Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chrysoporthe_20austroafricana_20[genbank_20GCA_5F001051155.1_202015- 07-09] 6,415 sequences; 44,668,886 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq638 396 7e-105 >seq638 Length=259535 Score = 396 bits (438), Expect = 7e-105 Identities = 1079/1633 (66%), Gaps = 37/1633 (2%) Strand=Plus/Plus Query 363547 TTCACGCACGCCACGCCAACAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCT 363606 ||||| ||||| ||||||| ||| |||||| || || | | | | ||| |||| || Sbjct 6239 TTCACACACGCGTCGCCAACGCTGTTCAATGCCGGCACGCCTCAGGCGCAGTTGTCGTCG 6298 Query 363607 TGCTTTCTTCTAAAAATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAAT 363666 ||||| || | | |||||||| || ||| ||||| |||| ||| || || |||| Sbjct 6299 TGCTTCCTCGTTGACATGAAGGAGGACAGCATTGAGGGCATCTATGATACCCTGAAGACC 6358 Query 363667 TGTGCTCTTATTTCCAAGAATGCAGGCGGAATTGGTGT-ATCGATCCACAATGTTCGTGC 363725 ||||| | || ||||||| || || || |||||| | | || ||||| | ||||| Sbjct 6359 TGTGCCATGATCTCCAAGATGGCTGGAGGCATTGGTCTCAACG-TCCACCGCATCCGTGC 6417 Query 363726 -ACAGAACAGTTACATTCGC-GGCACAGGGGGATACTCGAATGGGCTGGTTCCCATGCTT 363783 || | | ||||| ||| ||||| || || ||||| | | || ||| | Sbjct 6418 CACCGG-CTCCTACAT-CGCTGGCACCAACGGCACGTCCAATGGCATCATCCCTATGTTG 6475 Query 363784 CGTGTGTTTGACAATACTGCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCG 363843 ||||| || |||| ||||| | |||||||| |||||||| |||||| || || Sbjct 6476 CGTGTCTTCAACAACACTGCCCGATACGTCGATCAGGGTGGCAATAAGCGCCCCGGTGCT 6535 Query 363844 TTTGCTATGTATCTCGAGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAA 363903 ||||| || || || ||||| || || ||| | || ||||| || || || ||||| Sbjct 6536 TTTGCCATCTACCTGGAGCCATGGCACGCTGATGTCTTCGAGTTCCTCGACCTGCGGAAG 6595 Query 363904 AACACGGGAAAAGAGGAATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGAC 363963 ||| ||||| || || | ||||| ||||| || ||| ||| || ||| | | || Sbjct 6596 AACCACGGAAAGGAAGAGGTCCGTGCTCGTGACCTCTTCCTTGCCCTCTGGATCCCGGAT 6655 Query 363964 CATTTTATGAAGCGCGTGGAGGCAGGTAAGA--ATTGGTCACTCTTTTGCCCACACGAAT 364021 | || |||||||| || ||| | | | | | ||| | || | ||||| |||| | Sbjct 6656 CTCTTCATGAAGCGTGTAGAG--AAGAACGGCGACTGGACTCTGATGTGCCCCAACGAGT 6713 Query 364022 GTCCAGGTCTTTCCGATGTATGGGGTGACGACTATGTTGCTCTATACGAAAAGTATGAAT 364081 | || || ||| |||| | || || || | | ||||| ||||| ||||| || Sbjct 6714 GCCCCGGCCTTGCCGACTGCTACGGCGAGGAGTTCGAGGCTCTGTACGAGAAGTACGAGC 6773 Query 364082 CGGAGGGAAAGGCTCGTAAGACAATTCCCGCACAGAAGCTATGGTTTGCCATCATGGATT 364141 ||||| | | ||||| | || |||||||| |||| ||||||| | || Sbjct 6774 GCGAGGGTCGCGGCCAAAAGACCCTGAAGGCGCAGAAGCTCTGGTATGCCATCCTCGAGG 6833 Query 364142 CGCAGATTGAGACAGGAACACCCTATATGTTGTACAAAGATTCGTGCAACCGCAAGTCCA 364201 | || | |||||||| | |||| ||||||||||| ||| |||||||||| || Sbjct 6834 CTCAAACCGAGACAGGCAACCCCTTCATGTTGTACAAGGATCACGCCAACCGCAAGAGCA 6893 Query 364202 ACCAGCAGCACCTTGGTACAATTCAGCAG-AGCAACCTATGTACCGAGATTATTGAATAC 364260 ||||| || ||||||| || |||| |||| |||||| || || ||||| || || || Sbjct 6894 ACCAGAAGAACCTTGGCACCATTC-GCAGCTCCAACCTTTGCACTGAGATCATCGAGTAT 6952 Query 364261 ACCGCTCCCGACGAGACTGCCGTATGTAACCTTGCGTCGATCGCGCTTCCGGCGTTTG-- 364318 | ||||| || ||| ||| || || ||||| ||||| ||||| || || ||| | Sbjct 6953 TCTGCTCCTGATGAGGTTGCTGTCTGCAACCTGGCGTCTATCGCCCTGCCACAGTTCGTC 7012 Query 364319 ---TAAAAG-ATGGTACTTTTGACCACCAGCATCTTTATGACGTAACCTA--TCATGCTA 364372 || || ||| | | || |||| || |||| || ||| | || | | Sbjct 7013 GACTACGAGAATGAGCGCTATAACTTCCAGTTGCTGCATGAAGTCACCCAGGTCGTCGT- 7071 Query 364373 CTTGCAATCTCGACAAGGTTATCGACAAGAATTATTATCCAATTCCTGAAGCC-----GA 364427 | |||| || ||||| | ||||| | || | ||||| |||| || ||| || Sbjct 7072 -TCGCAACCTGAACAAGATCATCGATATCAACCACTATCCTGTTCCGGAGGCCCGCAAGA 7130 Query 364428 GCGTTCTAATATGCGTCATCGCCCGATTGGTCTTGGTGTACAGGGCCTCGCTGACGTTTT 364487 || || ||||| || || || ||||| | || || ||||| || || || | ||| Sbjct 7131 GC-----AACATGCGCCACCGTCCTATTGGCGTGGGCGTCCAGGGTCTGGCCGATGCTTT 7185 Query 364488 TATGATGCTCAAGATGGCATTTGATTCGCCTGACGCTCGTGTTCTAAATAAGGAGATCTT 364547 || ||| ||| | || || || ||||| ||||||| || || ||| ||||||| Sbjct 7186 CTTGGCCCTCCGCATGCCTTTCGAGTCACCTGAGGCTCGTGAGCTGAACAAGCAGATCTT 7245 Query 364548 TGAAACAATGTATTTTGCCGCAATGACTGCTTCGTGTGATTTGGCAAAAACCAAGGGAAA 364607 || || || || ||||| | || || |||||||| | || || | || Sbjct 7246 CGAGACCATCTACCACGCCGCCCTCACCGCATCGTGTGACATTGCCAAGGTTGATGGCCC 7305 Query 364608 GTACTCTACTTATGAGGGGTCCCCTCTTTCGCAGGGAAAATTCCAGTTTGATCTATGG-- 364665 ||||| | || ||||| || || | || ||||| | | |||| || | ||| Sbjct 7306 CTACTCATCATACGAGGGATCTCCCGTCTCCCAGGGTATCCTGCAGTACGACATGTGGAA 7365 Query 364666 -AATGTCACGCCATCTGTCCGATGGAACTGGGATACGCTACGTTCCAACGTTAAGAAGCA 364724 ||||||| ||| |||| | ||| ||||||| | | |||| | ||| |||| Sbjct 7366 CAATGTCAAGCCCTCTGATCTCTGGGACTGGGACGCCTTGAAGGCCAAGATCAAGCAGCA 7425 Query 364725 TGGTACTCGCAACTCCCTCGTTACAGCGCCCATGCCCACGGCTTCTACTGCACAGATCCT 364784 ||| |||||| | | | | |||||||||||||| || || ||| | |||||||| Sbjct 7426 CGGTGTCCGCAACAGCTTGTTGATGGCGCCCATGCCCACTGCCTCGACTTCGCAGATCCT 7485 Query 364785 CGGAAACAACGAGTGCTTCGAACCGTTTACAAGCAATCTTTATTCACGCCGGGTTCTTTC 364844 || |||||||||||||| || || | |||| ||| | ||| ||||| || || | Sbjct 7486 GGGCAACAACGAGTGCTTTGAGCCCTATACATCCAACATCTATCAGCGCCGCGTGCTCGC 7545 Query 364845 CGGAGAATTTCCGGTAGTTAATAAGTACCTAGTCAAGGATCTTTCCGACCGCGGGCTGTG 364904 || || || | || || ||| | || |||||||||| | | || ||||| Sbjct 7546 TGGCGAGTTCCAAGTTGTCAATCCATGGCTGCTCAAGGATCTGGTGCAGTGTGGTCTGTG 7605 Query 364905 GGGTGACAGCATGAAGAACTATATCATCGCCGCTAATGGTTCTGTGCAGAACATTC-CAG 364963 | ||| | |||||||| |||||||| | |||| ||| | ||||| |||| ||| Sbjct 7606 GTCTGAGGACCTGAAGAACCGCATCATCGCTGAGGATGGCTCTATCCAGAATATTCGCAG 7665 Query 364964 GATTTCCAGAAGATCTGAAGCCTATTTACAAAACCGTATGGGAAATTTCCATGCGAACTC 365023 | | ||||| || | ||| | | ||||| ||||| ||||| || || | | || Sbjct 7666 CA-TCCCAGATGACATCAAGGCCCTCTACAAGACCGTCTGGGAGATCTCGCAGAGGACCA 7724 Query 365024 TCATTGATATGGCGGCCGATCGCGGTGCTTTTATCTGTCAGAGCCAGTCGTTTAACGTAT 365083 || | | ||||| |||||||| ||||| || ||| ||| ||||||| | ||| || Sbjct 7725 TCGTGCAGATGGCTGCCGATCGTGGTGCCTTCATCGACCAGTCCCAGTCGCTGAACATAC 7784 Query 365084 TCATGACTCAGCCAACCTCCGCCAAGCTTACATCCATGCATTTCTACGGGTGGAAATCCG 365143 |||| | |||| | | |||| | || |||||| ||| ||| ||||| | Sbjct 7785 ACATGCGTGAGCCTTCTATGGGCAAGATCACTAGCATGCACTTCACCGGTTGGAAGCTGG 7844 Query 365144 GTCTTAAGACAGG 365156 |||| ||||| || Sbjct 7845 GTCTCAAGACTGG 7857 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303246474516530