Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chrysoporthe_20austroafricana_20[genbank_20GCA_5F001051155.1_202015-
07-09] 6,415 sequences; 44,668,886 total letters
Query= NC_008724.1
Length=288047
Score E
Sequences producing significant alignments: (Bits) Value
seq1214 187 5e-42
seq373 176 8e-39
seq2574 145 1e-29
seq6049 134 3e-26
seq596 114 2e-20
seq1612 109 1e-18
seq4397 86.0 1e-11
>seq1214
Length=170273
Score = 187 bits (206), Expect = 5e-42
Identities = 180/231 (78%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294
|| || || ||||||| |||| ||| || |||||||| || |||||||| || ||||||
Sbjct 100661 CCACCACGCAGGCGCAGGACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAG 100720
Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354
|| || | || || || | |||||| || ||||| || || | |||||||| || |||
Sbjct 100721 AGGGTACGGCCGTCCTCGAGCTGCTTGCCAGCGAAGATCAGGCGCTGTTGGTCTGGGGGA 100780
Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414
|| || |||||||| || ||||| |||||||| ||||||||||| | || || ||
Sbjct 100781 ATACCCTCCTTGTCCTGGATCTTGGCCTTGACATTGTCGATGGTGTCGGAAGACTCCACC 100840
Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCATTATG 68465
|| | |||||| || || |||||||||||||||||||| |||||||| |||
Sbjct 100841 TCAAGGGTGATAGTCTTGCCCGTGAGGGTCTTGACGAAGATCTGCATGATG 100891
>seq373
Length=59380
Score = 176 bits (194), Expect = 8e-39
Identities = 175/227 (77%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294
|| || || || |||| |||||||| || || ||||| || |||||||| || || ||
Sbjct 268 CCACCACGCAGACGCAGCACCAAGTGCAGTGTCGACTCCTTCTGGATGTTGTAGTCAGAC 209
Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354
|| |||| || ||||| | |||||| || ||||| || || | || ||||| || |||
Sbjct 208 AGCGTCCGGCCGTCTTCCAGCTGCTTGCCCGCGAAGATAAGACGCTGCTGGTCTGGGGGA 149
Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414
|| || ||||||||||||||||| ||||| ||| ||||| || || | |||||| ||
Sbjct 148 ATACCCTCCTTGTCTTGAATCTTGGCCTTCACGTTGTCGATCGTATCCGATGATTCCACC 89
Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|| | |||||| || || ||||| |||||||||||||| || |||||
Sbjct 88 TCGAGGGTGATCGTCTTGCCCGTCAGGGTCTTGACGAAGATTTGCAT 42
>seq2574
Length=14985
Score = 145 bits (160), Expect = 1e-29
Identities = 145/188 (77%), Gaps = 0/188 (0%)
Strand=Plus/Plus
Query 68274 TTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATG 68333
|| |||||||| || |||||||| || | ||||| || | |||||| || ||||| ||
Sbjct 3 TTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCCTCGAGCTGCTTGCCAGCGAAAATC 62
Query 68334 AGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCG 68393
|| | || ||||| || || || || |||||||| || ||||| |||||||| |||
Sbjct 63 AGGCGCTGCTGGTCCGGAGGGATACCCTCCTTGTCCTGGATCTTGGCCTTGACATTGTCG 122
Query 68394 ATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAAT 68453
|||||||| | || || || || | |||||||| || || |||||||||||||||||
