Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chrysoporthe_20austroafricana_20[genbank_20GCA_5F001051155.1_202015- 07-09] 6,415 sequences; 44,668,886 total letters Query= NC_008724.1 Length=288047 Score E Sequences producing significant alignments: (Bits) Value seq1214 187 5e-42 seq373 176 8e-39 seq2574 145 1e-29 seq6049 134 3e-26 seq596 114 2e-20 seq1612 109 1e-18 seq4397 86.0 1e-11 >seq1214 Length=170273 Score = 187 bits (206), Expect = 5e-42 Identities = 180/231 (78%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || || ||||||| |||| ||| || |||||||| || |||||||| || |||||| Sbjct 100661 CCACCACGCAGGCGCAGGACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAG 100720 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | || || || | |||||| || ||||| || || | |||||||| || ||| Sbjct 100721 AGGGTACGGCCGTCCTCGAGCTGCTTGCCAGCGAAGATCAGGCGCTGTTGGTCTGGGGGA 100780 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 || || |||||||| || ||||| |||||||| ||||||||||| | || || || Sbjct 100781 ATACCCTCCTTGTCCTGGATCTTGGCCTTGACATTGTCGATGGTGTCGGAAGACTCCACC 100840 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCATTATG 68465 || | |||||| || || |||||||||||||||||||| |||||||| ||| Sbjct 100841 TCAAGGGTGATAGTCTTGCCCGTGAGGGTCTTGACGAAGATCTGCATGATG 100891 >seq373 Length=59380 Score = 176 bits (194), Expect = 8e-39 Identities = 175/227 (77%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || || || |||| |||||||| || || ||||| || |||||||| || || || Sbjct 268 CCACCACGCAGACGCAGCACCAAGTGCAGTGTCGACTCCTTCTGGATGTTGTAGTCAGAC 209 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || |||| || ||||| | |||||| || ||||| || || | || ||||| || ||| Sbjct 208 AGCGTCCGGCCGTCTTCCAGCTGCTTGCCCGCGAAGATAAGACGCTGCTGGTCTGGGGGA 149 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 || || ||||||||||||||||| ||||| ||| ||||| || || | |||||| || Sbjct 148 ATACCCTCCTTGTCTTGAATCTTGGCCTTCACGTTGTCGATCGTATCCGATGATTCCACC 89 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || | |||||| || || ||||| |||||||||||||| || ||||| Sbjct 88 TCGAGGGTGATCGTCTTGCCCGTCAGGGTCTTGACGAAGATTTGCAT 42 >seq2574 Length=14985 Score = 145 bits (160), Expect = 1e-29 Identities = 145/188 (77%), Gaps = 0/188 (0%) Strand=Plus/Plus Query 68274 TTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATG 68333 || |||||||| || |||||||| || | ||||| || | |||||| || ||||| || Sbjct 3 TTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCCTCGAGCTGCTTGCCAGCGAAAATC 62 Query 68334 AGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCG 68393 || | || ||||| || || || || |||||||| || ||||| |||||||| ||| Sbjct 63 AGGCGCTGCTGGTCCGGAGGGATACCCTCCTTGTCCTGGATCTTGGCCTTGACATTGTCG 122 Query 68394 ATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAAT 68453 |||||||| | || || || || | |||||||| || || ||||||||||||||||| Sbjct 