Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chrysoporthe_20austroafricana_20[genbank_20GCA_5F001051155.1_202015-
07-09] 6,415 sequences; 44,668,886 total letters
Query= NC_011616.1
Length=148634
Score E
Sequences producing significant alignments: (Bits) Value
seq6049 102 8e-17
seq1214 96.9 3e-15
seq373 93.3 4e-14
seq2574 91.5 1e-13
>seq6049
Length=106314
Score = 102 bits (112), Expect = 8e-17
Identities = 132/180 (73%), Gaps = 2/180 (1%)
Strand=Plus/Plus
Query 126926 TTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATC 126985
|| || || ||||| ||| | ||||| ||| || ||||| || || ||| |||||
Sbjct 70152 TTCTGGATGTTGTAGTCGGAAAGAGTGCGGCCATCCTCAAGCTGCTTGCCGGCGAAGATC 70211
Query 126986 AATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTGA-GTTGTTC 127044
|||||||| ||||| ||||| || |||||||||||| ||| || ||||| |||| ||
Sbjct 70212 AATCGCTGTTGATCCGGAGGGATACCCTCCTTGTCCTGGATCTTGGCCTTGACGTTG-TC 70270
Query 127045 GACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAA 127104
|| |||||| | | ||| || || | ||| | || ||||| ||||| || || || ||
Sbjct 70271 GATGGTGTCGGAAGACTCCACCTCAAGGGTGATAGTCTTGCCCGTCAGGGTCTTCACGAA 70330
>seq1214
Length=170273
Score = 96.9 bits (106), Expect = 3e-15
Identities = 160/231 (69%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 126884 GCTCCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCG 126943
|| ||||| || | |||| |||| || | || ||||| || || || ||||| |||
Sbjct 100658 GCACCACCACGCAGGCGCAGGACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCG 100717
Query 126944 CCCATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGA 127003
| || || || || ||||| || |||||| |||||| ||||| || || ||
Sbjct 100718 GAGAGGGTACGGCCGTCCTCGAGCTGCTTGCCAGCGAAGATCAGGCGCTGTTGGTCTGGG 100777
Query 127004 GGTATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCG 127063
|| || |||||||||||| ||| || ||||| | |||| |||||| | | |||
Sbjct 100778 GGAATACCCTCCTTGTCCTGGATCTTGGCCTTGACATTGTCGATGGTGTCGGAAGACTCC 100837
Query 127064 ACTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 127114
|| || | ||| | || ||||| || || || || || || |||||||||
Sbjct 100838 ACCTCAAGGGTGATAGTCTTGCCCGTGAGGGTCTTGACGAAGATCTGCATG 100888
>seq373
Length=59380
Score = 93.3 bits (102), Expect = 4e-14
Identities = 164/235 (70%), Gaps = 3/235 (1%)
Strand=Plus/Minus
Query 126880 TACTGCTCCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTA 126939
|||||| ||||| || | |||| |||||| || | || ||||| || || || |||||
Sbjct 274 TACTGC-CCACCACGCAGACGCAGCACCAAGTGCAGTGTCGACTCCTTCTGGATGTTGTA 216
Query 126940 ATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATC 126999
|| || ||| || || || ||||| || || ||| |||| | |||||||| ||
Sbjct 215 GTCAGACAGCGTCCGGCCGTCTTCCAGCTGCTTGCCCGCGAAGATAAGACGCTGCTGGTC 156
Query 127000 GGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTAC 127058
|| || || ||||||||||| || || ||| | |||| |||| || ||||
Sbjct 155 TGGGGGAATACCCTCCTTGTCTTGAATCTTGGCCTTCACGTTG-TCGATCGTATCCGATG 97
Query 127059 TCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113
|| || |||| ||| | ||| ||||| ||||| || || || || || |||||
Sbjct 96 ATTCCACCTCGAGGGTGATCGTCTTGCCCGTCAGGGTCTTGACGAAGATTTGCAT 42
>seq2574
Length=14985
Score = 91.5 bits (100), Expect = 1e-13
Identities = 133/188 (71%), Gaps = 0/188 (0%)
Strand=Plus/Plus
Query 126926 TTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATC 126985
|| || || ||||| ||| | ||||| ||| || ||||| || |||||| | |||
Sbjct 3 TTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCCTCGAGCTGCTTGCCAGCGAAAATC 62
Query 126986 AATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCG 127045
| |||||||| || ||||| || |||||||||||| ||| || ||||| | |||
Sbjct 63 AGGCGCTGCTGGTCCGGAGGGATACCCTCCTTGTCCTGGATCTTGGCCTTGACATTGTCG 122
Query 127046 ACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAA 127105
| |||||| | |||||| || | || | || ||||| || || || || || ||
Sbjct 123 ATGGTGTCAGAGGACTCGACCTCAAGAGTGATGGTCTTGCCAGTGAGGGTCTTGACGAAG 182
Query 127106 ATCTGCAT 127113
||||||||
Sbjct 183 ATCTGCAT 190
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 475462670779600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |