Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chrysoporthe_20austroafricana_20[genbank_20GCA_5F001051155.1_202015- 07-09] 6,415 sequences; 44,668,886 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq638 291 1e-73 seq3478 123 3e-23 >seq638 Length=259535 Score = 291 bits (322), Expect = 1e-73 Identities = 1110/1717 (65%), Gaps = 39/1717 (2%) Strand=Plus/Minus Query 115526 TGAACTGAATGGGTCTCGCCTTGGCCTTTGATCGGAGGTAGTACATCCCCGTCTTGAGCC 115585 |||||||||| || ||| |||| || |||||||||||||| || |||||||| | Sbjct 7904 TGAACTGAATCGGCGCTGCCGCTGCCTGTGTGCGGAGGTAGTACATGCCAGTCTTGAGAC 7845 Query 115586 CCTGCTTCCAGGCATACATATGCATTGAGGACAACTTGGAGAGTGTTGGACTTTC-CATG 115644 || ||||||| | | ||||| | | |||| | | || || | |||| Sbjct 7844 CCAGCTTCCAACCGGTGAAGTGCATGCTAGTGATCTTGCCCATAGAAGG-CTCACGCATG 7786 Query 115645 AAGAGGTTCATACTTTGGGATTGATCGATGAAGCGTCCCCGATCCGCCGCCATATCAATC 115704 | ||||| ||||| || ||||||||| || ||||| || ||||| | | Sbjct 7785 TGTATGTTCAGCGACTGGGACTGGTCGATGAAGGCACCACGATCGGCAGCCATCTGCACG 7726 Query 115705 ACATCCTTCATCTTGATTTCCCACACAGTTCTGTAGAGGTTCTTAATATCATCTGGGATA 115764 | | || | ||| ||||| || || |||||||| ||| || ||||||||||| Sbjct 7725 ATGGTCCTCTGCGAGATCTCCCAGACGGTCTTGTAGAGGGCCTTGATGTCATCTGGGATG 7666 Query 115765 TCCACGA-TATTTTGGATAGAGCCACCTGCCTTGACCATGAGATCCTTCATATCCTTTGA 115823 | ||| |||| |||||||||||| | | || ||| | | ||||| |||| || Sbjct 7665 -CTGCGAATATTCTGGATAGAGCCATCCTCAGCGATGATGCGGTTCTTCAGGTCCTCAGA 7607 Query 115824 CCAGAGACCAATCTTCTTGAGATCCTCCACGAGGTGCTTATTGACAACAACAAACTCACC 115883 ||| |||||| || | ||||||| | || ||||||||| ||||| || Sbjct 7606 CCACAGACCACACTGCACCAGATCCTTGAGCAGCCATGGATTGACAACTTGGAACTCGCC 7547 Query 115884 CGCGAGGGTGCGTCTCAGATAGATGTTGGTCGTGTATGGCTCAAAGCACTCATTGTTACC 115943 ||||| ||| | | |||||||||||| || || |||||||||||||| ||||| || Sbjct 7546 AGCGAGCACGCGGCGCTGATAGATGTTGGATGTATAGGGCTCAAAGCACTCGTTGTTGCC 7487 Query 115944 CAAGATTTGGGCTGTGGAGGCTGTGGGCATGGGTGCCATGAGAAGGCTGTTGCGGAGACC 116003 || ||| || | || ||||| ||||||||||| ||||| | | ||||||||||| ||| Sbjct 7486 CAGGATCTGCGAAGTCGAGGCAGTGGGCATGGGCGCCATCAACAAGCTGTTGCGGACACC 7427 Query 116004 CACCCCCCTAATGCGTTCCTTGAGGGCGTCCCAGTCGTAG----TTGAGCTTTGTCTCCC 116059 | | | || |||| | |||||||||||| || ||| | | | Sbjct 7426 GTGCTGCTTGATCTTGGCCTTCAAGGCGTCCCAGTCCCAGAGATCAGAGGGCT-TGACAT 7368 Query 116060 CCTCCCACATATCAAACTGGAGGATACCTTGGGACGCTGGCGATCCCTCAAATGTCTCAT 116119 | |||||| || |||| |||||||| ||||| | || |||||||| ||| | Sbjct 7367 TGTTCCACATGTCGTACTGCAGGATACCCTGGGAGACGGGAGATCCCTCGTATGATGAGT 7308 Query 116120 ATGGGCCCTCAACCTCCGCCAATTCGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTCT 116179 | ||||| ||||||| || | || | || |||||| ||||| || || |||| Sbjct 7307 AGGGGCCATCAACCTTGGCAATGTCACACGATGCGGTGAGGGCGGCGTGGTAGATGGTCT 7248 Query 116180 CAAAAATGCGAGCATTCATTGCCTTGGCCTCGTCGGAATC-AAACGC--GAGACGGCACA 116236 | || || | |||| | ||||| || || ||| || | | || || Sbjct 7247 CGAAGATCTGCTTGTTCAGCTCACGAGCCTCAGGTGACTCGAAAGGCATGCGGAGGGCCA 7188 Query 116237 AAATAAATACATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAG 116296 | || |||| || ||||| ||||| || | |||||| || || || | ||| || Sbjct 7187 A---GAAAGCATCGGCCAGACCCTGGACGCCCACGCCAATAGGACGGTGGCGCATGTTGC 7131 Query 116297 ACTTTCGAGCGGTCTCC---ACGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTT 116353 ||| || || |||| || ||||| || ||||||| | | | || || || Sbjct 7130 TCTTGCG---GGCCTCCGGAACAGGATAGTGGTTGATATCGATGATCTTGTTCAGGTTGC 7074 Query 116354 TGGTGACAACCTTTGTGATTTCATGAAGCTTTTCGTAATCAAAACTGCGAGTCTCTTCAT 116413 ||| |||| |||| |||||| ||| | | | | | | | | |||| | | Sbjct 7073 GAACGACGACCTGGGTGACTTCATGCAGCAACTGGAAGTTATAGCGCTCATTCTCGTAGT 7014 Query 116414 TGACATACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAG 116473 ||| ||| || |||||||| |||||||| || || |||| |||||| | ||| Sbjct 7013 CGACGAACTGTGGCAGGGCGATAGACGCCAGGTTGCAGACAGCAACCTCATCAGGAGCAG 6954 Query 116474 TGTACTCTATAATTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGAT 116533 ||||| || || || || || | || || || ||||||||| | |||||| || | Sbjct 6953 AATACTCGATGATCTCAGTGCAAAGGTTGGAGCTGCGAATGGTGCCAAGGTTCTTCTGGT 6894 Query 116534 TTGACTTTGTGTTACACGCATCCTTGTAGAGCATATATGGCGTCCCCGTCTCCGTTTGGG 116593 | ||| ||| ||||||||| | ||| | || | || ||||| ||||| | Sbjct 6893 TGCTCTTGCGGTTGGCGTGATCCTTGTACAACATGAAGGGGTTGCCTGTCTCGGTTTGAG 6834 Query 116594 ACTTGAGAATAGCCTTCCATA-CATCGGCGGCTGGCACAGTGGCGTT--GGCTCGCCCCT 116650 || ||| || || | ||| | | || ||| || ||| | | || | | || |||| Sbjct 6833 CCTCGAGGATGGCATACCAGAGCTTCTGCGCCT---TCAGGGTCTTTTGGCCGCGACCCT 6777 Query 116651 CCTCCTCGTACTTTGTGTAGAGGGCCTCAAACTCTTCACCCACAGC-CTCTGAGAGCCCT 116709 | ||||||||| ||| || ||||| ||||| || || ||| || | || || Sbjct 6776 CGCGCTCGTACTTCTCGTACAGAGCCTCGAACTCCTC-GCCGTAGCAGTCGGCAAGGCCG 6718 Query 116710 GGTGCCTTATCTGGACAGAAGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAG 116769 || || | || || | |||| ||| | || || ||| || |||||||||||| Sbjct 6717 GGGCACTCGTTGGGGCACATCAGAGTCCAGTCGCCGTTCTTCTCTACACGCTTCATGAAG 6658 Query 116770 AGGTCTGGGATCCAGAGCGCCGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGA 116829 || || ||||||||||| || |||||| || ||| || | ||||| | || || Sbjct 6657 AGATCCGGGATCCAGAGGGCAAGGAAGAGGTCACGAGCACGGACCTCTTCCTTTCCGTGG 6598 Query 116830 TTGAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCG 116889 || |||| || | || || | || ||| |||||||| || |||||||| | || Sbjct 6597 TTCTTCCGCAGGTCGAGGAACTCGAAGACATCAGCGTGCCATGGCTCCAGGTAGATGGCA 6538 Query 116890 ATTGACCCCTTGCG---ACGACCAGCCTGGTTTACATACCTCGCCGTTGCGTTAAATACG 116946 | | || ||| | ||| |||| | || || | || || ||| || || Sbjct 6537 AAAGCACCGGGGCGCTTATTGCCACCCTGATCGACGTATCGGGCAGTGTTGTTGAAGACA 6478 Query 116947 CGAAGCATTGGAATGATACCATCAGATTGGCCATTTGT-CCCCCGA-ATACGAGACTTGT 