Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chrysoporthe_20austroafricana_20[genbank_20GCA_5F001051155.1_202015-
07-09] 6,415 sequences; 44,668,886 total letters
Query= NC_005832.1
Length=106332
Score E
Sequences producing significant alignments: (Bits) Value
seq2112 100 2e-16
>seq2112
Length=5501
Score = 100 bits (110), Expect = 2e-16
Identities = 214/315 (68%), Gaps = 10/315 (3%)
Strand=Plus/Minus
Query 25611 CACGTAAAACTG---ACACATGGTGTAGCACGGAGGAAGAGCTATAAGGCCCAAGTCTTT 25667
|||||| ||||| | ||||| | |||||| || || || || | || ||| ||
Sbjct 3941 CACGTAGAACTGCGCAAACATG---TGGCACGGCGGCAGCGCCATGATCTTCAGGTCCTT 3885
Query 25668 AGGGTTCCAGGCGCACACGATGATGCACCTGTCTTCTGGGTT-GTCC-CTGATAAGATCC 25725
|||||||| |||| || |||||| | | ||| | ||||| |||| | | | | |
Sbjct 3884 GGGGTTCCACGCGCTCAGGATGATCCGGCGGTCGTGCGGGTTCGTCCGCAGCTTG--TGC 3827
Query 25726 GCGGTGTTTTGCAGCTGATCCACCCCCATCCCCGAGTAGTCTGCCCTCATGTCCGTGTAC 25785
|| | |||||| || || ||| || | |||||| || | | ||| ||||
Sbjct 3826 ACGACCTCCGCCAGCTGGTCGACGCCCTGGCCGGCGTAGTCCGCGCGCGCGTCGACGTAC 3767
Query 25786 TCTGCTCCGAAATACCTCCACTGGAACCCGTACACCGGTCCTAGGTCTCCATCTTCCCTG 25845
|| || ||||| | || |||||||||||||||||| || || ||||| || || || | |
Sbjct 3766 TCGGCGCCGAAGTGCCGCCACTGGAACCCGTACACGGGGCCGAGGTCGCCCTCCTCGCGG 3707
Query 25846 TGCTCAAAGCCCCTCTTATCCAAAAAGTCTCTGGAACCATTGGCGTCCCAGATCTTTACC 25905
||| | | |||| | |||| || | | || || ||| ||||||||||||| ||
Sbjct 3706 TGCGCCAGGCCCACGCTGTCCAGGAACGCGCGCGAGCCGTTGCCGTCCCAGATCTTGACG 3647
Query 25906 CCCTTCTCGGAGAGC 25920
|||| | || ||||
Sbjct 3646 CCCTGCGCGCTGAGC 3632
Score = 95.1 bits (104), Expect = 8e-15
Identities = 139/193 (72%), Gaps = 3/193 (2%)
Strand=Plus/Minus
Query 25401 GGCTCCCTCTCGAGCTGAGTCTTCAGCGGTTCTACGTGATCCAGGTAGACGTGAGCGTCT 25460
||||||| ||| ||||| ||| |||| || ||||| |||| ||||||||| |||||
Sbjct 4234 GGCTCCCGCTCCAGCTGCGTCCGGAGCGCGTCCACGTGGTCCACGTAGACGTGCGCGTCG 4175
Query 25461 CCCAGAGTGTG-GACAAACTCTCCCGGTTCTAGCCCGGTAACGTAAGCCATCATGTACGT 25519
|||| ||| | || || ||||| | || || |||| || | ||||| |||
Sbjct 4174 CCCATGACGTGCGTCAGGCTG-CCCGGGACGAGGTCGCACACGTGCGCGACCATGTGCGT 4116
Query 25520 GAGGAGAAAGTAGCTGGCGATGTTAAAGGGTACCCCGAACCCCATGTCCCCCCGACCTCT 25579
|| || ||||||||||||||| || || || |||| ||||||| | | |||| ||
Sbjct 4115 CAGCAGCGCGTAGCTGGCGATGTTGAACGGCACGCCGAGGCCCATGT-CGCAGGACCGCT 4057
Query 25580 GGTAGAGCTGACA 25592
|||| ||||| ||
Sbjct 4056 GGTACAGCTGGCA 4044
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 340111007085795
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |