Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chrysoporthe_20austroafricana_20[genbank_20GCA_5F001051155.1_202015- 07-09] 6,415 sequences; 44,668,886 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq1171 104 4e-18 seq1662 98.7 2e-16 >seq1171 Length=30928 Score = 104 bits (114), Expect = 4e-18 Identities = 85/101 (84%), Gaps = 2/101 (2%) Strand=Plus/Minus Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 || |||||||| || | ||| |||||| || |||||||| || ||||| ||||| || || Sbjct 1634 GCCAAGCGTCACCGGAAGAT-TCTTCGTGACAACATCCAGGGTATCACAAAGCCCGCCAT 1576 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTG 16532 ||| ||||| |||||||||||||| ||||||||| |||||| Sbjct 1575 CCGCCGTCTCGCTCGTCGTGGTGGTGTCAAGCGTATCTCTG 1535 Score = 86.0 bits (94), Expect = 1e-12 Identities = 97/130 (75%), Gaps = 0/130 (0%) Strand=Plus/Minus Query 16570 CTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGAC 16629 |||||| || || |||| |||||| || ||| ||||||||||| || || ||||| Sbjct 1404 CTTCCTGGAGGGTGTCATCCGTGATGCCGTCACCTACACCGAGCACGCCAAGCGCAAGAC 1345 Query 16630 TGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGCCGTAAGATTTATGGTTT 16689 ||||||||| | || |||||||||| |||| || |||||||| | | || ||||| Sbjct 1344 CGTCACCTCCCTCGACGTCGTCTATGCCCTGAAGCGACAAGGCCGCACCCTCTACGGTTT 1285 Query 16690 TGGAAGTTAA 16699 || ||||| Sbjct 1284 CGGTGGTTAA 1275 >seq1662 Length=66124 Score = 98.7 bits (108), Expect = 2e-16 Identities = 84/101 (83%), Gaps = 2/101 (2%) Strand=Plus/Plus Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 || ||||| || || | ||| |||||| || |||||||| || || |||||||| || || Sbjct 23019 GCCAAGCGCCACCGAAAGAT-TCTTCGTGACAACATCCAGGGTATTACCAAGCCCGCCAT 23077 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTG 16532 ||| ||||| |||||||||||||| ||||||||| |||||| Sbjct 23078 CCGACGTCTCGCTCGTCGTGGTGGTGTCAAGCGTATCTCTG 23118 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79069334720595