Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chrysoporthe_20austroafricana_20[genbank_20GCA_5F001051155.1_202015-
07-09] 6,415 sequences; 44,668,886 total letters
Query= NC_013953.1
Length=156344
Score E
Sequences producing significant alignments: (Bits) Value
seq1214 145 8e-30
seq3478 141 9e-29
seq373 138 1e-27
seq2574 123 2e-23
seq6049 96.9 3e-15
>seq1214
Length=170273
Score = 145 bits (160), Expect = 8e-30
Identities = 161/215 (75%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
||||| || ||||| || || ||||||||||| || |||||| | || || ||| | ||
Sbjct 100887 ATGCAGATCTTCGTCAAGACCCTCACGGGCAAGACTATCACCCTTGAGGTGGAGTCTTCC 100828
Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363
|||| | | | | | || | || |||| ||||| ||||| |||||| | ||||||
Sbjct 100827 GACACCATCGACAATGTCAAGGCCAAGATCCAGGACAAGGAGGGTATTCCCCCAGACCAA 100768
Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423
||||| || || | ||| ||||| ||||| || |||| || |||||| ||||||||||
Sbjct 100767 CAGCGCCTGATCTTCGCTGGCAAGCAGCTCGAGGACGGCCGTACCCTCTCCGACTACAAC 100708
Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCG 38458
||||| ||||| | || ||||| |||| |||||
Sbjct 100707 ATCCAGAAGGAGTCCACCCTGCACCTGGTCCTGCG 100673
>seq3478
Length=17986
Score = 141 bits (156), Expect = 9e-29
Identities = 331/486 (68%), Gaps = 20/486 (4%)
Strand=Plus/Minus
Query 132625 TTCTCaaaaaaaTTAGTTTTTCCCTCCAAGGAA-ATGAGCGTCATAAAATCCAAGGGGTT 132683
||||| || || || || || ||| |||||| | ||| | ||| || || || |||||
Sbjct 8684 TTCTCGAAGAAGTTGGTCTT-CCCGCCAAGGGAGATGTTCTCCATGAAGTCGAAAGGGTT 8626
Query 132684 GGCTGTGTTGTAGTGCTT---GGTGCCGATCAGGTCGACGAGCAGCCTGTCGGCCACGAA 132740
| | |||||| ||| | |||||| || ||||||| || | |||||| |||||
Sbjct 8625 AGTAGACTTGTAGATCTTCTCGTTGCCGAG-AG--CGACGAGGAGACGGTCGGCGACGAA 8569
Query 132741 CTCGATGTATTGCGACATGGTTTCGCAATTAAGTCCCAGCAGACGCACCGG-CAGCGCTT 132799
|||||||| ||| ||| | | ||| | || ||||| |||| || || || |
Sbjct 8568 TTCGATGTACTGCTTCATCAAGTTGGCATTCATGCCGAGCAGG-GCACAGGGCAAGGCCT 8510
Query 132800 CGGTGAGAAAGCGTTGCTCGATGGCGACCGCGTCGGTGACGAT---TTCCCTAACGCGCG 132856
|||| || || | ||| ||||| || || ||||| | ||| |||| ||||||
Sbjct 8509 CGGTCAGGAACTCCTTCTCAATGGCAACAGCATCGGTAATGATGGCTTCC---ACGCGCT 8453
Query 132857 CCGCGCTCGGCCGTTGCACCAAATGCTTGAACATCAAGCAAGCAAAGTCGCAATGCAAGC 132916
| ||| || || | || || ||||| |||||| || ||||| |||| |
Sbjct 8452 GCTTGCTGGGGCGGTTGTTCAGGTGTGAGAACAGCAAGCAGGCGAAGTCAGTGTGCAGAC 8393
Query 132917 CCTCGTCCCTGGAAATGAGTTCGTTGCTGAAAGTCAAGCCGGGCATGAGGCCGCGTTTTT 132976
||||||| | || |||||||||||| ||| |||| ||| ||||| || || || || |
Sbjct 8392 CCTCGTCACGAGAGATGAGTTCGTTGGAGAAGGTCAGGCCAGGCATCAGACCACGCTTCT 8333
Query 132977 TGAGCCAAAATATGGCGGCGAAACTGCCCGAAAAGAAGACGCCCTCGACGGCCGCGAAAG 133036
| ||||| || |||| |||||| ||| ||||| | || ||||| || || || |
Sbjct 8332 TCAGCCAGAAGATGGAAGCGAAAGCGCCACTGAAGAAAATACCTTCGACAGCAGCAAATG 8273
Query 133037 CCACCAGGCGCTCGCCGAACGT-GGCT-TCTTTGCTGGCGATCCAGCGCAGCGCCCATTC 133094
| || ||||||| || | || | || | | ||| |||||| | ||| ||||| ||
Sbjct 8272 CAACAAGGCGCTGAGCGTAGGTAGACTCACGGTCCTG--GATCCACCTCAGAGCCCAGTC 8215
Query 133095 GGCCTT 133100
||||||
Sbjct 8214 GGCCTT 8209
Score = 131 bits (144), Expect = 2e-25
Identities = 178/248 (72%), Gaps = 3/248 (1%)
Strand=Plus/Minus
Query 133195 TCCGAGTGTACGTTCTCCATGGCGATTTGAAAGCCGTAAAAGCACCGCGCCTCGACCACC 133254
|| ||||| | ||||||||| | | || |||||||| || || || ||||| | |
