Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chrysoporthe_20austroafricana_20[genbank_20GCA_5F001051155.1_202015- 07-09] 6,415 sequences; 44,668,886 total letters Query= NC_006549.1 Length=140131 Score E Sequences producing significant alignments: (Bits) Value seq2574 93.3 4e-14 seq373 82.4 7e-11 >seq2574 Length=14985 Score = 93.3 bits (102), Expect = 4e-14 Identities = 114/156 (73%), Gaps = 0/156 (0%) Strand=Plus/Plus Query 94852 ATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTT 94911 |||||| ||||| || || | || || | | ||||| || ||||| ||||| || || Sbjct 35 ATCCTCGAGCTGCTTGCCAGCGAAAATCAGGCGCTGCTGGTCCGGAGGGATACCCTCCTT 94 Query 94912 GTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGAT 94971 ||| | || || |||||||| | ||| ||||||| | ||||| |||| ||||| Sbjct 95 GTCCTGGATCTTGGCCTTGACATTGTCGATGGTGTCAGAGGACTCGACCTCAAGAGTGAT 154 Query 94972 GGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 ||| || ||||| || || || || ||||||||||| Sbjct 155 GGTCTTGCCAGTGAGGGTCTTGACGAAGATCTGCAT 190 >seq373 Length=59380 Score = 82.4 bits (90), Expect = 7e-11 Identities = 147/215 (68%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 94793 CGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAA 94852 |||| ||||||||||| || || ||||| || | ||| || || || || | Sbjct 256 CGCAGCACCAAGTGCAGTGTCGACTCCTTCTGGATGTTGTAGTCAGACAGCGTCCGGCCG 197 Query 94853 TCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTG 94912 || |||||||| || || | ||||| | | ||||| ||||| |||||||| || ||| Sbjct 196 TCTTCCAGCTGCTTGCCCGCGAAGATAAGACGCTGCTGGTCTGGGGGAATACCCTCCTTG 137 Query 94913 TCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATG 94972 || | ||| || ||||| ||| | ||| || || | || || || | ||||| Sbjct 136 TCTTGAATCTTGGCCTTCACGTTGTCGATCGTATCCGATGATTCCACCTCGAGGGTGATC 77 Query 94973 GTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 || || || || || || || || ||||| ||||| Sbjct 76 GTCTTGCCCGTCAGGGTCTTGACGAAGATTTGCAT 42 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448255252649400