Sbjct 123 ATGGTGTCAGAGGACTCGACCTCAAGAGTGATGGTCTTGCCAGTGAGGGTCTTGACGAAG 182
Query 68454 ATCTGCAT 68461
||||||||
Sbjct 183 ATCTGCAT 190
>seq6049
Length=106314
Score = 134 bits (148), Expect = 3e-26
Identities = 137/179 (77%), Gaps = 0/179 (0%)
Strand=Plus/Plus
Query 68274 TTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATG 68333
|| |||||||| || ||||| || || | ||||| || | |||||| |||||||| ||
Sbjct 70152 TTCTGGATGTTGTAGTCGGAAAGAGTGCGGCCATCCTCAAGCTGCTTGCCGGCGAAGATC 70211
Query 68334 AGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCG 68393
| || ||||| || || || || || |||||||| || ||||| ||||||||| |||
Sbjct 70212 AATCGCTGTTGATCCGGAGGGATACCCTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCG 70271
Query 68394 ATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAA 68452
|||||||| | || || || || | |||||| || || ||||| |||||||| |||||
Sbjct 70272 ATGGTGTCGGAAGACTCCACCTCAAGGGTGATAGTCTTGCCCGTCAGGGTCTTCACGAA 70330
>seq596
Length=232321
Score = 114 bits (126), Expect = 2e-20
Identities = 435/670 (65%), Gaps = 37/670 (6%)
Strand=Plus/Plus
Query 224981 CGCCACTGGATGTACTGGTTGGGGGTCATGTCCAGGTGGTTCTCAATATGGTGGAAAGCA 225040
||||| || ||||||| || ||| ||||||||||||| || || ||| |||||
Sbjct 206448 CGCCATTGAATGTACTCCGAAGGCGTCTTGTCCAGGTGGTTATCGATGTGGGCAAAAGCG 206507
Query 225041 TGCTGGGCTACGTACGCCATGCGCATGTTGGGATGCTTCCACA-CAGAGCCCCGAGTCGG 225099
||||| | |||||| || || ||||| ||| ||| | | | || || ||
Sbjct 206508 TGCTGCTTGATGTACGCAATACGGATGTTCTCGTGCGACCAGATCTCACCCTCGGTGGGG 206567
Query 225100 TTGTGCCTCGCCGGTGAGGACCTTGATGAGCGTAGTCTTGCCCGCACCATTGGGGCCAAT 225159
| || || ||| ||| || |||| || |||| ||||| ||||| ||||| || ||
Sbjct 206568 ATCAGC-TCACCGCAGAGAACGTTGACCAGGGTAGATTTGCCGGCACCGTTGGGACCGAT 206626
Query 225160 CACGCCAATCCGGGATGACATTGCAACCTGCGAGTTCACGTTGCTGAAGATCTCAGG--- 225216
||| |||| ||||| || | ||| || | | || | ||| |||| |||
Sbjct 206627 GACGGCAATACGGGAGCCCAGGGAGCACTGGAAGGTGATGT--CCGAA-ATCTGAGGCTT 206683
Query 225217 --GCCAGTTTGG-TAAGCAAAGGCCAC------GCCACGCAGCTTCATGATGGCACGGTC 225267
| ||| || || ||| ||| | ||||||| |||||| | |
Sbjct 206684 GGGGGTGTTGGGGTACTGGAAGCCCATCTTGTTGGCACGCAG------GATGGCCTTGGC 206737
Query 225268 CTTGGAAGTAATACCCTCCAGGAACCCGGGCTCGGGGAACTCCCACTTGGTCACCGCGTC 225327
||||| | | ||| || ||||| || ||||| ||||| ||| || | | |
Sbjct 206738 CTTGGTCTTGACACCATCGAGGAAACCAGGCTCAGGGAAGGAGAACTCCATCTCGGATGC 206797
Query 225328 CTTCAGGTCGTAGTAAGATGCAGCCTCGGGTCGCTTTGCC--ACGAAAGCAGACAGGTTT 225385
||| ||| |||| || || |||| | | |||| ||||| | ||||||
Sbjct 206798 GCCCAGCTCGAAGTACGACTTGGCAGCGGG--GTTCTGCCTCACGAAGTCCTCCAGGTTG 206855
Query 225386 CCGAGGTGCTTCGTGAGCTTGAGGTTCTTCTCGTAATGAACAATTGCCGAGCACACTGCG 225445
|| || | || ||||||||| | || |||| | || || | |||||| |
Sbjct 206856 CCCTTGTACGTCTTGAGCTTGAAGCGCT---CGTAGTTGACGATGTACTGGCACACGCGG 206912