123 ATGGTGTCAGAGGACTCGACCTCAAGAGTGATGGTCTTGCCAGTGAGGGTCTTGACGAAG 182 Query 68454 ATCTGCAT 68461 |||||||| Sbjct 183 ATCTGCAT 190 >seq6049 Length=106314 Score = 134 bits (148), Expect = 3e-26 Identities = 137/179 (77%), Gaps = 0/179 (0%) Strand=Plus/Plus Query 68274 TTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATG 68333 || |||||||| || ||||| || || | ||||| || | |||||| |||||||| || Sbjct 70152 TTCTGGATGTTGTAGTCGGAAAGAGTGCGGCCATCCTCAAGCTGCTTGCCGGCGAAGATC 70211 Query 68334 AGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCG 68393 | || ||||| || || || || || |||||||| || ||||| ||||||||| ||| Sbjct 70212 AATCGCTGTTGATCCGGAGGGATACCCTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCG 70271 Query 68394 ATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAA 68452 |||||||| | || || || || | |||||| || || ||||| |||||||| ||||| Sbjct 70272 ATGGTGTCGGAAGACTCCACCTCAAGGGTGATAGTCTTGCCCGTCAGGGTCTTCACGAA 70330 >seq596 Length=232321 Score = 114 bits (126), Expect = 2e-20 Identities = 435/670 (65%), Gaps = 37/670 (6%) Strand=Plus/Plus Query 224981 CGCCACTGGATGTACTGGTTGGGGGTCATGTCCAGGTGGTTCTCAATATGGTGGAAAGCA 225040 ||||| || ||||||| || ||| ||||||||||||| || || ||| ||||| Sbjct 206448 CGCCATTGAATGTACTCCGAAGGCGTCTTGTCCAGGTGGTTATCGATGTGGGCAAAAGCG 206507 Query 225041 TGCTGGGCTACGTACGCCATGCGCATGTTGGGATGCTTCCACA-CAGAGCCCCGAGTCGG 225099 ||||| | |||||| || || ||||| ||| ||| | | | || || || Sbjct 206508 TGCTGCTTGATGTACGCAATACGGATGTTCTCGTGCGACCAGATCTCACCCTCGGTGGGG 206567 Query 225100 TTGTGCCTCGCCGGTGAGGACCTTGATGAGCGTAGTCTTGCCCGCACCATTGGGGCCAAT 225159 | || || ||| ||| || |||| || |||| ||||| ||||| ||||| || || Sbjct 206568 ATCAGC-TCACCGCAGAGAACGTTGACCAGGGTAGATTTGCCGGCACCGTTGGGACCGAT 206626 Query 225160 CACGCCAATCCGGGATGACATTGCAACCTGCGAGTTCACGTTGCTGAAGATCTCAGG--- 225216 ||| |||| ||||| || | ||| || | | || | ||| |||| ||| Sbjct 206627 GACGGCAATACGGGAGCCCAGGGAGCACTGGAAGGTGATGT--CCGAA-ATCTGAGGCTT 206683 Query 225217 --GCCAGTTTGG-TAAGCAAAGGCCAC------GCCACGCAGCTTCATGATGGCACGGTC 225267 | ||| || || ||| ||| | ||||||| |||||| | | Sbjct 206684 GGGGGTGTTGGGGTACTGGAAGCCCATCTTGTTGGCACGCAG------GATGGCCTTGGC 206737 Query 225268 CTTGGAAGTAATACCCTCCAGGAACCCGGGCTCGGGGAACTCCCACTTGGTCACCGCGTC 225327 ||||| | | ||| || ||||| || ||||| ||||| ||| || | | | Sbjct 206738 CTTGGTCTTGACACCATCGAGGAAACCAGGCTCAGGGAAGGAGAACTCCATCTCGGATGC 206797 Query 225328 CTTCAGGTCGTAGTAAGATGCAGCCTCGGGTCGCTTTGCC--ACGAAAGCAGACAGGTTT 225385 ||| ||| |||| || || |||| | | |||| ||||| | |||||| Sbjct 206798 GCCCAGCTCGAAGTACGACTTGGCAGCGGG--GTTCTGCCTCACGAAGTCCTCCAGGTTG 206855 Query 225386 CCGAGGTGCTTCGTGAGCTTGAGGTTCTTCTCGTAATGAACAATTGCCGAGCACACTGCG 225445 || || | || ||||||||| | || |||| | || || | |||||| | Sbjct 206856 CCCTTGTACGTCTTGAGCTTGAAGCGCT---CGTAGTTGACGATGTACTGGCACACGCGG 206912 Query 225446 TCAAGGAAGCCAGAGTCGTGGGACACAATGATGGACGA-CACGTTCGTCAGGCCCTTGAG 225504 | ||||| ||||||||||| || || |||||||||| || || | | |||||| Sbjct 206913 TTCAGGAAACCAGAGTCGTGAGAGACCATGATGGACGTGCATGTGCT----GTTCTTGAG 206968 Query 225505 GTGCGTGAT-GAGCCATGCCACGTTGCTGACGTCCATGTGGTTTGTAGGTTCGTCCAGAA 225563 || || | |||||| |||||||| |||| |||| |||||| || || |||||||| | Sbjct 206969 GTA-GTCCTCGAGCCAGGCCACGTTCTTGACATCCAAGTGGTTGGTGGGCTCGTCCAGCA 207027 Query 225564 GCAGGATGTCAGCATCAATGAGGATGGCGCGCGTGAGAGACAGCTTCATTTTCCAGCCCC 225623 |||| || || | | || || ||| || |||| ||||||||| ||||| || | Sbjct 207028 GCAGAATATCGGGGTTCTCGAAGACGGCACGGCACAGAGCCAGCTTCATCTTCCAACCAC 207087 Query 225624 CGGACAGGGA 225633 |||||||||| Sbjct 207088 CGGACAGGGA 207097 >seq1612 Length=127997 Score = 109 bits (120), Expect = 1e-18 Identities = 189/268 (71%), Gaps = 5/268 (2%) Strand=Plus/Plus Query 275303 GGTTTCAATATC-TCGTGCGCGACAACCGGCCGCATATGAAGAAGGCCGGCAACCTCCGG 275361 ||||||||| | | ||||| || | || || | |||||||||| || ||||||||| Sbjct 44536 GGTTTCAATTACATTGTGCGGGATGATCGACCTCGATTGAAGAAGGCAGGTAACCTCCGG 44595 Query 275362 TCCGCCTTTACCAAGACAGACGGCGAATTCTTTGTCATCTTTGACGCCGACTTCTGCCCA 275421 | || ||||| |||||| || || || ||||||||||||||||| |||||||| || Sbjct 44596 TGGGCATTTACACGGACAGATGGAGATTTTTTTGTCATCTTTGACGCAGACTTCTGTCCT 44655 Query 275422 AGGCCCGACTTCCTCGAGGAGACACTTGGC-AGGATGAAGGCAGATCCCACGATTGCCAT 275480 | || |||||| || | ||| | | | || | | | ||| || ||| ||||| Sbjct 44656 CGACCAGACTTCATCAAAGAGCTTATCGTCGAGCACCTTGAC-GATGACAAGATCGCCAT 44714 Query 275481 CTTCCAAACTCCCCAGTTCTTCGAGCAGCGCA-ATGAGCAGAACTACGTGGAGAAGGGAG 275539 |||| | ||| ||||| ||| | | || ||||||||| | || ||| |||| | Sbjct 44715 TGTCCAGAGTCCACAGTTTTTC-CGTGTCACAGATGAGCAGACGTGGGTTGAGCAGGGGG 44773 Query 275540 CCGGCGCCGTCCAGGAGCTCTTCTATCG 275567 |||| || || ||||||||||| || Sbjct 44774 CCGGTGCTACGCAAGAGCTCTTCTACCG 44801 >seq4397 Length=44488 Score = 86.0 bits (94), Expect = 1e-11 Identities = 128/182 (70%), Gaps = 0/182 (0%) Strand=Plus/Minus Query 224978 TACCGCCACTGGATGTACTGGTTGGGGGTCATGTCCAGGTGGTTCTCAATATGGTGGAAA 225037 || |||||||| | |||||||||||| ||| | |||||||| |||| | || | | Sbjct 8176 TAGCGCCACTGCAGGTACTGGTTGGGCGTCTTCTCCAGGTGCATCTCGACGTGTTCCAGG 8117 Query 225038 GCATGCTGGGCTACGTACGCCATGCGCATGTTGGGATGCTTCCACACAGAGCCCCGAGTC 225097 || ||||| | ||| | || |||| ||||| |||||| || || | | Sbjct 8116 GCGTGCTGCTTGATGTATCCGATACGCAGATTGGGGTGCTTCTCGACCTTTCCGGTACTT 8057 Query 225098 GGTTGTGCCTCGCCGGTGAGGACCTTGATGAGCGTAGTCTTGCCCGCACCATTGGGGCCA 225157 || | |||||||||||| | ||||||||| || | |||||| ||||| ||||| ||| Sbjct 8056 GGGATGGTCTCGCCGGTGAGCAGCTTGATGAGAGTCGACTTGCCAGCACCGTTGGGACCA 7997 Query 225158 AT 225159 || Sbjct 7996 AT 7995 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 921548497403800