Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chrysoporthe_20austroafricana_20[genbank_20GCA_5F001051155.1_202015- 07-09] 6,415 sequences; 44,668,886 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq638 205 9e-48 seq1214 104 2e-17 seq373 84.2 2e-11 >seq638 Length=259535 Score = 205 bits (226), Expect = 9e-48 Identities = 965/1515 (64%), Gaps = 46/1515 (3%) Strand=Plus/Minus Query 153030 TTGACCACTTGAAACTCGCCCGCCAACACTCGTCTCAAATATACATTGCTAGTGAAAGGT 153089 ||||| ||||| |||||||| || | ||| || | | ||| | ||| || | || Sbjct 7566 TTGACAACTTGGAACTCGCCAGCGAGCACGCGGCGCTGATAGATGTTGGATGTATAGGGC 7507 Query 153090 TCAAAGGATTCGTTATTGCCTAGTATTTGAGCCGTGGTTGCGGTCGGCATGTACGCCACC 153149 |||||| | ||||| ||||| || || || | || | || || |||||| ||||| | Sbjct 7506 TCAAAGCACTCGTTGTTGCCCAGGATCTGCGAAGTCGAGGCAGTGGGCATGGGCGCCATC 7447 Query 153150 AACAAAGAATTCCGCAAGCCGTGC-GCTCGAATGTCGTCCTTCAACGCCTGCCAATCCCA 153208 ||||| || || | |||||| ||| || | | | ||||||| || | ||| ||||| Sbjct 7446 AACAAGCTGTTGCGGACACCGTGCTGCTTGA-TCTTGGCCTTCAAGGCGTCCCAGTCCCA 7388 Query 153209 CAGCGCCGACGGTGTCGC---GTTCCACATGTCGTACTGTAACACTCCTCGACTGGCGGG 153265 || | || || | | |||||||||||||||||| | | || | | |||| Sbjct 7387 GAGATCAGAGGGCTTGACATTGTTCCACATGTCGTACTGCAGGATACCCTGGGAGACGGG 7328 Query 153266 ACTGCCGGCAAACGTACTGTAGCTGCCGTCGCGTTGGGCCAGTTCGCAGCTAGCCTCGAG 153325 | || | | | |||| ||| || | ||| | || || || ||| Sbjct 7327 AGATCCCTCGTATGATGAGTAGGGGCCATCAACCTTGGCAATGTCACACGATGCGGTGAG 7268 Query 153326 CGCGCCATAGTATATGGTTTCGGCGATTTGTTTATTGAGAACGGCCGCTTCTTCGCTCTC 153385 ||| | | ||| ||||| ||| ||| || || || || | || || ||| Sbjct 7267 GGCGGCGTGGTAGATGGTCTCGAAGATCTGCTTGTTCAGCTCACGAGCCTCAGGTGACTC 7208 Query 153386 GTACGGCATGCGCAGCAGCACAAAGGCGTCGGCCAGACCCTGGATACCGACGCCGATGGG 153445 | | |||||||| || || || || |||||||||||||||| || ||||| || || Sbjct 7207 GAAAGGCATGCGGAGGGCCAAGAAAGCATCGGCCAGACCCTGGACGCCCACGCCAATAGG 7148 Query 153446 TCGATGCTTCTCGTTGCTGCGCCTCGCG---CTC-GCTATGGGATAGTGATTGCGATCGA 153501 || || | |||||| || ||| ||| | | |||||||| ||| ||||| Sbjct 7147 ACGGTGGCGCATGTTGCT----CTTGCGGGCCTCCGGAACAGGATAGTGGTTGATATCGA 7092 Query 153502 TAATTTTGTTGAGGTTGCGCACCACCACTTTAGTTATCGCCTTAAGTTTCTCGAAATCAT 153561 | || ||||| |||||||| || || || | || | | | || || ||| | || Sbjct 7091 TGATCTTGTTCAGGTTGCGAACGACGACCTGGGTGACTTCATGCAGCAACTGGAAGTTAT 7032 Query 153562 AGG--TCATT-TCGTCGACGCGTACGCATCGATTCACGGCAATAGACGCCAGATTACAGA 153618 || ||||| |||| | || ||| | | || ||| ||||||||||| || |||| Sbjct 7031 AGCGCTCATTCTCGTAGTCG---ACGAACTGTGGCAGGGCGATAGACGCCAGGTTGCAGA 6975 Query 153619 CGGCCGTCTCTTCGGCGTCGCTGTACTGCACGATCTCGGCGCAGAGGTTGCTGCATTTTA 153678 | || ||| || | | |||| | |||||| | ||| |||||| || | Sbjct 6974 CAGCAACCTCATCAGGAGCAGAATACTCGATGATCTCAGTGCAAAGGTTGGAGCTGCGAA 6915 Query 153679 TGACGCCCAAATTTTGCTGATTGCTTTTGCGATTGCACGCG-TCTTTGAAGAGCATGTAC 153737 || ||| | || | ||| ||||| ||||| ||| || | || ||| | | |||| | Sbjct 6914 TGGTGCCAAGGTTCTTCTGGTTGCTCTTGCGGTTGG-CGTGATCCTTGTACAACATGAAG 6856 Query 153738 GGTCCGCCGGTCTCGACTTGCGTTTCGACGAT---AAACCTATGCAGGTCCTGCGCTCGC 153794 || ||| |||||| ||| | |||| ||| | ||| || | |||||| | Sbjct 6855 GGGTTGCCTGTCTCGGTTTGAGCCTCGAGGATGGCATACCAGAGC---TTCTGCGCCTTC 6799 Query 153795 ACCCGCTGCCGATAGCGGCCCTCGCTCTCGTATCGCTCGTACAGTCGCTCAAACTCGTCG 153854 | || | ||| ||||||| |||||| ||||||||| ||| ||||| ||| Sbjct 6798 AGGGTCTTTTGGCCGCGACCCTCGCGCTCGTACTTCTCGTACAGAGCCTCGAACTCCTCG 6739 Query 153855 CCGTAGCAGTCGGCGAGGCCGGGACACTGATGCGGACACATCAGCGACCACATATCGTCG 153914 |||||||||||||| |||||||| |||| | || |||||||| | ||| |||| Sbjct 6738 CCGTAGCAGTCGGCAAGGCCGGGGCACTCGTTGGGGCACATCAGAGTCCA------GTCG 6685 Query 153915 GCGTT------GACGCGTCGCATGAACAGATCCGGCACCCAGAGCGCGTACATGAGGTCG 153968 |||| || || |||||| |||||||| | |||||| || | |||||| Sbjct 6684 CCGTTCTTCTCTACACGCTTCATGAAGAGATCCGGGATCCAGAGGGCAAGGAAGAGGTCA 6625 Query 153969 CGCGCCTTGCAATCCTCCGCGCCCATGTTGCGTTTCAGATTGA-GCACGCTATAGATGTC 154027 || || | || ||| || ||| ||| | || | || | | ||| || Sbjct 6624 CGAGCACGGACCTCTTCCTTTCCGTGGTTCTTCCGCAGGTCGAGGAACTCGA-AGACATC 6566 Query 154028 GGCGTGCCAGGGTTCAATGTAGACGGCCAGGGCACCTTTACGC---TTTCCGCCCTGATC 154084 |||||||| || || | ||||| ||| | ||||| ||| || || |||||||| Sbjct 6565 AGCGTGCCATGGCTCCAGGTAGATGGCAAAAGCACCGGGGCGCTTATTGCCACCCTGATC 6506 Query 154085 GACGTGGCGCACCATATTGTTGAAGACGCGCACCATGGGTTCCAGGCCGCTTGCGGTGCC 154144 ||||| || | | ||||||||||| |||| ||| || | ||| | | ||||| Sbjct 6505 GACGTATCGGGCAGTGTTGTTGAAGACACGCAACATAGGGATGATGCCATTGGACGTGCC 6446 Query 154145 GTTGGTCGAATTGATCTTGCTGCCGCGGGCGCGCACTTGATGCACGTTAACGCCAATGCC 154204 |||||| | ||| | | |||| ||| || | | || ||||| | |||||||| Sbjct 6445 GTTGGTGCCAGCGATGTAGGAGCCGGTGGCACGGATGCGGTGGACGTTGAGACCAATGCC 6386 Query 154205 GCC-GCCGTACTTTGATATGGCAGCGCAGTCGCCCAGCGTCCTGTAGATGCCGTCGATGC 154263 || ||| | ||| || || || ||| ||| || |||||||| || |||| Sbjct 6385 TCCAGCCAT-CTTGGAGATCATGGCACAGGTCTTCAGGGTATCATAGATGCCCTCAATGC 6327 Query 154264 TATCGTCGCGGACGCCGAGCAAGAAACACGAACACATTTGCGGAATGCGCGTTCCCGCCG 154323 | || || | | | | | ||| ||||| ||| |||| |||| || || Sbjct 6326 TGTCCTCCTTCATGTCAACGAGGAAGCACGACGACAACTGCGCCTGAGGCGTGCCGGCAT 6267 Query 154324 