Query 225446 TCAAGGAAGCCAGAGTCGTGGGACACAATGATGGACGA-CACGTTCGTCAGGCCCTTGAG 225504
| ||||| ||||||||||| || || |||||||||| || || | | ||||||
Sbjct 206913 TTCAGGAAACCAGAGTCGTGAGAGACCATGATGGACGTGCATGTGCT----GTTCTTGAG 206968
Query 225505 GTGCGTGAT-GAGCCATGCCACGTTGCTGACGTCCATGTGGTTTGTAGGTTCGTCCAGAA 225563
|| || | |||||| |||||||| |||| |||| |||||| || || |||||||| |
Sbjct 206969 GTA-GTCCTCGAGCCAGGCCACGTTCTTGACATCCAAGTGGTTGGTGGGCTCGTCCAGCA 207027
Query 225564 GCAGGATGTCAGCATCAATGAGGATGGCGCGCGTGAGAGACAGCTTCATTTTCCAGCCCC 225623
|||| || || | | || || ||| || |||| ||||||||| ||||| || |
Sbjct 207028 GCAGAATATCGGGGTTCTCGAAGACGGCACGGCACAGAGCCAGCTTCATCTTCCAACCAC 207087
Query 225624 CGGACAGGGA 225633
||||||||||
Sbjct 207088 CGGACAGGGA 207097
>seq1612
Length=127997
Score = 109 bits (120), Expect = 1e-18
Identities = 189/268 (71%), Gaps = 5/268 (2%)
Strand=Plus/Plus
Query 275303 GGTTTCAATATC-TCGTGCGCGACAACCGGCCGCATATGAAGAAGGCCGGCAACCTCCGG 275361
||||||||| | | ||||| || | || || | |||||||||| || |||||||||
Sbjct 44536 GGTTTCAATTACATTGTGCGGGATGATCGACCTCGATTGAAGAAGGCAGGTAACCTCCGG 44595
Query 275362 TCCGCCTTTACCAAGACAGACGGCGAATTCTTTGTCATCTTTGACGCCGACTTCTGCCCA 275421
| || ||||| |||||| || || || ||||||||||||||||| |||||||| ||
Sbjct 44596 TGGGCATTTACACGGACAGATGGAGATTTTTTTGTCATCTTTGACGCAGACTTCTGTCCT 44655
Query 275422 AGGCCCGACTTCCTCGAGGAGACACTTGGC-AGGATGAAGGCAGATCCCACGATTGCCAT 275480
| || |||||| || | ||| | | | || | | | ||| || ||| |||||
Sbjct 44656 CGACCAGACTTCATCAAAGAGCTTATCGTCGAGCACCTTGAC-GATGACAAGATCGCCAT 44714
Query 275481 CTTCCAAACTCCCCAGTTCTTCGAGCAGCGCA-ATGAGCAGAACTACGTGGAGAAGGGAG 275539
|||| | ||| ||||| ||| | | || ||||||||| | || ||| |||| |
Sbjct 44715 TGTCCAGAGTCCACAGTTTTTC-CGTGTCACAGATGAGCAGACGTGGGTTGAGCAGGGGG 44773
Query 275540 CCGGCGCCGTCCAGGAGCTCTTCTATCG 275567
|||| || || ||||||||||| ||
Sbjct 44774 CCGGTGCTACGCAAGAGCTCTTCTACCG 44801
>seq4397
Length=44488
Score = 86.0 bits (94), Expect = 1e-11
Identities = 128/182 (70%), Gaps = 0/182 (0%)
Strand=Plus/Minus
Query 224978 TACCGCCACTGGATGTACTGGTTGGGGGTCATGTCCAGGTGGTTCTCAATATGGTGGAAA 225037
|| |||||||| | |||||||||||| ||| | |||||||| |||| | || | |
Sbjct 8176 TAGCGCCACTGCAGGTACTGGTTGGGCGTCTTCTCCAGGTGCATCTCGACGTGTTCCAGG 8117
Query 225038 GCATGCTGGGCTACGTACGCCATGCGCATGTTGGGATGCTTCCACACAGAGCCCCGAGTC 225097
|| ||||| | ||| | || |||| ||||| |||||| || || | |
Sbjct 8116 GCGTGCTGCTTGATGTATCCGATACGCAGATTGGGGTGCTTCTCGACCTTTCCGGTACTT 8057
Query 225098 GGTTGTGCCTCGCCGGTGAGGACCTTGATGAGCGTAGTCTTGCCCGCACCATTGGGGCCA 225157
|| | |||||||||||| | ||||||||| || | |||||| ||||| ||||| |||
Sbjct 8056 GGGATGGTCTCGCCGGTGAGCAGCTTGATGAGAGTCGACTTGCCAGCACCGTTGGGACCA 7997
Query 225158 AT 225159
||
Sbjct 7996 AT 7995
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 921548497403800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |