Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chrysoporthe_20austroafricana_20[genbank_20GCA_5F001051155.1_202015- 07-09] 6,415 sequences; 44,668,886 total letters Query= NC_009899.1 Length=344691 Score E Sequences producing significant alignments: (Bits) Value seq3478 111 3e-19 >seq3478 Length=17986 Score = 111 bits (122), Expect = 3e-19 Identities = 271/405 (67%), Gaps = 8/405 (2%) Strand=Plus/Plus Query 243353 CCATCTTTTGGCTGCGGAACAAAGGTGTGATGCCTGGCCTCGGTCTGTCTAACGAGTTCA 243412 ||||||| |||||| ||| ||| ||||||||||||| | || ||||| ||| Sbjct 8318 CCATCTTCTGGCTGAAGAAGCGTGGTCTGATGCCTGGCCTGACCTTCTCCAACGAACTCA 8377 Query 243413 TCAGTCGCGACGAGGGCCTTCACCAACAGTTCGGTGAGCTTA-TGTATTCAAAGCTCCAG 243471 || ||| |||||||| || ||| | |||| |||| ||| ||| | || | Sbjct 8378 TCTCTCGTGACGAGGGTCTGCACACTGACTTCGCCT-GCTTGCTGTTCTCACACCT---G 8433 Query 243472 AACAAGCTACCATTCGA--AACG-GTCAAACAAATCATCACAGAAGCAGTTGAAAACGAA 243528 ||||| | || | | | || || || ||||| || || || |||| | || Sbjct 8434 AACAACCGCCCCAGCAAGCAGCGCGTGGAAGCCATCATTACCGATGCTGTTGCCATTGAG 8493 Query 243529 AAGGAATTCATTTGCGACGCTATTCCATGCCGGCTTATTGGCATGAACTCTGAACTCATG 243588 ||||| ||| | ||| || | || || || | |||||||| | | | ||| Sbjct 8494 AAGGAGTTCCTGACCGAGGCCTTGCCCTGTGCCCTGCTCGGCATGAATGCCAACTTGATG 8553 Query 243589 GGACAGTACATCGAATTCGTAGCCGACCGCATTTTCATCGCGCTTGGTTATGAGAAAGTG 243648 ||||||||||||||||| |||||||| | || |||| || || | ||||| | Sbjct 8554 AAGCAGTACATCGAATTCGTCGCCGACCGTCTCCTCGTCGCTCTCGGCAACGAGAAGATC 8613 Query 243649 TACAACTCCAAGAACCCCTTTGCCTTTATGGAGCTCATTTCGCTTCAAGGGAAAACTAAC 243708 ||||| || | ||||| || | ||| |||||| ||| || ||| ||||| || ||| Sbjct 8614 TACAAGTCTACTAACCCTTTCGACTTCATGGAGAACATCTCCCTTGGCGGGAAGACCAAC 8673 Query 243709 TTCTTCGAAAAGCGTGTCAGTGATTATCAACGCCCTGGTGTGATG 243753 |||||||| |||||||| |||| || || ||||||| ||| Sbjct 8674 TTCTTCGAGAAGCGTGTTGGTGACTACCAGAAGGCTGGTGTCATG 8718 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1102789351880250