117004 || | ||| || ||||| |||| || ||| || || || ||| || ||| | | Sbjct 6477 CGCAACATAGGGATGATGCCATTGGACGTGCCGTTGGTGCCAGCGATGTAGGAGCC--GG 6420 Query 117005 TGGCTCTGACATCGTGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGTGCGC 117064 |||| | || ||||| || | |||||| || || ||| ||| ||||| || | Sbjct 6419 TGGCACGGATGCGGTGGACGTTGAGACCAATGCCTCCAGCCATCTTGGAGATCATGGCAC 6360 Query 117065 ACTCCGTGAGACTGCCGTAGATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGC 117124 | | | || | | ||||| || || || ||| |||| | | | |||||||| Sbjct 6359 AGGTCTTCAGGGTATCATAGATGCCCTCAATGCTGTCCTCCTTCATGTCAACGAGGAAGC 6300 Query 117125 AGCTCGACATTTGTGGCCTTGGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGA 117184 | ||||| || | | || || || || ||||| || ||||| | |||||| ||| Sbjct 6299 ACGACGACAACTGCGCCTGAGGCGTGCCGGCATTGAACAGCGTTGGCGACGCGTGTGTGA 6240 Query 117185 ACATACCT-TGGGACATCTTATCGTAGGTCTCCAAGA 117220 | | || | | |||||| | | |||||||| ||||| Sbjct 6239 AGA-ACTTGTTGGACATGTAGTTGTAGGTCT-CAAGA 6205 >seq3478 Length=17986 Score = 123 bits (136), Expect = 3e-23 Identities = 299/444 (67%), Gaps = 8/444 (2%) Strand=Plus/Minus Query 127231 GTAGTCCCCGACCCGCTTCTCGAAGAAGTTTGTCTTCCCATCGAGGCTGATATTCTCCAT 127290 |||||| || || ||||||||||||||||| |||||||| | ||| ||| |||||||| Sbjct 8700 GTAGTCACCAACACGCTTCTCGAAGAAGTTGGTCTTCCCGCCAAGGGAGATGTTCTCCAT 8641 Query 127291 AAAATCAAATGGGTTCTTTGAGTTCCAAATTGT-TGGCACCCCAATCTGTTTGAGGAGAC 127349 || || || ||||| | || || | || | | | || | | |||||||| Sbjct 8640 GAAGTCGAAAGGGTTAGTAGACTTGTAGATCTTCTCGTTGCCGAGAGCGAC-GAGGAGAC 8582 Query 127350 GATCCGAGACGTACTCAATGTACTCAGACATCTTCTCAGAGTTCATACCGATGAGGTTAC 127409 | || | |||| | || ||||||| |||| | | ||||| |||| ||| || Sbjct 8581 GGTCGGCGACGAATTCGATGTACTGCTTCATCAAGTTGGCATTCATGCCGAGCAGGGCAC 8522 Query 127410 ATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATGTCCACAGCTTCCCGTACGATGGCGT 127469 | || | || || | |||| ||||||||||| | ||||| || | |||||| | Sbjct 8521 AGGGCAAGGCCTCGGTCAGGAACTCCTTCTCAATGGCAACAGCATCGGTAATGATGGCTT 8462 Query 127470 GAATAGTGTCCACCCCAGGTCTATTGCGTAAAGTCTT-GAAGAGTTCCA-CAG-CAAACT 127526 | | | | || | ||| | | || | ||| || | | ||| | || | Sbjct 8461 CCACGCGCTGCTTGCTGGGGCGGTTGT-TCAGGTGTGAGAACAG--CAAGCAGGCGAAGT 8405 Query 127527 CTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGA 127586 | ||| |||||||||||||| ||||||||||| || |||||| ||| || ||||| | Sbjct 8404 CAGTGTGCAGACCCTCGTCACGAGAGATGAGTTCGTTGGAGAAGGTCAGGCCAGGCATCA 8345 Query 127587 GACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCA 127646 |||| |||||||||| |||||| || | | || | |||| |||||| || || || | Sbjct 8344 GACCACGCTTCTTCAGCCAGAAGATGGAAGCGAAAGCGCCACTGAAGAAAATACCTTCGA 8285 Query 127647 CACACGCGAACGCAAATAGACGCT 127670 || || || |||| || |||| Sbjct 8284 CAGCAGCAAATGCAACAAGGCGCT 8261 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613458004391400