Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chrysoporthe_20austroafricana_20[genbank_20GCA_5F001051155.1_202015-
07-09] 6,415 sequences; 44,668,886 total letters
Query= NC_007151.1
Length=149622
Score E
Sequences producing significant alignments: (Bits) Value
seq638 96.9 3e-15
>seq638
Length=259535
Score = 96.9 bits (106), Expect = 3e-15
Identities = 419/657 (64%), Gaps = 23/657 (4%)
Strand=Plus/Minus
Query 148242 CCTTCGGCCTCGTAATTTTCGTAAAGGTCCTCGAATTCTTGGCCATAGCAATCGTTTAAA 148301
|| ||| |||||| || ||||| || ||||||| || | ||| ||||| ||| |
Sbjct 6780 CCCTCGCGCTCGTACTTCTCGTACAGAGCCTCGAACTCCTCGCCGTAGCAGTCGGCAAGG 6721
Query 148302 CCGGGACACTCGTCGGGGCACATCAATGACCA-TTTCCCTCCTGTCTTTACCCTCTTCAT 148360
||||| ||||||| ||||||||||| | ||| | || | || ||| ||| | ||||||
Sbjct 6720 CCGGGGCACTCGTTGGGGCACATCAGAGTCCAGTCGCCGTTCT-TCTCTACACGCTTCAT 6662
Query 148361 AAACAGATCAGGTGTCCACATGGCAAAAAGAAGATCGCGAGC--------CTTCATATCC 148412
|| ||||| || |||| | ||||| | || || ||||| |||| | |||
Sbjct 6661 GAAGAGATCCGGGATCCAGAGGGCAAGGAAGAGGTCACGAGCACGGACCTCTTCCTTTCC 6602
Query 148413 TCGGCACCCATATTGCGCTTTAGATCCaaaaaagtaaaaaCGTCTGCGTGCCAAGGCTCG 148472
|| | || ||| || || | || || || || |||||||| |||||
Sbjct 6601 GTGG-----TTCTTCCGC---AGGTCGAGGAACTCGAAGACATCAGCGTGCCATGGCTCC 6550
Query 148473 ATGTATACGGTCATGGCGCC---TTTCCTTTTACCTCCTTGATCGACATGGCGTAGCA-T 148528
| ||| | || | || || | | || || || |||||||| | || ||| |
Sbjct 6549 AGGTAGATGGCAAAAGCACCGGGGCGCTTATTGCCACCCTGATCGACGTATCG-GGCAGT 6491
Query 148529 GCTATTAAAAACACGCAATGCAGGTCCCAATCCCGCCGCAGTTCCGTTTGTGGATTCAAT 148588
| | || || |||||||| ||| | || | || ||||| ||| | ||
Sbjct 6490 GTTGTTGAAGACACGCAACATAGGGATGATGCCATTGGACGTGCCGTTGGTGCCAGCGAT 6431
Query 148589 TTTACTATTGGTGGCGCGAATTTGAGTGACATTCAGGCCGATGCCGCCTCCGTGTTTAGA 148648
| |||||| || || | ||| || || || ||||| || | || ||
Sbjct 6430 GTAGGAGCCGGTGGCACGGATGCGGTGGACGTTGAGACCAATGCCTCCAGCCATCTTGGA 6371
Query 148649 TATCATGGCACAATCGTTGAGTGTTTTATAGATGCCGTTAATACTGTCCTCTTGAATGTT 148708
||||||||||| || || || | ||||||||| | ||| |||||||| | ||||
Sbjct 6370 GATCATGGCACAGGTCTTCAGGGTATCATAGATGCCCTCAATGCTGTCCTCCTTCATGTC 6311
Query 148709 AAGCAGGTAGCACGATGACATTTGAGGCATTTTCATGCCAGACGAAAATAGAGTTGGACT 148768
|| ||| ||||||| |||| || | | | |||| | || || |||||
Sbjct 6310 AACGAGGAAGCACGACGACAACTGCGCCTGAGGCGTGCCGGCATTGAACAGCGTTGGCGA 6251
Query 148769 AGCGTGAGTGAACAGCTTTGCCCGCATCAATCTATAGGATTCGATAGCGCTTTCGATGTC 148828
||||| ||||| | ||| ||| | | |||| || | | | || |||||||
Sbjct 6250 CGCGTGTGTGAAGAACTTGTTGGACATGTAGTTGTAGGTCTCAAGAACCCTCTCGATGTT 6191
Query 148829 ATCACCATGAATCTGTAGAGCTACACGCATCAGCATGTGTTGAGGCCTCTCGACGAC 148885
|| || || | ||| ||||||||||||||||| || |||| |||||||||
Sbjct 6190 GTCCCCCCAGATGCCAACAGCGACACGCATCAGCATGTGCTGTGGCCGCTCGACGAC 6134
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 478624017258800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |