Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chrysoporthe_20austroafricana_20[genbank_20GCA_5F001051155.1_202015- 07-09] 6,415 sequences; 44,668,886 total letters Query= NC_005832.1 Length=106332 Score E Sequences producing significant alignments: (Bits) Value seq2112 100 2e-16 >seq2112 Length=5501 Score = 100 bits (110), Expect = 2e-16 Identities = 214/315 (68%), Gaps = 10/315 (3%) Strand=Plus/Minus Query 25611 CACGTAAAACTG---ACACATGGTGTAGCACGGAGGAAGAGCTATAAGGCCCAAGTCTTT 25667 |||||| ||||| | ||||| | |||||| || || || || | || ||| || Sbjct 3941 CACGTAGAACTGCGCAAACATG---TGGCACGGCGGCAGCGCCATGATCTTCAGGTCCTT 3885 Query 25668 AGGGTTCCAGGCGCACACGATGATGCACCTGTCTTCTGGGTT-GTCC-CTGATAAGATCC 25725 |||||||| |||| || |||||| | | ||| | ||||| |||| | | | | | Sbjct 3884 GGGGTTCCACGCGCTCAGGATGATCCGGCGGTCGTGCGGGTTCGTCCGCAGCTTG--TGC 3827 Query 25726 GCGGTGTTTTGCAGCTGATCCACCCCCATCCCCGAGTAGTCTGCCCTCATGTCCGTGTAC 25785 || | |||||| || || ||| || | |||||| || | | ||| |||| Sbjct 3826 ACGACCTCCGCCAGCTGGTCGACGCCCTGGCCGGCGTAGTCCGCGCGCGCGTCGACGTAC 3767 Query 25786 TCTGCTCCGAAATACCTCCACTGGAACCCGTACACCGGTCCTAGGTCTCCATCTTCCCTG 25845 || || ||||| | || |||||||||||||||||| || || ||||| || || || | | Sbjct 3766 TCGGCGCCGAAGTGCCGCCACTGGAACCCGTACACGGGGCCGAGGTCGCCCTCCTCGCGG 3707 Query 25846 TGCTCAAAGCCCCTCTTATCCAAAAAGTCTCTGGAACCATTGGCGTCCCAGATCTTTACC 25905 ||| | | |||| | |||| || | | || || ||| ||||||||||||| || Sbjct 3706 TGCGCCAGGCCCACGCTGTCCAGGAACGCGCGCGAGCCGTTGCCGTCCCAGATCTTGACG 3647 Query 25906 CCCTTCTCGGAGAGC 25920 |||| | || |||| Sbjct 3646 CCCTGCGCGCTGAGC 3632 Score = 95.1 bits (104), Expect = 8e-15 Identities = 139/193 (72%), Gaps = 3/193 (2%) Strand=Plus/Minus Query 25401 GGCTCCCTCTCGAGCTGAGTCTTCAGCGGTTCTACGTGATCCAGGTAGACGTGAGCGTCT 25460 ||||||| ||| ||||| ||| |||| || ||||| |||| ||||||||| ||||| Sbjct 4234 GGCTCCCGCTCCAGCTGCGTCCGGAGCGCGTCCACGTGGTCCACGTAGACGTGCGCGTCG 4175 Query 25461 CCCAGAGTGTG-GACAAACTCTCCCGGTTCTAGCCCGGTAACGTAAGCCATCATGTACGT 25519 |||| ||| | || || ||||| | || || |||| || | ||||| ||| Sbjct 4174 CCCATGACGTGCGTCAGGCTG-CCCGGGACGAGGTCGCACACGTGCGCGACCATGTGCGT 4116 Query 25520 GAGGAGAAAGTAGCTGGCGATGTTAAAGGGTACCCCGAACCCCATGTCCCCCCGACCTCT 25579 || || ||||||||||||||| || || || |||| ||||||| | | |||| || Sbjct 4115 CAGCAGCGCGTAGCTGGCGATGTTGAACGGCACGCCGAGGCCCATGT-CGCAGGACCGCT 4057 Query 25580 GGTAGAGCTGACA 25592 |||| ||||| || Sbjct 4056 GGTACAGCTGGCA 4044 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 340111007085795