AAAAGAGGGTGGGACTCGCGTGCGTAAACAGTTTTTGGCTCATCATGCGGTACGTTTCGA 154383 || || || || |||||| || || | || | | ||| | ||| || || | Sbjct 6266 TGAACAGCGTTGGCGACGCGTGTGTGAAGAACTTGTTGGACATGTAGTTGTAGGTCTCAA 6207 Query 154384 TGGCGTCTTCGATATCATCGCCGTGAATGCCGAGCGCGACGCGCATGAGCATGTGCTGCG 154443 | ||||| | || || ||||| | ||||| ||||| ||||||||||| | Sbjct 6206 GAACCCTCTCGATGTTGTCCCCCCAGATGCCAACAGCGACACGCATCAGCATGTGCTGTG 6147 Query 154444 GACGTTCGGCGACTCTATTGTCAATCTTCAAGAGATATCCATTTTCGAGGGTTTTGTAAC 154503 | || ||| ||||| || || | || | |||||| | |||||||| ||| | | Sbjct 6146 GCCGCTCGACGACTTTACCGTTGAGTTTGAGGAGATACGAACGCTCGAGGGTCTTGAAGC 6087 Query 154504 CGAAATACTTGTATT 154518 | || || | |||| Sbjct 6086 CAAAGTATTGATATT 6072 >seq1214 Length=170273 Score = 104 bits (114), Expect = 2e-17 Identities = 162/229 (71%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || || |||| |||| || | || | | | |||||||| || |||||||||||| Sbjct 100661 CCACCACGCAGGCGCAGGACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAG 100720 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | ||||| ||||||||| || || || | |||| || ||||||||||| || || Sbjct 100721 AGGGTACGGCCGTCCTCGAGCTGCTTGCCAGCGAAGATCAGGCGCTGTTGGTCTGGGGGA 100780 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTA-ATTGTTCCACGGTGTCGGTCGACTCCAC 138566 ||||| || ||||| ||| || || | |||| || | |||||||| |||||||| Sbjct 100781 ATACCCTCCTTGTCCTGGATCTTGGCCTTGACATTG-TCGATGGTGTCGGAAGACTCCAC 100839 Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCATG 138615 ||| | || | || || || || || || || || || ||||||||| Sbjct 100840 CTCAAGGGTGATAGTCTTGCCCGTGAGGGTCTTGACGAAGATCTGCATG 100888 >seq373 Length=59380 Score = 84.2 bits (92), Expect = 2e-11 Identities = 158/229 (69%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || || |||| ||||| || || || | | |||||||| || ||||||||||| | Sbjct 268 CCACCACGCAGACGCAGCACCAAGTGCAGTGTCGACTCCTTCTGGATGTTGTAGTCAGAC 209 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | || || ||| || || || || || | |||| |||||||| ||||| || || Sbjct 208 AGCGTCCGGCCGTCTTCCAGCTGCTTGCCCGCGAAGATAAGACGCTGCTGGTCTGGGGGA 149 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAA--TTGTTCCACGGTGTCGGTCGACTCCA 138565 ||||| || ||||| ||| | || | || | ||| || | || || | || |||| Sbjct 148 ATACCCTCCTTGTC-TTGAATCTTGGCCTTCACGTTG-TCGATCGTATCCGATGATTCCA 91 Query 138566 CCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 |||||| || | ||| || || ||||| || || || || || ||||| Sbjct 90 CCTCGAGGGTGATCGTCTTGCCCGTCAGGGTCTTGACGAAGATTTGCAT 42 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496222605958800