Sbjct 8057 TCGGAGTGGATGTTCTCCATCATGGTCTGGAAGCCGTAGAAACAACGGGCCTCAGGAATC 7998
Query 133255 TGCACTTCTTGAGCGAAACGCTCGACCAGATTTTCGTTGACGATGCCGTCGCTGGCGGCG 133314
|| || || | ||| ||||||| || |||||||| ||||||||||| |||||
Sbjct 7997 TGGACCTCAGCACTGAAGCGCTCGATCAAGTTTTCGTTAACGATGCCGTCCGAAGCGGCA 7938
Query 133315 AAAAAGGCCAGCACGTGCTTGATGAAATGGCGCTCGTTGTCGTTCAAGCG---CTCCCAG 133371
|| ||||| || | ||| |||||| | ||||| ||| |||| || | ||||
Sbjct 7937 AAGAAGGCGAGGATGTGGGAGATGAAGTATTTCTCGTCATCGGTCAAACGGTTGTTCCAG 7878
Query 133372 TCGCGCGTGTCCTTGGACAGGTCCACCTCCTCGACGGTCCAAAACGACGCCTCGGCTTTT 133431
||| || |||||| |||||||| | |||||| ||||||| || ||||||||| ||
Sbjct 7877 TCGTGCAGGTCCTTAGACAGGTCAATCTCCTCAGCGGTCCAGAAGGACGCCTCGTGCTTC 7818
Query 133432 TTGTACAT 133439
||||||||
Sbjct 7817 TTGTACAT 7810
>seq373
Length=59380
Score = 138 bits (152), Expect = 1e-27
Identities = 169/228 (74%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
|||||||| ||||| || || || |||||||| || |||||| |||| || || | |
Sbjct 42 ATGCAAATCTTCGTCAAGACCCTGACGGGCAAGACGATCACCCTCGAGGTGGAATCATCG 101
Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362
|| | | | |||| | || | || || | ||||| ||||| |||||| | |||||
Sbjct 102 GATACGATCGACAACG-TGAAGGCCAAGATTCAAGACAAGGAGGGTATTCCCCCAGACCA 160
Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422
||||| || || | ||||||||| |||||||| |||| || || || ||||||||
Sbjct 161 GCAGCGTCTTATCTTCGCGGGCAAGCAGCTGGAAGACGGCCGGACGCTGTCTGACTACAA 220
Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470
|||||| ||||| |||| ||||| |||||||||||| || | || ||
Sbjct 221 CATCCAGAAGGAGTCGACACTGCACTTGGTGCTGCGTCTGCGTGGTGG 268
>seq2574
Length=14985
Score = 123 bits (136), Expect = 2e-23
Identities = 143/193 (74%), Gaps = 0/193 (0%)
Strand=Plus/Minus
Query 38241 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCC 38300
|| ||||| || ||||| || || ||||| ||||| |||||||| | || |||||| ||
Sbjct 193 AAGATGCAGATCTTCGTCAAGACCCTCACTGGCAAGACCATCACTCTTGAGGTCGAGTCC 134
Query 38301 ACCGACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGAC 38360
| |||| | | | | | || | || |||| ||||| ||||| || || | |||
Sbjct 133 TCTGACACCATCGACAATGTCAAGGCCAAGATCCAGGACAAGGAGGGTATCCCTCCGGAC 74
Query 38361 CAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTAC 38420
|| ||||| || |||| ||| ||||| ||||| || || | ||||||||| |||||||
Sbjct 73 CAGCAGCGCCTGATTTTCGCTGGCAAGCAGCTCGAGGATGGCCGCACCCTCTCCGACTAC 14
Query 38421 AACATCCAAAAGG 38433
|||||||| ||||
Sbjct 13 AACATCCAGAAGG 1
>seq6049
Length=106314
Score = 96.9 bits (106), Expect = 3e-15
Identities = 132/182 (73%), Gaps = 2/182 (1%)
Strand=Plus/Minus
Query 38253 TTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTG 38312
||||| || || || |||||||| || |||||| | || || ||| | |||||| | |
Sbjct 70330 TTCGTGAAGACCCTGACGGGCAAGACTATCACCCTTGAGGTGGAGTCTTCCGACACCATC 70271
Query 38313 CA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCT 38371
| |||| | || | || |||| ||||| ||||| || || | || |||||||| |
Sbjct 70270 GACAACG-TCAAGGCCAAGATCCAGGACAAGGAGGGTATCCCTCCGGATCAACAGCGATT 70212
Query 38372 CATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAA 38431
|| | ||| ||||| ||||| || || | ||||| || ||||||||||||||| ||
Sbjct 70211 GATCTTCGCCGGCAAGCAGCTTGAGGATGGCCGCACTCTTTCCGACTACAACATCCAGAA 70152
Query 38432 GG 38433
||
Sbjct 70151 GG 70150
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 500132692393600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |