Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chrysoporthe_20austroafricana_20[genbank_20GCA_5F001051155.1_202015-
07-09] 6,415 sequences; 44,668,886 total letters
Query= NC_009898.1
Length=368683
Score E
Sequences producing significant alignments: (Bits) Value
seq373 125 2e-23
seq1214 122 2e-22
seq3478 102 2e-16
seq2574 100 7e-16
>seq373
Length=59380
Score = 125 bits (138), Expect = 2e-23
Identities = 145/194 (75%), Gaps = 6/194 (3%)
Strand=Plus/Minus
Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342
|| || ||||| || ||||| | ||||| || |||||||| | || || || ||||||
Sbjct 232 TCCTTCTGGATGTTGTAGTCAGACAGCGTCCGGCCGTCTTCCAGCTGCTTGCCCGCGAAG 173
Query 288343 ATCAGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACG 288399
|| |||||||| || |||||| || || || || || || || || || ||||||
Sbjct 172 ATAAGACGCTGCTGG---TCTGGGGGAATACCCTCCTTGTCTTGAATCTTGGCCTTCACG 116
Query 288400 TTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTG 288459
|| || || | ||| ||||| || ||||| ||||||||||| || ||||| ||||||
Sbjct 115 TTGTCGATCGTATCCGATGATTCCACCTCGAGGGTGATCGTCTTGCCCGTCAGGGTCTTG 56
Query 288460 ACGAATATCTGCAT 288473
||||| || |||||
Sbjct 55 ACGAAGATTTGCAT 42
>seq1214
Length=170273
Score = 122 bits (134), Expect = 2e-22
Identities = 168/234 (72%), Gaps = 6/234 (3%)
Strand=Plus/Plus
Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306
||||| || || | || || || || | ||| || || ||||| || ||||||| |
Sbjct 100661 CCACCACGCAGGCGCAGGACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAG 100720
Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366
|| || || ||||| || | || || || ||||||||||| |||||||| ||||||
Sbjct 100721 AGGGTACGGCCGTCCTCGAGCTGCTTGCCAGCGAAGATCAGGCGCTGTTG---GTCTGGG 100777
Query 288367 ---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCT 288423
|| || || || |||||||| || || || || || || || | ||| || ||
Sbjct 100778 GGAATACCCTCCTTGTCCTGGATCTTGGCCTTGACATTGTCGATGGTGTCGGAAGACTCC 100837
Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATTATG 288477
|| || || ||||| ||||| || || || ||||||||||| |||||||| |||
Sbjct 100838 ACCTCAAGGGTGATAGTCTTGCCCGTGAGGGTCTTGACGAAGATCTGCATGATG 100891
>seq3478
Length=17986
Score = 102 bits (112), Expect = 2e-16
Identities = 137/191 (72%), Gaps = 0/191 (0%)
Strand=Plus/Plus
Query 269150 TGATCGGTATGAATGCCGATCTCATGAATCAATATATCGAATTCGTGGCTGATCGTATCT 269209
|| |||| ||||||||| | | ||||| || || ||||||||||| || || ||| ||
Sbjct 8528 TGCTCGGCATGAATGCCAACTTGATGAAGCAGTACATCGAATTCGTCGCCGACCGTCTCC 8587
Query 269210 TCACGGCACTCGGTTATGAGAAAGTGTACAATTCGAAGAATCCCTTCGCCTTTATGGAAC 269269
|| || ||||| | ||||| | ||||| || | || || |||| ||| |||||
Sbjct 8588 TCGTCGCTCTCGGCAACGAGAAGATCTACAAGTCTACTAACCCTTTCGACTTCATGGAGA 8647
Query 269270 TAATTTCGCTCGAAGGAAAGACGAACTTCTTCGAAAAGCGTGTCAGCGACTATCAACGTC 269329
|| || || | || ||||| ||||||||||| |||||||| | ||||| ||
Sbjct 8648 ACATCTCCCTTGGCGGGAAGACCAACTTCTTCGAGAAGCGTGTTGGTGACTACCAGAAGG 8707
Query 269330 CTGGTGTAATG 269340
||||||| |||
Sbjct 8708 CTGGTGTCATG 8718
>seq2574
Length=14985
Score = 100 bits (110), Expect = 7e-16
Identities = 135/188 (72%), Gaps = 0/188 (0%)
Strand=Plus/Plus
Query 288286 TTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATC 288345
|| ||||| || ||||||| ||| ||||| || || || | || || || ||||| |||
Sbjct 3 TTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCCTCGAGCTGCTTGCCAGCGAAAATC 62
Query 288346 AGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCT 288405
|| ||||| || ||||| || || || |||||||| || || || || || ||
Sbjct 63 AGGCGCTGCTGGTCCGGAGGGATACCCTCCTTGTCCTGGATCTTGGCCTTGACATTGTCG 122
Query 288406 ATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAAT 288465
|| | || || || || || || ||||| ||||| || || || |||||||||||
Sbjct 123 ATGGTGTCAGAGGACTCGACCTCAAGAGTGATGGTCTTGCCAGTGAGGGTCTTGACGAAG 182
Query 288466 ATCTGCAT 288473
||||||||
Sbjct 183 ATCTGCAT 190
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1179557441624370
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |