Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chrysoporthe_20austroafricana_20[genbank_20GCA_5F001051155.1_202015- 07-09] 6,415 sequences; 44,668,886 total letters Query= NC_007151.1 Length=149622 Score E Sequences producing significant alignments: (Bits) Value seq638 96.9 3e-15 >seq638 Length=259535 Score = 96.9 bits (106), Expect = 3e-15 Identities = 419/657 (64%), Gaps = 23/657 (4%) Strand=Plus/Minus Query 148242 CCTTCGGCCTCGTAATTTTCGTAAAGGTCCTCGAATTCTTGGCCATAGCAATCGTTTAAA 148301 || ||| |||||| || ||||| || ||||||| || | ||| ||||| ||| | Sbjct 6780 CCCTCGCGCTCGTACTTCTCGTACAGAGCCTCGAACTCCTCGCCGTAGCAGTCGGCAAGG 6721 Query 148302 CCGGGACACTCGTCGGGGCACATCAATGACCA-TTTCCCTCCTGTCTTTACCCTCTTCAT 148360 ||||| ||||||| ||||||||||| | ||| | || | || ||| ||| | |||||| Sbjct 6720 CCGGGGCACTCGTTGGGGCACATCAGAGTCCAGTCGCCGTTCT-TCTCTACACGCTTCAT 6662 Query 148361 AAACAGATCAGGTGTCCACATGGCAAAAAGAAGATCGCGAGC--------CTTCATATCC 148412 || ||||| || |||| | ||||| | || || ||||| |||| | ||| Sbjct 6661 GAAGAGATCCGGGATCCAGAGGGCAAGGAAGAGGTCACGAGCACGGACCTCTTCCTTTCC 6602 Query 148413 TCGGCACCCATATTGCGCTTTAGATCCaaaaaagtaaaaaCGTCTGCGTGCCAAGGCTCG 148472 || | || ||| || || | || || || || |||||||| ||||| Sbjct 6601 GTGG-----TTCTTCCGC---AGGTCGAGGAACTCGAAGACATCAGCGTGCCATGGCTCC 6550 Query 148473 ATGTATACGGTCATGGCGCC---TTTCCTTTTACCTCCTTGATCGACATGGCGTAGCA-T 148528 | ||| | || | || || | | || || || |||||||| | || ||| | Sbjct 6549 AGGTAGATGGCAAAAGCACCGGGGCGCTTATTGCCACCCTGATCGACGTATCG-GGCAGT 6491 Query 148529 GCTATTAAAAACACGCAATGCAGGTCCCAATCCCGCCGCAGTTCCGTTTGTGGATTCAAT 148588 | | || || |||||||| ||| | || | || ||||| ||| | || Sbjct 6490 GTTGTTGAAGACACGCAACATAGGGATGATGCCATTGGACGTGCCGTTGGTGCCAGCGAT 6431 Query 148589 TTTACTATTGGTGGCGCGAATTTGAGTGACATTCAGGCCGATGCCGCCTCCGTGTTTAGA 148648 | |||||| || || | ||| || || || ||||| || | || || Sbjct 6430 GTAGGAGCCGGTGGCACGGATGCGGTGGACGTTGAGACCAATGCCTCCAGCCATCTTGGA 6371 Query 148649 TATCATGGCACAATCGTTGAGTGTTTTATAGATGCCGTTAATACTGTCCTCTTGAATGTT 148708 ||||||||||| || || || | ||||||||| | ||| |||||||| | |||| Sbjct 6370 GATCATGGCACAGGTCTTCAGGGTATCATAGATGCCCTCAATGCTGTCCTCCTTCATGTC 6311 Query 148709 AAGCAGGTAGCACGATGACATTTGAGGCATTTTCATGCCAGACGAAAATAGAGTTGGACT 148768 || ||| ||||||| |||| || | | | |||| | || || ||||| Sbjct 6310 AACGAGGAAGCACGACGACAACTGCGCCTGAGGCGTGCCGGCATTGAACAGCGTTGGCGA 6251 Query 148769 AGCGTGAGTGAACAGCTTTGCCCGCATCAATCTATAGGATTCGATAGCGCTTTCGATGTC 148828 ||||| ||||| | ||| ||| | | |||| || | | | || ||||||| Sbjct 6250 CGCGTGTGTGAAGAACTTGTTGGACATGTAGTTGTAGGTCTCAAGAACCCTCTCGATGTT 6191 Query 148829 ATCACCATGAATCTGTAGAGCTACACGCATCAGCATGTGTTGAGGCCTCTCGACGAC 148885 || || || | ||| ||||||||||||||||| || |||| ||||||||| Sbjct 6190 GTCCCCCCAGATGCCAACAGCGACACGCATCAGCATGTGCTGTGGCCGCTCGACGAC 6134 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478624017258800