCACCCGGTCTGTCCGATTGCTGG 97103
| ||| |||||| || ||||||||| || || ||||| || |||| ||||
Sbjct 6677 AAGAACGGCGACTGGACTCTGATGTGCCCCAACGAGTGCCCCGGCCTTGCCGACTGCTAC 6736
Query 97104 GGCGAAGAGTTTGAGGCCAAGTACACGGCCTACGAGCAAGAGGGCCGATACGTGAGACGA 97163
||||| ||||| ||||| |||| | ||||||| ||||| || || | | |
Sbjct 6737 GGCGAGGAGTTCGAGGCTCTGTACGAGAAGTACGAGCGCGAGGGTCG---CG-GCCAAAA 6792
Query 97164 GTCGATGCACG---AGAA-CTGTGGAAGGCCATCGTGACGGCTCAGGTAGAGACTGGAAC 97219
| | || | | |||| || ||| | |||||| | |||||| ||||| || |
Sbjct 6793 GACCCTGAAGGCGCAGAAGCTCTGGTATGCCATCCTCGAGGCTCAAACCGAGACAGGCAA 6852
Query 97220 TCCGTACATTCTCTACAAGGATACCGTGAATCGCAACAGCAACCAACGCCACTTGGGCAC 97279
|| | ||| | ||||||||| || || ||||| |||||||| || | |||||
Sbjct 6853 CCCCTTCATGTTGTACAAGGATCACGCCAACCGCAAGAGCAACCAGAAGAACCTTGGCAC 6912
Query 97280 CATCAAGGGCTCCAATCTGTGCACGGAAATTGTAGAGTACGCCTCTCCGGACGAGACGGC 97339
||| ||||||| || ||||| || || | ||||| | |||| || ||| ||
Sbjct 6913 CATTCGCAGCTCCAACCTTTGCACTGAGATCATCGAGTATTCTGCTCCTGATGAGGTTGC 6972
Query 97340 AGTTTGCGTTCTGGCATCGGTCAATCTGCCCAAGTTTGTAGA 97381
|| ||| ||||| || || ||||| |||| || ||
Sbjct 6973 TGTCTGCAACCTGGCGTCTATCGCCCTGCCACAGTTCGTCGA 7014
>seq3478
Length=17986
Score = 127 bits (140), Expect = 3e-24
Identities = 195/278 (70%), Gaps = 0/278 (0%)
Strand=Plus/Plus
Query 125019 ATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTGGACGGTCGAAGAGGTCGATCTG 125078
|||||| |||||||||| ||| |||| ||||| ||||| | || ||| | || |||
Sbjct 7801 ATTTGGCAAATGTACAAGAAGCACGAGGCGTCCTTCTGGACCGCTGAGGAGATTGACCTG 7860
Query 125079 TCCAAGGACCTGTACGATTGGGAGACTCGTTTGACTGAAACTGAGCGAGAGTTTATATCG 125138
|| ||||||||| |||| ||| | | |||||||| || ||| | | || || ||
Sbjct 7861 TCTAAGGACCTGCACGACTGGAACAACCGTTTGACCGATGACGAGAAATACTTCATCTCC 7920
Query 125139 CACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCGTCAACGACAATCTGTTGACACGA 125198
||||| | ||||||||||||| || || || ||||| ||||| || || | ||
Sbjct 7921 CACATCCTCGCCTTCTTTGCCGCTTCGGACGGCATCGTTAACGAAAACTTGATCGAGCGC 7980
Query 125199 TTCTCTCAAGAGTTGACCATTCCAGAGGTGTCGTGCTTTTACGGATTCCAAATCATGATT 125258
||| | ||| | ||||| |||| || || ||||| ||||| | ||||||
Sbjct 7981 TTCAGTGCTGAGGTCCAGATTCCTGAGGCCCGTTGTTTCTACGGCTTCCAGACCATGATG 8040
Query 125259 GAGAACGTGCACTCGGAAATGTACTCTACACTGATTGA 125296
|||||| | ||||| || | |||||| ||||||||
Sbjct 8041 GAGAACATCCACTCCGAGACTTACTCTCTCCTGATTGA 8078
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 740999776315400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |