Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chrysoporthe_20austroafricana_20[genbank_20GCA_5F001051155.1_202015-
07-09] 6,415 sequences; 44,668,886 total letters
Query= NC_008291.1
Length=198050
Score E
Sequences producing significant alignments: (Bits) Value
seq638 154 2e-32
seq3478 116 5e-21
>seq638
Length=259535
Score = 154 bits (170), Expect = 2e-32
Identities = 395/596 (66%), Gaps = 14/596 (2%)
Strand=Plus/Minus
Query 63020 AGTCCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTC 63079
|| || || || || | || ||||||| | ||| || |||| | || || || |||
Sbjct 6723 AGGCCGGGGCACTCGTTGGGGCACATCAGAGTCCAGTCGCCGTTCTTCTCTACACGCTTC 6664
Query 63080 ATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTTT 63139
|| |||||||| || ||||| || || | || || || | | | || || |||
Sbjct 6663 ATGAAGAGATCCGGGATCCAGAGGGCAAGGAAGAGGTCACGAGCACGGACCTCTTCCTTT 6604
Query 63140 CCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTAT 63199
|| ||||| || ||||||||| | | | ||||| ||||| || |||| |||
Sbjct 6603 CCGTGGTTCTTCCGCAGGTCGAGGAACTCGAAGACATCAGCGTGCCATGGCTCCAGGTAG 6544
Query 63200 ATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTA 63259
||||| | | | || || || || || || |||||||| | ||||| || ||||| ||
Sbjct 6543 ATGGCAAAAGCACCGGGGCGCTTATTGCCACCCTGATCGACGTATCGGGCAGTGTTGTTG 6484
Query 63260 TAAACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCTGAGATATAGCTT 63319
| || | |||||| || || || |||||||| || || ||||| || | ||| |||
Sbjct 6483 AAGACACGCAACATAGGGATGATGCCATTGGACGTGCCGTTGGTGCCAGCGATGTAGGAG 6424
Query 63320 CCACTGGCACGAATATTACTAA--TTGATAGACCTATTCCCCCTGCCATTTTAGAGATTA 63377
|| ||||||| || | |||| |||| || || || ||||| || ||||| |
Sbjct 6423 CCGGTGGCACGGATGCGGTGGACGTTGA--GACCAATGCCTCCAGCCATCTTGGAGATCA 6366
Query 63378 ATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTA 63437
|| || || | ||||||||||||||||| || || || ||| |||||| || |
Sbjct 6365 TGGCACAGGTCTTCAGGGTATCATAGATGCCCTCAATGCTGTCCTCCTTCATGTCAACGA 6306
Query 63438 GAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGT 63497
| || || |||| || || || || ||||| || | || || || ||||
Sbjct 6305 GGAAGCACGACGACAACTGCGCCTGAGGCGTGCCGGCATTGAACAGCGTTGGCGACGCGT 6246
Query 63498 GAGTAAACCATTTTTCAGA-AAGTAGATTGTACGTCTCAATAGCTGAGTCTATAT----C 63552
| || || | || | || | |||| ||||| ||||||| | | || || | |
Sbjct 6245 GTGTGAAGAACTTGTTGGACATGTAG-TTGTAGGTCTCAAGAACCCTCTCGATGTTGTCC 6187
Query 63553 CCATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGA 63608
|| |||| || || ||||||||||| | ||||||||| || | || ||||
Sbjct 6186 CCCCAGATG----CCAACAGCGACACGCATCAGCATGTGCTGTGGCCGCTCGACGA 6135
>seq3478
Length=17986
Score = 116 bits (128), Expect = 5e-21
Identities = 157/218 (72%), Gaps = 3/218 (1%)
Strand=Plus/Minus
Query 32652 AACATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAA 32711
|||| ||| || ||||| || ||| ||||||||||| | | || | |||||||||
Sbjct 8423 AACAGCAAGCAGGCGAAGTCAGTGTGCAGACCCTCGTCACGAGAGATGAGTTCGTTGGAG 8364
Query 32712 AACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCA 32771
|| || || || ||||| || |||||||| || ||||| || ||||| || || | |||
Sbjct 8363 AAGGTCAGGCCAGGCATCAGACCACGCTTCTTCAGCCAGAAGATGGAAGCGAAAGCGCCA 8304
Query 32772 GAAAAGAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATA---ACCGGCG 32828
|||||||| ||||| || || ||||| |||| ||| | || | || | |
Sbjct 8303 CTGAAGAAAATACCTTCGACAGCAGCAAATGCAACAAGGCGCTGAGCGTAGGTAGACTCA 8244
Query 32829 CTGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTT 32866
| ||| || |||||| | ||||||| |||||||||||
Sbjct 8243 CGGTCCTGGATCCACCTCAGAGCCCAGTCGGCCTTCTT 8206
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 633581190634000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |